RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
CTNND1-232ENST00000532649 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 CCDC34Q96HJ3 373 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 RASSF8Q8NHQ8 419 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
CTNND1-232ENST00000532649 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
CTNND1-232ENST00000532649 GOLGA6L1Q8N7Z2 621 aa10.86□□□□□ -0.67
CTNND1-232ENST00000532649 SYTL4Q96C24 671 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-232ENST00000532649 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-232ENST00000532649 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
CTNND1-232ENST00000532649 APAF1O14727 1248 aa10.86□□□□□ -0.67
CTNND1-232ENST00000532649 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
CTNND1-232ENST00000532649 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
CTNND1-232ENST00000532649 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 USP35Q9P2H5 1018 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 CUL7Q14999 1698 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
CTNND1-232ENST00000532649 MARCH6O60337 910 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 UNC13AQ9UPW8 1703 aa10.85□□□□□ -0.67
CTNND1-232ENST00000532649 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
CTNND1-232ENST00000532649 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-232ENST00000532649 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
CTNND1-232ENST00000532649 E9PSI1 815 aa10.84□□□□□ -0.67
CTNND1-232ENST00000532649 MSH5O43196 834 aa10.84□□□□□ -0.67
CTNND1-232ENST00000532649 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-232ENST00000532649 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
CTNND1-232ENST00000532649 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
CTNND1-232ENST00000532649 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-232ENST00000532649 FRAT2O75474 233 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-232ENST00000532649 RIPK4P57078 832 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 NLRP6P59044 892 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-232ENST00000532649 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 DAPK1P53355 1430 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 PRAM1Q96QH2 718 aa10.83□□□□□ -0.68
CTNND1-232ENST00000532649 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
CTNND1-232ENST00000532649 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 HMOX1P09601 288 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 GPRASP1Q5JY77 1395 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 NLRP2Q9NX02 1062 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 KIAA1107Q9UPP5 1409 aa10.82□□□□□ -0.68
CTNND1-232ENST00000532649 CTDP1Q9Y5B0 961 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-232ENST00000532649 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
CTNND1-232ENST00000532649 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 ZKSCAN2Q63HK3 967 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 TCEAL9Q9UHQ7 104 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 ABTB2Q8N961 1025 aa10.81□□□□□ -0.68
CTNND1-232ENST00000532649 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-232ENST00000532649 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
CTNND1-232ENST00000532649 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
CTNND1-232ENST00000532649 CREBRFQ8IUR6 639 aa10.8□□□□□ -0.68
CTNND1-232ENST00000532649 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
CTNND1-232ENST00000532649 PTMSP20962 102 aa10.8□□□□□ -0.68
CTNND1-232ENST00000532649 PLIN1O60240 522 aa10.8□□□□□ -0.68
CTNND1-232ENST00000532649 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
CTNND1-232ENST00000532649 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
CTNND1-232ENST00000532649 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
CTNND1-232ENST00000532649 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-232ENST00000532649 CALRP27797 417 aaKnown RBP10.79□□□□□ -0.68
CTNND1-232ENST00000532649 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 C9orf78Q9NZ63 289 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-232ENST00000532649 ERBINQ96RT1 1412 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 SLC26A8Q96RN1 970 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 ZBED9Q6R2W3 1325 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 TPM3P06753 285 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 TRIM34Q9BYJ4 488 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 TSPYL4Q9UJ04 414 aa10.78□□□□□ -0.68
CTNND1-232ENST00000532649 CNTLNQ9NXG0 1405 aa10.77□□□□□ -0.69
CTNND1-232ENST00000532649 KIF14Q15058 1648 aa10.77□□□□□ -0.69
CTNND1-232ENST00000532649 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
CTNND1-232ENST00000532649 TOMM22Q9NS69 142 aa10.77□□□□□ -0.69
CTNND1-232ENST00000532649 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
CTNND1-232ENST00000532649 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
CTNND1-232ENST00000532649 DDX58O95786 925 aaKnown RBP10.76□□□□□ -0.69
CTNND1-232ENST00000532649 CDK19Q9BWU1 502 aa10.76□□□□□ -0.69
CTNND1-232ENST00000532649 MTHFSP49914 203 aa10.76□□□□□ -0.69
CTNND1-232ENST00000532649 SYAP1Q96A49 352 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-232ENST00000532649 FKBP5Q13451 457 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-232ENST00000532649 ANKRD45Q5TZF3 282 aa10.75□□□□□ -0.69
CTNND1-232ENST00000532649 ADGRL1O94910 1474 aa10.75□□□□□ -0.69
CTNND1-232ENST00000532649 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
CTNND1-232ENST00000532649 GNAI1P63096 354 aa10.75□□□□□ -0.69
CTNND1-232ENST00000532649 SETQ01105 290 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-232ENST00000532649 RILPL2Q969X0 211 aa10.75□□□□□ -0.69
CTNND1-232ENST00000532649 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
CTNND1-232ENST00000532649 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
CTNND1-232ENST00000532649 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms