RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
LINC00958-206ENST00000532541 KCNA6P17658 529 aa12.26□□□□□ -0.45
LINC00958-206ENST00000532541 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
LINC00958-206ENST00000532541 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
LINC00958-206ENST00000532541 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
LINC00958-206ENST00000532541 TET3O43151 1660 aa12.25□□□□□ -0.45
LINC00958-206ENST00000532541 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
LINC00958-206ENST00000532541 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
LINC00958-206ENST00000532541 MSH6P52701 1360 aa12.23□□□□□ -0.45
LINC00958-206ENST00000532541 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
LINC00958-206ENST00000532541 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
LINC00958-206ENST00000532541 UNC13BO14795 1591 aa12.22□□□□□ -0.45
LINC00958-206ENST00000532541 E9PCH4 1651 aa12.21□□□□□ -0.45
LINC00958-206ENST00000532541 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.46
LINC00958-206ENST00000532541 NUP155O75694 1391 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 NWD1Q149M9 1564 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
LINC00958-206ENST00000532541 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00958-206ENST00000532541 ZNF326Q5BKZ1 582 aaKnown RBP12.18□□□□□ -0.46
LINC00958-206ENST00000532541 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
LINC00958-206ENST00000532541 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
LINC00958-206ENST00000532541 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
LINC00958-206ENST00000532541 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
LINC00958-206ENST00000532541 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
LINC00958-206ENST00000532541 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
LINC00958-206ENST00000532541 ATF3P18847 181 aa12.15□□□□□ -0.46
LINC00958-206ENST00000532541 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
LINC00958-206ENST00000532541 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
LINC00958-206ENST00000532541 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
LINC00958-206ENST00000532541 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
LINC00958-206ENST00000532541 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
LINC00958-206ENST00000532541 TRPM2O94759 1503 aa12.11□□□□□ -0.47
LINC00958-206ENST00000532541 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
LINC00958-206ENST00000532541 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
LINC00958-206ENST00000532541 JCADQ9P266 1359 aa12.11□□□□□ -0.47
LINC00958-206ENST00000532541 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
LINC00958-206ENST00000532541 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
LINC00958-206ENST00000532541 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-206ENST00000532541 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-206ENST00000532541 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
LINC00958-206ENST00000532541 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
LINC00958-206ENST00000532541 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
LINC00958-206ENST00000532541 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
LINC00958-206ENST00000532541 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
LINC00958-206ENST00000532541 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
LINC00958-206ENST00000532541 PIK3R4Q99570 1358 aa12.07□□□□□ -0.48
LINC00958-206ENST00000532541 CLTCL1P53675 1640 aa12.06□□□□□ -0.48
LINC00958-206ENST00000532541 NCOA3Q9Y6Q9 1424 aa12.05□□□□□ -0.48
LINC00958-206ENST00000532541 LRP6O75581 1613 aa12.05□□□□□ -0.48
LINC00958-206ENST00000532541 NRXN3Q9Y4C0 1643 aa12.05□□□□□ -0.48
LINC00958-206ENST00000532541 BRINP3Q76B58 766 aa12.05□□□□□ -0.48
LINC00958-206ENST00000532541 METP08581 1390 aa12.05□□□□□ -0.48
LINC00958-206ENST00000532541 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
LINC00958-206ENST00000532541 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
LINC00958-206ENST00000532541 KIF1BO60333 1816 aa12.04□□□□□ -0.48
LINC00958-206ENST00000532541 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
LINC00958-206ENST00000532541 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
LINC00958-206ENST00000532541 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
LINC00958-206ENST00000532541 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
LINC00958-206ENST00000532541 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
LINC00958-206ENST00000532541 NAIPQ13075 1403 aa12.02□□□□□ -0.49
LINC00958-206ENST00000532541 NEXMIFQ5QGS0 1516 aa12.01□□□□□ -0.49
LINC00958-206ENST00000532541 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
LINC00958-206ENST00000532541 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
LINC00958-206ENST00000532541 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
LINC00958-206ENST00000532541 FOXD1Q16676 465 aa12□□□□□ -0.49
LINC00958-206ENST00000532541 MST1RQ04912 1400 aa12□□□□□ -0.49
LINC00958-206ENST00000532541 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
LINC00958-206ENST00000532541 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
LINC00958-206ENST00000532541 DCCP43146 1447 aa11.99□□□□□ -0.49
LINC00958-206ENST00000532541 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
LINC00958-206ENST00000532541 AFF2P51816 1311 aa11.98□□□□□ -0.49
LINC00958-206ENST00000532541 ADAMTS2O95450 1211 aa11.98□□□□□ -0.49
LINC00958-206ENST00000532541 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
LINC00958-206ENST00000532541 RXRBP28702 533 aa11.97□□□□□ -0.49
LINC00958-206ENST00000532541 NHSL1Q5SYE7 1610 aa11.97□□□□□ -0.49
LINC00958-206ENST00000532541 RGL3Q3MIN7 710 aa11.96□□□□□ -0.49
LINC00958-206ENST00000532541 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
LINC00958-206ENST00000532541 STK26Q9P289 416 aa11.96□□□□□ -0.49
LINC00958-206ENST00000532541 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
LINC00958-206ENST00000532541 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
LINC00958-206ENST00000532541 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
LINC00958-206ENST00000532541 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
LINC00958-206ENST00000532541 C1orf167Q5SNV9 1468 aa11.94□□□□□ -0.5
LINC00958-206ENST00000532541 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
LINC00958-206ENST00000532541 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
LINC00958-206ENST00000532541 NGLY1Q96IV0 654 aa11.93□□□□□ -0.5
LINC00958-206ENST00000532541 PPLO60437 1756 aa11.92□□□□□ -0.5
LINC00958-206ENST00000532541 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
LINC00958-206ENST00000532541 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
LINC00958-206ENST00000532541 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00958-206ENST00000532541 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
LINC00958-206ENST00000532541 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
LINC00958-206ENST00000532541 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
LINC00958-206ENST00000532541 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
LINC00958-206ENST00000532541 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
LINC00958-206ENST00000532541 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms