RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
PTPRK-221ENST00000532331 DNTTIP2Q5QJE6 756 aaKnown RBP14.18□□□□□ -0.14
PTPRK-221ENST00000532331 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 PRAM1Q96QH2 718 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 GOLGA6L4A6NEF3 574 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 MYBBP1AQ9BQG0 1328 aaKnown RBP14.17□□□□□ -0.14
PTPRK-221ENST00000532331 EIF2S2P20042 333 aaKnown RBP14.17□□□□□ -0.14
PTPRK-221ENST00000532331 CUL7Q14999 1698 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
PTPRK-221ENST00000532331 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
PTPRK-221ENST00000532331 RWDD1Q9H446 243 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-221ENST00000532331 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
PTPRK-221ENST00000532331 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
PTPRK-221ENST00000532331 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-221ENST00000532331 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
PTPRK-221ENST00000532331 HFM1A2PYH4 1435 aa14.14□□□□□ -0.15
PTPRK-221ENST00000532331 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
PTPRK-221ENST00000532331 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
PTPRK-221ENST00000532331 GNL2Q13823 731 aaKnown RBP14.13□□□□□ -0.15
PTPRK-221ENST00000532331 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
PTPRK-221ENST00000532331 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
PTPRK-221ENST00000532331 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
PTPRK-221ENST00000532331 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
PTPRK-221ENST00000532331 RPGRIP1LQ68CZ1 1315 aa14.12□□□□□ -0.15
PTPRK-221ENST00000532331 NRDCO43847 1150 aa14.12□□□□□ -0.15
PTPRK-221ENST00000532331 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
PTPRK-221ENST00000532331 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-221ENST00000532331 CLSTN1O94985 981 aa14.11□□□□□ -0.15
PTPRK-221ENST00000532331 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
PTPRK-221ENST00000532331 TOM1L2Q6ZVM7 507 aa14.11□□□□□ -0.15
PTPRK-221ENST00000532331 CLUAP1Q96AJ1 413 aa14.11□□□□□ -0.15
PTPRK-221ENST00000532331 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-221ENST00000532331 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
PTPRK-221ENST00000532331 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
PTPRK-221ENST00000532331 TRIM6-TRIM34B2RNG4 842 aa14.09□□□□□ -0.15
PTPRK-221ENST00000532331 CEBPAP49715 358 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-221ENST00000532331 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-221ENST00000532331 CDK19Q9BWU1 502 aa14.09□□□□□ -0.15
PTPRK-221ENST00000532331 C9orf78Q9NZ63 289 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-221ENST00000532331 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
PTPRK-221ENST00000532331 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
PTPRK-221ENST00000532331 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.15
PTPRK-221ENST00000532331 RIPK4P57078 832 aa14.08□□□□□ -0.16
PTPRK-221ENST00000532331 ERBINQ96RT1 1412 aa14.08□□□□□ -0.16
PTPRK-221ENST00000532331 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
PTPRK-221ENST00000532331 HMOX1P09601 288 aa14.08□□□□□ -0.16
PTPRK-221ENST00000532331 FBXW7Q969H0 707 aa14.08□□□□□ -0.16
PTPRK-221ENST00000532331 KIF14Q15058 1648 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-221ENST00000532331 CCDC141Q6ZP82 1450 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 TOMM22Q9NS69 142 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 RTEL1-TNFRSF6BF6WH68 1400 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 SUPT6HQ7KZ85 1726 aaKnown RBP14.07□□□□□ -0.16
PTPRK-221ENST00000532331 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
PTPRK-221ENST00000532331 VPS37DQ86XT2 251 aa14.06□□□□□ -0.16
PTPRK-221ENST00000532331 TRIM34Q9BYJ4 488 aa14.06□□□□□ -0.16
PTPRK-221ENST00000532331 RBM33Q96EV2 1170 aaKnown RBP14.06□□□□□ -0.16
PTPRK-221ENST00000532331 PPP1R1BQ9UD71 204 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-221ENST00000532331 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
PTPRK-221ENST00000532331 DAPK1P53355 1430 aa14.06□□□□□ -0.16
PTPRK-221ENST00000532331 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
PTPRK-221ENST00000532331 FANCAO15360 1455 aa14.04□□□□□ -0.16
PTPRK-221ENST00000532331 XPCQ01831 940 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-221ENST00000532331 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
PTPRK-221ENST00000532331 KIAA1107Q9UPP5 1409 aa14.03□□□□□ -0.16
PTPRK-221ENST00000532331 E9PSI1 815 aa14.03□□□□□ -0.16
PTPRK-221ENST00000532331 AMOTL1Q8IY63 956 aa14.03□□□□□ -0.16
PTPRK-221ENST00000532331 CABP1Q9NZU7 370 aa14.03□□□□□ -0.16
PTPRK-221ENST00000532331 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
PTPRK-221ENST00000532331 GAS2L2Q8NHY3 880 aa14.02□□□□□ -0.16
PTPRK-221ENST00000532331 APAF1O14727 1248 aa14.02□□□□□ -0.17
PTPRK-221ENST00000532331 RIC3Q7Z5B4 369 aa14.02□□□□□ -0.17
PTPRK-221ENST00000532331 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-221ENST00000532331 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
PTPRK-221ENST00000532331 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
PTPRK-221ENST00000532331 GNAI1P63096 354 aa14.01□□□□□ -0.17
PTPRK-221ENST00000532331 PTMSP20962 102 aa14.01□□□□□ -0.17
PTPRK-221ENST00000532331 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
PTPRK-221ENST00000532331 GBP4Q96PP9 640 aa14□□□□□ -0.17
PTPRK-221ENST00000532331 SPG7Q9UQ90 795 aa14□□□□□ -0.17
PTPRK-221ENST00000532331 TIAM1Q13009 1591 aa14□□□□□ -0.17
PTPRK-221ENST00000532331 LRRFIP1Q32MZ4 808 aaKnown RBP14□□□□□ -0.17
PTPRK-221ENST00000532331 FBXO31Q5XUX0 539 aaPredicted RBP14□□□□□ -0.17
PTPRK-221ENST00000532331 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
PTPRK-221ENST00000532331 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
PTPRK-221ENST00000532331 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
PTPRK-221ENST00000532331 RBM19Q9Y4C8 960 aaKnown RBP14□□□□□ -0.17
PTPRK-221ENST00000532331 ASXL2Q76L83 1435 aa13.99□□□□□ -0.17
PTPRK-221ENST00000532331 NAP1L5Q96NT1 182 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-221ENST00000532331 CTDP1Q9Y5B0 961 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-221ENST00000532331 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
PTPRK-221ENST00000532331 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
PTPRK-221ENST00000532331 KIF6Q6ZMV9 814 aa13.99□□□□□ -0.17
PTPRK-221ENST00000532331 CABP4P57796 275 aa13.98□□□□□ -0.17
PTPRK-221ENST00000532331 ADAMTS2O95450 1211 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms