RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 HFM1A2PYH4 1435 aa10.15□□□□□ -0.78
CTNND1-230ENST00000532245 TEX14Q8IWB6 1497 aa10.15□□□□□ -0.78
CTNND1-230ENST00000532245 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
CTNND1-230ENST00000532245 HMOX1P09601 288 aa10.15□□□□□ -0.79
CTNND1-230ENST00000532245 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.79
CTNND1-230ENST00000532245 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
CTNND1-230ENST00000532245 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
CTNND1-230ENST00000532245 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
CTNND1-230ENST00000532245 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-230ENST00000532245 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 NECTIN2Q92692 538 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 FGD1P98174 961 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 GORABQ5T7V8 394 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 DMRT2Q9Y5R5 561 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 ATP10BO94823 1461 aa10.13□□□□□ -0.79
CTNND1-230ENST00000532245 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
CTNND1-230ENST00000532245 IDI1Q13907 227 aa10.12□□□□□ -0.79
CTNND1-230ENST00000532245 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
CTNND1-230ENST00000532245 RPGRIP1LQ68CZ1 1315 aa10.12□□□□□ -0.79
CTNND1-230ENST00000532245 WAPLQ7Z5K2 1190 aa10.12□□□□□ -0.79
CTNND1-230ENST00000532245 ADAMTS12P58397 1594 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 RTEL1-TNFRSF6BF6WH68 1400 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
CTNND1-230ENST00000532245 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 PRDM11Q9NQV5 511 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 HSPA2P54652 639 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-230ENST00000532245 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
CTNND1-230ENST00000532245 ABCC5O15440 1437 aa10.1□□□□□ -0.79
CTNND1-230ENST00000532245 FRAT2O75474 233 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-230ENST00000532245 AMOTL2Q9Y2J4 779 aa10.1□□□□□ -0.79
CTNND1-230ENST00000532245 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
CTNND1-230ENST00000532245 B4GALNT3Q6L9W6 998 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 ADAMTS2O95450 1211 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 RIPK4P57078 832 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
CTNND1-230ENST00000532245 RCAN3Q9UKA8 241 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 RAPGEF6Q8TEU7 1601 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 ANKRD30BQ9BXX2 1392 aa10.09□□□□□ -0.79
CTNND1-230ENST00000532245 DDX54Q8TDD1 881 aaKnown RBP10.08□□□□□ -0.8
CTNND1-230ENST00000532245 PLCH2O75038 1416 aa10.08□□□□□ -0.8
CTNND1-230ENST00000532245 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
CTNND1-230ENST00000532245 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
CTNND1-230ENST00000532245 APAF1O14727 1248 aa10.08□□□□□ -0.8
CTNND1-230ENST00000532245 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
CTNND1-230ENST00000532245 TCERG1O14776 1098 aaKnown RBP10.07□□□□□ -0.8
CTNND1-230ENST00000532245 TNRQ92752 1358 aa10.07□□□□□ -0.8
CTNND1-230ENST00000532245 ZNF692Q9BU19 519 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-230ENST00000532245 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-230ENST00000532245 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
CTNND1-230ENST00000532245 PTPN23Q9H3S7 1636 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
CTNND1-230ENST00000532245 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
CTNND1-230ENST00000532245 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-230ENST00000532245 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 UBAP1LF5GYI3 381 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 FOXO3O43524 673 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
CTNND1-230ENST00000532245 MTHFSP49914 203 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-230ENST00000532245 NBPF8Q3BBV2 869 aa10.06□□□□□ -0.8
CTNND1-230ENST00000532245 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
CTNND1-230ENST00000532245 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-230ENST00000532245 GPATCH8Q9UKJ3 1502 aaKnown RBP10.05□□□□□ -0.8
CTNND1-230ENST00000532245 NEXNQ0ZGT2 675 aa10.05□□□□□ -0.8
CTNND1-230ENST00000532245 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
CTNND1-230ENST00000532245 NAIPQ13075 1403 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
CTNND1-230ENST00000532245 BECN1Q14457 450 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 NUP160Q12769 1436 aa10.04□□□□□ -0.8
CTNND1-230ENST00000532245 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
CTNND1-230ENST00000532245 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-230ENST00000532245 ANP32BQ92688 251 aaKnown RBP10.03□□□□□ -0.8
CTNND1-230ENST00000532245 NGLY1Q96IV0 654 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 ADGRF5Q8IZF2 1346 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 CCDC7Q96M83 1385 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 HMMRO75330 724 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
CTNND1-230ENST00000532245 ZNF518AQ6AHZ1 1483 aa10.03□□□□□ -0.8
CTNND1-230ENST00000532245 NCOA1Q15788 1441 aa10.02□□□□□ -0.8
CTNND1-230ENST00000532245 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.8
CTNND1-230ENST00000532245 FAM177BA6PVY3 158 aa10.02□□□□□ -0.81
CTNND1-230ENST00000532245 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-230ENST00000532245 UGGT2Q9NYU1 1516 aa10.02□□□□□ -0.81
CTNND1-230ENST00000532245 TRAPPC8Q9Y2L5 1435 aa10.02□□□□□ -0.81
CTNND1-230ENST00000532245 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
CTNND1-230ENST00000532245 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 RUNDC1Q96C34 613 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-230ENST00000532245 KDM5BQ9UGL1 1544 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 A2MP01023 1474 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 SYCP2Q9BX26 1530 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 TOM1O60784 492 aa10.01□□□□□ -0.81
CTNND1-230ENST00000532245 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms