RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
CHD7-211ENST00000532149 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
CHD7-211ENST00000532149 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
CHD7-211ENST00000532149 KIF1BO60333 1816 aa16.97■□□□□ 0.31
CHD7-211ENST00000532149 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
CHD7-211ENST00000532149 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
CHD7-211ENST00000532149 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
CHD7-211ENST00000532149 DIP2CQ9Y2E4 1556 aa16.96■□□□□ 0.31
CHD7-211ENST00000532149 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.3
CHD7-211ENST00000532149 MYOM2P54296 1465 aa16.95■□□□□ 0.3
CHD7-211ENST00000532149 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
CHD7-211ENST00000532149 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
CHD7-211ENST00000532149 AGLP35573 1532 aa16.94■□□□□ 0.3
CHD7-211ENST00000532149 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
CHD7-211ENST00000532149 CLTCL1P53675 1640 aa16.93■□□□□ 0.3
CHD7-211ENST00000532149 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
CHD7-211ENST00000532149 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
CHD7-211ENST00000532149 ABCC3O15438 1527 aa16.91■□□□□ 0.3
CHD7-211ENST00000532149 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
CHD7-211ENST00000532149 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
CHD7-211ENST00000532149 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
CHD7-211ENST00000532149 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
CHD7-211ENST00000532149 NOS1P29475 1434 aa16.88■□□□□ 0.29
CHD7-211ENST00000532149 ST20-MTHFSA0A0A6YYL1 179 aa16.88■□□□□ 0.29
CHD7-211ENST00000532149 GGT6Q6P531 493 aa16.88■□□□□ 0.29
CHD7-211ENST00000532149 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
CHD7-211ENST00000532149 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
CHD7-211ENST00000532149 NPATQ14207 1427 aa16.87■□□□□ 0.29
CHD7-211ENST00000532149 TMF1P82094 1093 aa16.87■□□□□ 0.29
CHD7-211ENST00000532149 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
CHD7-211ENST00000532149 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
CHD7-211ENST00000532149 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
CHD7-211ENST00000532149 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
CHD7-211ENST00000532149 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
CHD7-211ENST00000532149 IFT172Q9UG01 1749 aa16.84■□□□□ 0.29
CHD7-211ENST00000532149 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
CHD7-211ENST00000532149 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
CHD7-211ENST00000532149 ZFYVE9O95405 1425 aa16.82■□□□□ 0.28
CHD7-211ENST00000532149 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
CHD7-211ENST00000532149 RALBP1Q15311 655 aa16.82■□□□□ 0.28
CHD7-211ENST00000532149 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
CHD7-211ENST00000532149 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
CHD7-211ENST00000532149 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
CHD7-211ENST00000532149 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
CHD7-211ENST00000532149 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
CHD7-211ENST00000532149 SBNO2Q9Y2G9 1366 aa16.79■□□□□ 0.28
CHD7-211ENST00000532149 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
CHD7-211ENST00000532149 TESK2Q96S53 571 aa16.78■□□□□ 0.28
CHD7-211ENST00000532149 TSPOAP1O95153 1857 aa16.77■□□□□ 0.27
CHD7-211ENST00000532149 PPLO60437 1756 aa16.77■□□□□ 0.27
CHD7-211ENST00000532149 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
CHD7-211ENST00000532149 MKRN4PQ13434 485 aaPredicted RBP16.76■□□□□ 0.27
CHD7-211ENST00000532149 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
CHD7-211ENST00000532149 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
CHD7-211ENST00000532149 PIK3C2GO75747 1445 aa16.73■□□□□ 0.27
CHD7-211ENST00000532149 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
CHD7-211ENST00000532149 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
CHD7-211ENST00000532149 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
CHD7-211ENST00000532149 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
CHD7-211ENST00000532149 SYNMO15061 1565 aa16.71■□□□□ 0.27
CHD7-211ENST00000532149 MROH2AA6NES4 1674 aa16.7■□□□□ 0.26
CHD7-211ENST00000532149 INSRP06213 1382 aa16.7■□□□□ 0.26
CHD7-211ENST00000532149 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
CHD7-211ENST00000532149 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
CHD7-211ENST00000532149 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
CHD7-211ENST00000532149 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
CHD7-211ENST00000532149 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
CHD7-211ENST00000532149 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
CHD7-211ENST00000532149 CHGAP10645 457 aaKnown RBP16.68■□□□□ 0.26
CHD7-211ENST00000532149 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
CHD7-211ENST00000532149 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
CHD7-211ENST00000532149 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
CHD7-211ENST00000532149 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
CHD7-211ENST00000532149 SPATA31D1Q6ZQQ2 1576 aa16.67■□□□□ 0.26
CHD7-211ENST00000532149 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
CHD7-211ENST00000532149 PER1O15534 1290 aaPredicted RBP16.66■□□□□ 0.26
CHD7-211ENST00000532149 IDI1Q13907 227 aa16.66■□□□□ 0.26
CHD7-211ENST00000532149 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
CHD7-211ENST00000532149 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
CHD7-211ENST00000532149 CFAP70Q5T0N1 1121 aa16.65■□□□□ 0.26
CHD7-211ENST00000532149 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
CHD7-211ENST00000532149 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
CHD7-211ENST00000532149 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
CHD7-211ENST00000532149 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
CHD7-211ENST00000532149 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHD7-211ENST00000532149 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
CHD7-211ENST00000532149 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
CHD7-211ENST00000532149 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
CHD7-211ENST00000532149 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
CHD7-211ENST00000532149 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
CHD7-211ENST00000532149 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
CHD7-211ENST00000532149 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
CHD7-211ENST00000532149 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
CHD7-211ENST00000532149 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
CHD7-211ENST00000532149 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
CHD7-211ENST00000532149 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD7-211ENST00000532149 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
CHD7-211ENST00000532149 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
CHD7-211ENST00000532149 PANK3Q9H999 370 aa16.6■□□□□ 0.25
CHD7-211ENST00000532149 NINLQ9Y2I6 1382 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms