RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 OS9Q13438 667 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF12-211ENST00000531616 AAMPQ13685 434 aa11.05□□□□□ -0.64
ARHGEF12-211ENST00000531616 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
ARHGEF12-211ENST00000531616 SBNO2Q9Y2G9 1366 aa11.05□□□□□ -0.64
ARHGEF12-211ENST00000531616 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
ARHGEF12-211ENST00000531616 UBXN4Q92575 508 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 PDE6BP35913 854 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 GPATCH11Q8N954 259 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
ARHGEF12-211ENST00000531616 TMEM88BA6NKF7 163 aa11.03□□□□□ -0.64
ARHGEF12-211ENST00000531616 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.64
ARHGEF12-211ENST00000531616 RASEFQ8IZ41 740 aa11.02□□□□□ -0.64
ARHGEF12-211ENST00000531616 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
ARHGEF12-211ENST00000531616 ABCB7O75027 752 aa11.02□□□□□ -0.65
ARHGEF12-211ENST00000531616 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
ARHGEF12-211ENST00000531616 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
ARHGEF12-211ENST00000531616 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
ARHGEF12-211ENST00000531616 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
ARHGEF12-211ENST00000531616 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
ARHGEF12-211ENST00000531616 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
ARHGEF12-211ENST00000531616 MAP2K5Q13163 448 aa11□□□□□ -0.65
ARHGEF12-211ENST00000531616 SPTY2D1Q68D10 685 aaPredicted RBP11□□□□□ -0.65
ARHGEF12-211ENST00000531616 DPYSL4O14531 572 aa11□□□□□ -0.65
ARHGEF12-211ENST00000531616 TSNAXIP1Q2TAA8 658 aa11□□□□□ -0.65
ARHGEF12-211ENST00000531616 ZC3H6P61129 1189 aaKnown RBP11□□□□□ -0.65
ARHGEF12-211ENST00000531616 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
ARHGEF12-211ENST00000531616 HDGFL1Q5TGJ6 251 aa10.99□□□□□ -0.65
ARHGEF12-211ENST00000531616 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
ARHGEF12-211ENST00000531616 USTQ9Y2C2 406 aa10.99□□□□□ -0.65
ARHGEF12-211ENST00000531616 MINK1Q8N4C8 1332 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF12-211ENST00000531616 PAX3P23760 479 aa10.98□□□□□ -0.65
ARHGEF12-211ENST00000531616 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF12-211ENST00000531616 RECKO95980 971 aa10.98□□□□□ -0.65
ARHGEF12-211ENST00000531616 PTMSP20962 102 aa10.98□□□□□ -0.65
ARHGEF12-211ENST00000531616 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
ARHGEF12-211ENST00000531616 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
ARHGEF12-211ENST00000531616 FOXD4Q12950 439 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF12-211ENST00000531616 SH3D19Q5HYK7 790 aa10.96□□□□□ -0.65
ARHGEF12-211ENST00000531616 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
ARHGEF12-211ENST00000531616 IQSEC3Q9UPP2 1182 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF12-211ENST00000531616 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.66
ARHGEF12-211ENST00000531616 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.66
ARHGEF12-211ENST00000531616 SPDYE6P0CI01 402 aa10.96□□□□□ -0.66
ARHGEF12-211ENST00000531616 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.66
ARHGEF12-211ENST00000531616 FAM212AQ96EL1 285 aa10.96□□□□□ -0.66
ARHGEF12-211ENST00000531616 MAFGO15525 162 aa10.95□□□□□ -0.66
ARHGEF12-211ENST00000531616 PNMA2Q9UL42 364 aa10.95□□□□□ -0.66
ARHGEF12-211ENST00000531616 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
ARHGEF12-211ENST00000531616 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
ARHGEF12-211ENST00000531616 PMM1Q92871 262 aa10.94□□□□□ -0.66
ARHGEF12-211ENST00000531616 G3BP2Q9UN86 482 aaKnown RBP10.94□□□□□ -0.66
ARHGEF12-211ENST00000531616 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
ARHGEF12-211ENST00000531616 SERPINB4P48594 390 aa10.94□□□□□ -0.66
ARHGEF12-211ENST00000531616 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
ARHGEF12-211ENST00000531616 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
ARHGEF12-211ENST00000531616 TERF2IPQ9NYB0 399 aa10.93□□□□□ -0.66
ARHGEF12-211ENST00000531616 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF12-211ENST00000531616 NLGN1Q8N2Q7 840 aa10.92□□□□□ -0.66
ARHGEF12-211ENST00000531616 PIF1Q9H611 641 aa10.92□□□□□ -0.66
ARHGEF12-211ENST00000531616 MSH5O43196 834 aa10.91□□□□□ -0.66
ARHGEF12-211ENST00000531616 RALBP1Q15311 655 aa10.91□□□□□ -0.66
ARHGEF12-211ENST00000531616 LARGE2Q8N3Y3 721 aa10.91□□□□□ -0.66
ARHGEF12-211ENST00000531616 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
ARHGEF12-211ENST00000531616 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
ARHGEF12-211ENST00000531616 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.66
ARHGEF12-211ENST00000531616 RFC5P40937 340 aa10.9□□□□□ -0.66
ARHGEF12-211ENST00000531616 C8orf37Q96NL8 207 aa10.9□□□□□ -0.66
ARHGEF12-211ENST00000531616 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
ARHGEF12-211ENST00000531616 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
ARHGEF12-211ENST00000531616 SETQ01105 290 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 SPACA7Q96KW9 195 aa10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 KCNG1Q9UIX4 513 aa10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 ANKRD33BA6NCL7 494 aa10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
ARHGEF12-211ENST00000531616 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF12-211ENST00000531616 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
ARHGEF12-211ENST00000531616 BEGAINQ9BUH8 593 aa10.88□□□□□ -0.67
ARHGEF12-211ENST00000531616 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 PPP1R12CQ9BZL4 782 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 MDM2Q00987 491 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 PSME1Q06323 249 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 NME8Q8N427 588 aa10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
ARHGEF12-211ENST00000531616 CCDC144BQ3MJ40 725 aa10.86□□□□□ -0.67
ARHGEF12-211ENST00000531616 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
ARHGEF12-211ENST00000531616 hCG_2014768A0A024R1R8 64 aa10.86□□□□□ -0.67
ARHGEF12-211ENST00000531616 GTF2F1P35269 517 aaKnown RBP eCLIP10.86□□□□□ -0.67
ARHGEF12-211ENST00000531616 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
ARHGEF12-211ENST00000531616 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
ARHGEF12-211ENST00000531616 PMFBP1Q8TBY8 1022 aa10.85□□□□□ -0.67
ARHGEF12-211ENST00000531616 CREB3O43889 395 aa10.84□□□□□ -0.67
ARHGEF12-211ENST00000531616 GNPATO15228 680 aa10.84□□□□□ -0.67
ARHGEF12-211ENST00000531616 CSPP1Q1MSJ5 1256 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms