RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
NPIPA3-202ENST00000531598 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
NPIPA3-202ENST00000531598 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
NPIPA3-202ENST00000531598 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
NPIPA3-202ENST00000531598 COL17A1Q9UMD9 1497 aaPredicted RBP13.28□□□□□ -0.28
NPIPA3-202ENST00000531598 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
NPIPA3-202ENST00000531598 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
NPIPA3-202ENST00000531598 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
NPIPA3-202ENST00000531598 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.29
NPIPA3-202ENST00000531598 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
NPIPA3-202ENST00000531598 RALBP1Q15311 655 aa13.25□□□□□ -0.29
NPIPA3-202ENST00000531598 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
NPIPA3-202ENST00000531598 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
NPIPA3-202ENST00000531598 KIF13AQ9H1H9 1805 aa13.24□□□□□ -0.29
NPIPA3-202ENST00000531598 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
NPIPA3-202ENST00000531598 TESK2Q96S53 571 aa13.23□□□□□ -0.29
NPIPA3-202ENST00000531598 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
NPIPA3-202ENST00000531598 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
NPIPA3-202ENST00000531598 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
NPIPA3-202ENST00000531598 UGGT1Q9NYU2 1555 aa13.21□□□□□ -0.29
NPIPA3-202ENST00000531598 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
NPIPA3-202ENST00000531598 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.29
NPIPA3-202ENST00000531598 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
NPIPA3-202ENST00000531598 SYNMO15061 1565 aa13.2□□□□□ -0.3
NPIPA3-202ENST00000531598 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
NPIPA3-202ENST00000531598 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
NPIPA3-202ENST00000531598 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
NPIPA3-202ENST00000531598 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
NPIPA3-202ENST00000531598 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
NPIPA3-202ENST00000531598 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
NPIPA3-202ENST00000531598 SPATA31D1Q6ZQQ2 1576 aa13.18□□□□□ -0.3
NPIPA3-202ENST00000531598 PPLO60437 1756 aa13.17□□□□□ -0.3
NPIPA3-202ENST00000531598 IDI1Q13907 227 aa13.17□□□□□ -0.3
NPIPA3-202ENST00000531598 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
NPIPA3-202ENST00000531598 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
NPIPA3-202ENST00000531598 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
NPIPA3-202ENST00000531598 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
NPIPA3-202ENST00000531598 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
NPIPA3-202ENST00000531598 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
NPIPA3-202ENST00000531598 MYBBP1AQ9BQG0 1328 aaKnown RBP13.15□□□□□ -0.3
NPIPA3-202ENST00000531598 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
NPIPA3-202ENST00000531598 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
NPIPA3-202ENST00000531598 NPC1L1Q9UHC9 1359 aa13.15□□□□□ -0.3
NPIPA3-202ENST00000531598 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
NPIPA3-202ENST00000531598 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
NPIPA3-202ENST00000531598 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
NPIPA3-202ENST00000531598 INSRP06213 1382 aa13.13□□□□□ -0.31
NPIPA3-202ENST00000531598 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
NPIPA3-202ENST00000531598 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
NPIPA3-202ENST00000531598 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
NPIPA3-202ENST00000531598 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
NPIPA3-202ENST00000531598 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
NPIPA3-202ENST00000531598 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
NPIPA3-202ENST00000531598 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
NPIPA3-202ENST00000531598 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
NPIPA3-202ENST00000531598 KNSTRNQ9Y448 316 aa13.11□□□□□ -0.31
NPIPA3-202ENST00000531598 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
NPIPA3-202ENST00000531598 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
NPIPA3-202ENST00000531598 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
NPIPA3-202ENST00000531598 PANK3Q9H999 370 aa13.09□□□□□ -0.31
NPIPA3-202ENST00000531598 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
NPIPA3-202ENST00000531598 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
NPIPA3-202ENST00000531598 TNRQ92752 1358 aa13.07□□□□□ -0.32
NPIPA3-202ENST00000531598 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
NPIPA3-202ENST00000531598 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
NPIPA3-202ENST00000531598 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
NPIPA3-202ENST00000531598 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
NPIPA3-202ENST00000531598 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
NPIPA3-202ENST00000531598 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
NPIPA3-202ENST00000531598 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
NPIPA3-202ENST00000531598 MLECQ14165 292 aa13.04□□□□□ -0.32
NPIPA3-202ENST00000531598 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
NPIPA3-202ENST00000531598 NEFLP07196 543 aa13.03□□□□□ -0.32
NPIPA3-202ENST00000531598 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
NPIPA3-202ENST00000531598 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
NPIPA3-202ENST00000531598 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
NPIPA3-202ENST00000531598 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
NPIPA3-202ENST00000531598 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
NPIPA3-202ENST00000531598 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
NPIPA3-202ENST00000531598 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
NPIPA3-202ENST00000531598 ATAD2Q6PL18 1390 aa13.02□□□□□ -0.33
NPIPA3-202ENST00000531598 YTHDC2Q9H6S0 1430 aaKnown RBP13.02□□□□□ -0.33
NPIPA3-202ENST00000531598 NSD2O96028 1365 aa13.01□□□□□ -0.33
NPIPA3-202ENST00000531598 QRICH2Q9H0J4 1663 aa13□□□□□ -0.33
NPIPA3-202ENST00000531598 ALKQ9UM73 1620 aa13□□□□□ -0.33
NPIPA3-202ENST00000531598 ABCC11Q96J66 1382 aa13□□□□□ -0.33
NPIPA3-202ENST00000531598 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
NPIPA3-202ENST00000531598 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
NPIPA3-202ENST00000531598 CFAP65Q6ZU64 1925 aaKnown RBP12.99□□□□□ -0.33
NPIPA3-202ENST00000531598 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
NPIPA3-202ENST00000531598 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
NPIPA3-202ENST00000531598 POGKQ9P215 609 aa12.98□□□□□ -0.33
NPIPA3-202ENST00000531598 ARHGEF28Q8N1W1 1705 aaKnown RBP12.98□□□□□ -0.33
NPIPA3-202ENST00000531598 CGNL1Q0VF96 1302 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 MYOM1P52179 1685 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 CCDC184Q52MB2 194 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 PTPRMP28827 1452 aa12.97□□□□□ -0.33
NPIPA3-202ENST00000531598 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms