RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ANKRD13DQ6ZTN6 518 aa7.31□□□□□ -1.24
ECHDC1-221ENST00000531582 DDRGK1Q96HY6 314 aa7.31□□□□□ -1.24
ECHDC1-221ENST00000531582 MDM2Q00987 491 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-221ENST00000531582 PARP9Q8IXQ6 854 aa7.3□□□□□ -1.24
ECHDC1-221ENST00000531582 TMUB1Q9BVT8 246 aa7.3□□□□□ -1.24
ECHDC1-221ENST00000531582 KDM4CQ9H3R0 1056 aa7.3□□□□□ -1.24
ECHDC1-221ENST00000531582 TMEM134Q9H6X4 195 aa7.3□□□□□ -1.24
ECHDC1-221ENST00000531582 GOLGA8CPA6NN73 597 aa7.29□□□□□ -1.24
ECHDC1-221ENST00000531582 HRO43593 1189 aa7.29□□□□□ -1.24
ECHDC1-221ENST00000531582 GIGYF2Q6Y7W6 1299 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-221ENST00000531582 CDAN1Q8IWY9 1227 aa7.29□□□□□ -1.24
ECHDC1-221ENST00000531582 PHOX2BQ99453 314 aa7.29□□□□□ -1.24
ECHDC1-221ENST00000531582 TMEM132AQ24JP5 1023 aa7.28□□□□□ -1.24
ECHDC1-221ENST00000531582 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
ECHDC1-221ENST00000531582 SMAPO00193 183 aa7.27□□□□□ -1.25
ECHDC1-221ENST00000531582 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-221ENST00000531582 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
ECHDC1-221ENST00000531582 FAM217BQ9NTX9 383 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-221ENST00000531582 SEPT9Q9UHD8 586 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-221ENST00000531582 ZFRQ96KR1 1074 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-221ENST00000531582 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
ECHDC1-221ENST00000531582 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
ECHDC1-221ENST00000531582 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-221ENST00000531582 C3orf80F5H4A9 247 aa7.25□□□□□ -1.25
ECHDC1-221ENST00000531582 ANKK1Q8NFD2 765 aa7.25□□□□□ -1.25
ECHDC1-221ENST00000531582 ANP32EQ9BTT0 268 aa7.25□□□□□ -1.25
ECHDC1-221ENST00000531582 SWT1Q5T5J6 900 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-221ENST00000531582 LRCH3Q96II8 777 aa7.24□□□□□ -1.25
ECHDC1-221ENST00000531582 RSPH6AQ9H0K4 717 aa7.24□□□□□ -1.25
ECHDC1-221ENST00000531582 REPIN1Q9BWE0 567 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-221ENST00000531582 PRR14Q9BWN1 585 aa7.23□□□□□ -1.25
ECHDC1-221ENST00000531582 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-221ENST00000531582 DDX11L8A8MPP1 907 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 CD46P15529 392 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 SAMD7Q7Z3H4 446 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 HOMEZQ8IX15 550 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 GOPCQ9HD26 462 aa7.22□□□□□ -1.25
ECHDC1-221ENST00000531582 SOWAHBA6NEL2 793 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 MS4A1P11836 297 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 NLRP7Q8WX94 980 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 WNT2BQ93097 391 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.26
ECHDC1-221ENST00000531582 USP46P62068 366 aa7.2□□□□□ -1.26
ECHDC1-221ENST00000531582 KMT5BQ4FZB7 885 aa7.2□□□□□ -1.26
ECHDC1-221ENST00000531582 GRIPAP1Q4V328 841 aa7.2□□□□□ -1.26
ECHDC1-221ENST00000531582 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
ECHDC1-221ENST00000531582 FAM117AQ9C073 453 aa7.2□□□□□ -1.26
ECHDC1-221ENST00000531582 PPP4CP60510 307 aa7.19□□□□□ -1.26
ECHDC1-221ENST00000531582 NYAP1Q6ZVC0 841 aa7.19□□□□□ -1.26
ECHDC1-221ENST00000531582 NUTM1Q86Y26 1132 aa7.19□□□□□ -1.26
ECHDC1-221ENST00000531582 GCGRP47871 477 aa7.18□□□□□ -1.26
ECHDC1-221ENST00000531582 TSR3Q9UJK0 312 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-221ENST00000531582 RNF40O75150 1001 aa7.17□□□□□ -1.26
ECHDC1-221ENST00000531582 GJA5P36382 358 aa7.17□□□□□ -1.26
ECHDC1-221ENST00000531582 KDM4AO75164 1064 aa7.16□□□□□ -1.26
ECHDC1-221ENST00000531582 SH3D19Q5HYK7 790 aa7.16□□□□□ -1.26
ECHDC1-221ENST00000531582 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 SLC10A3P09131 477 aa7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 SKIV2LQ15477 1246 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 ACIN1Q9UKV3 1341 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-221ENST00000531582 CFHP08603 1231 aa7.14□□□□□ -1.27
ECHDC1-221ENST00000531582 THSD4Q6ZMP0 1018 aa7.14□□□□□ -1.27
ECHDC1-221ENST00000531582 TBC1D2Q9BYX2 928 aa7.14□□□□□ -1.27
ECHDC1-221ENST00000531582 ACTN4O43707 911 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-221ENST00000531582 TUSC1Q2TAM9 212 aa7.13□□□□□ -1.27
ECHDC1-221ENST00000531582 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
ECHDC1-221ENST00000531582 KCTD12Q96CX2 325 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-221ENST00000531582 NEFLP07196 543 aa7.12□□□□□ -1.27
ECHDC1-221ENST00000531582 ZEB1P37275 1124 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-221ENST00000531582 ATP6V1AP38606 617 aa7.12□□□□□ -1.27
ECHDC1-221ENST00000531582 BCAMP50895 628 aa7.12□□□□□ -1.27
ECHDC1-221ENST00000531582 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
ECHDC1-221ENST00000531582 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
ECHDC1-221ENST00000531582 TIMELESSQ9UNS1 1208 aa7.11□□□□□ -1.27
ECHDC1-221ENST00000531582 SPTLC1O15269 473 aa7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 CLK2P49760 499 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 RIC3Q7Z5B4 369 aa7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 PKNOX2Q96KN3 472 aa7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 ATP1B4Q9UN42 357 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 NISCHQ9Y2I1 1504 aa7.1□□□□□ -1.27
ECHDC1-221ENST00000531582 HOXA2O43364 376 aa7.09□□□□□ -1.27
ECHDC1-221ENST00000531582 SPNS2Q8IVW8 549 aa7.09□□□□□ -1.27
ECHDC1-221ENST00000531582 HCSTQ9UBK5 93 aa7.09□□□□□ -1.27
ECHDC1-221ENST00000531582 NR1I2O75469 434 aa7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 FUT2Q10981 343 aa7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 Q3C1V9 767 aa7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 PRPF38BQ5VTL8 546 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 RSBN1LQ6PCB5 846 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 RNF166Q96A37 237 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 WBP1LQ9NX94 342 aa7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 PCDHB3Q9Y5E6 796 aa7.08□□□□□ -1.28
ECHDC1-221ENST00000531582 MOXD2PA6NHM9 499 aa7.07□□□□□ -1.28
ECHDC1-221ENST00000531582 SPDYE5A6NIY4 337 aa7.07□□□□□ -1.28
ECHDC1-221ENST00000531582 FDX1P10109 184 aa7.07□□□□□ -1.28
ECHDC1-221ENST00000531582 POLR3EQ9NVU0 708 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms