RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.74
ATM-216ENST00000531525 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
ATM-216ENST00000531525 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
ATM-216ENST00000531525 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
ATM-216ENST00000531525 FECHP22830 423 aa10.38□□□□□ -0.75
ATM-216ENST00000531525 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
ATM-216ENST00000531525 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
ATM-216ENST00000531525 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
ATM-216ENST00000531525 GNPATO15228 680 aa10.38□□□□□ -0.75
ATM-216ENST00000531525 PLSCR2Q9NRY7 297 aa10.38□□□□□ -0.75
ATM-216ENST00000531525 TATDN2Q93075 761 aa10.37□□□□□ -0.75
ATM-216ENST00000531525 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
ATM-216ENST00000531525 NESP48681 1621 aa10.36□□□□□ -0.75
ATM-216ENST00000531525 SMAPO00193 183 aa10.36□□□□□ -0.75
ATM-216ENST00000531525 APBB1O00213 710 aa10.36□□□□□ -0.75
ATM-216ENST00000531525 LAPTM4BQ86VI4 370 aa10.36□□□□□ -0.75
ATM-216ENST00000531525 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
ATM-216ENST00000531525 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
ATM-216ENST00000531525 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
ATM-216ENST00000531525 RNF166Q96A37 237 aaPredicted RBP10.35□□□□□ -0.75
ATM-216ENST00000531525 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
ATM-216ENST00000531525 FAM98CQ17RN3 349 aaKnown RBP10.33□□□□□ -0.76
ATM-216ENST00000531525 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
ATM-216ENST00000531525 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
ATM-216ENST00000531525 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
ATM-216ENST00000531525 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
ATM-216ENST00000531525 EYA1Q99502 592 aa10.33□□□□□ -0.76
ATM-216ENST00000531525 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
ATM-216ENST00000531525 ZMYND10O75800 440 aa10.31□□□□□ -0.76
ATM-216ENST00000531525 KCTD12Q96CX2 325 aaKnown RBP10.31□□□□□ -0.76
ATM-216ENST00000531525 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
ATM-216ENST00000531525 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
ATM-216ENST00000531525 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
ATM-216ENST00000531525 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
ATM-216ENST00000531525 WNT2BQ93097 391 aa10.29□□□□□ -0.76
ATM-216ENST00000531525 BAZ1AQ9NRL2 1556 aaPredicted RBP10.28□□□□□ -0.76
ATM-216ENST00000531525 LOC105371045A0A1W2PR82 267 aa10.28□□□□□ -0.76
ATM-216ENST00000531525 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
ATM-216ENST00000531525 THSD4Q6ZMP0 1018 aa10.27□□□□□ -0.77
ATM-216ENST00000531525 RBM46Q8TBY0 533 aaKnown RBP10.27□□□□□ -0.77
ATM-216ENST00000531525 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
ATM-216ENST00000531525 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
ATM-216ENST00000531525 METTL3Q86U44 580 aaKnown RBP10.26□□□□□ -0.77
ATM-216ENST00000531525 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
ATM-216ENST00000531525 SOWAHBA6NEL2 793 aa10.25□□□□□ -0.77
ATM-216ENST00000531525 OATP04181 439 aa10.25□□□□□ -0.77
ATM-216ENST00000531525 IRF6O14896 467 aa10.24□□□□□ -0.77
ATM-216ENST00000531525 BCAMP50895 628 aa10.24□□□□□ -0.77
ATM-216ENST00000531525 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
ATM-216ENST00000531525 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
ATM-216ENST00000531525 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
ATM-216ENST00000531525 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
ATM-216ENST00000531525 DNAJB2P25686 324 aa10.22□□□□□ -0.77
ATM-216ENST00000531525 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
ATM-216ENST00000531525 AK7Q96M32 723 aa10.22□□□□□ -0.77
ATM-216ENST00000531525 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
ATM-216ENST00000531525 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.22□□□□□ -0.77
ATM-216ENST00000531525 SWT1Q5T5J6 900 aaKnown RBP10.21□□□□□ -0.78
ATM-216ENST00000531525 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.78
ATM-216ENST00000531525 CCDC102AQ96A19 550 aa10.21□□□□□ -0.78
ATM-216ENST00000531525 TMEM134Q9H6X4 195 aa10.21□□□□□ -0.78
ATM-216ENST00000531525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.2□□□□□ -0.78
ATM-216ENST00000531525 PTPN5P54829 565 aa10.2□□□□□ -0.78
ATM-216ENST00000531525 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
ATM-216ENST00000531525 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
ATM-216ENST00000531525 HCSTQ9UBK5 93 aa10.19□□□□□ -0.78
ATM-216ENST00000531525 NLRP7Q8WX94 980 aa10.18□□□□□ -0.78
ATM-216ENST00000531525 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
ATM-216ENST00000531525 WDR62O43379 1518 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 RAD21O60216 631 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 CCDC82Q8N4S0 544 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 HPS5Q9UPZ3 1129 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 MROH2BQ7Z745 1585 aa10.17□□□□□ -0.78
ATM-216ENST00000531525 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
ATM-216ENST00000531525 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
ATM-216ENST00000531525 RNF40O75150 1001 aa10.13□□□□□ -0.79
ATM-216ENST00000531525 SLF2Q8IX21 1173 aa10.13□□□□□ -0.79
ATM-216ENST00000531525 PPP4CP60510 307 aa10.12□□□□□ -0.79
ATM-216ENST00000531525 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
ATM-216ENST00000531525 CADPSQ9ULU8 1353 aa10.1□□□□□ -0.79
ATM-216ENST00000531525 IGSF3O75054 1194 aa10.1□□□□□ -0.79
ATM-216ENST00000531525 SLC10A3P09131 477 aa10.1□□□□□ -0.79
ATM-216ENST00000531525 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
ATM-216ENST00000531525 FLIIQ13045 1269 aa10.09□□□□□ -0.79
ATM-216ENST00000531525 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
ATM-216ENST00000531525 TRIM66O15016 1216 aa10.08□□□□□ -0.8
ATM-216ENST00000531525 SLC4A3P48751 1232 aa10.08□□□□□ -0.8
ATM-216ENST00000531525 PDE4DQ08499 809 aa10.08□□□□□ -0.8
ATM-216ENST00000531525 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
ATM-216ENST00000531525 AMHR2Q16671 573 aa10.07□□□□□ -0.8
ATM-216ENST00000531525 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
ATM-216ENST00000531525 CEP164Q9UPV0 1460 aa10.07□□□□□ -0.8
ATM-216ENST00000531525 APLP1P51693 650 aa10.07□□□□□ -0.8
ATM-216ENST00000531525 MYT1Q01538 1121 aa10.07□□□□□ -0.8
ATM-216ENST00000531525 WIZO95785 1651 aa10.06□□□□□ -0.8
ATM-216ENST00000531525 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
ATM-216ENST00000531525 GPCPD1Q9NPB8 672 aa10.06□□□□□ -0.8
ATM-216ENST00000531525 MTMR7Q9Y216 660 aa10.06□□□□□ -0.8
ATM-216ENST00000531525 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms