RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 SLC52A1Q9NWF4 448 aa23.44■■□□□ 1.34
SC5D-207ENST00000531140 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
SC5D-207ENST00000531140 E9PCH4 1651 aa23.39■■□□□ 1.34
SC5D-207ENST00000531140 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
SC5D-207ENST00000531140 SYNMO15061 1565 aa23.36■■□□□ 1.33
SC5D-207ENST00000531140 NOS1P29475 1434 aa23.35■■□□□ 1.33
SC5D-207ENST00000531140 PIK3C2BO00750 1634 aa23.35■■□□□ 1.33
SC5D-207ENST00000531140 KCNA6P17658 529 aa23.35■■□□□ 1.33
SC5D-207ENST00000531140 BCANQ96GW7 911 aa23.34■■□□□ 1.33
SC5D-207ENST00000531140 KDM5AP29375 1690 aaKnown RBP23.34■■□□□ 1.33
SC5D-207ENST00000531140 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.33
SC5D-207ENST00000531140 STRCP1A6NGW2 1772 aa23.33■■□□□ 1.33
SC5D-207ENST00000531140 TRIM52Q96A61 297 aa23.33■■□□□ 1.33
SC5D-207ENST00000531140 SLC26A8Q96RN1 970 aa23.32■■□□□ 1.32
SC5D-207ENST00000531140 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
SC5D-207ENST00000531140 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
SC5D-207ENST00000531140 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
SC5D-207ENST00000531140 MPHOSPH9Q99550 1183 aa23.29■■□□□ 1.32
SC5D-207ENST00000531140 TRPM2O94759 1503 aa23.28■■□□□ 1.32
SC5D-207ENST00000531140 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
SC5D-207ENST00000531140 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
SC5D-207ENST00000531140 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
SC5D-207ENST00000531140 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
SC5D-207ENST00000531140 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
SC5D-207ENST00000531140 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
SC5D-207ENST00000531140 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
SC5D-207ENST00000531140 FAM135BQ49AJ0 1406 aa23.23■■□□□ 1.31
SC5D-207ENST00000531140 PLEKHG1Q9ULL1 1385 aa23.2■■□□□ 1.3
SC5D-207ENST00000531140 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
SC5D-207ENST00000531140 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
SC5D-207ENST00000531140 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
SC5D-207ENST00000531140 MSH6P52701 1360 aa23.16■■□□□ 1.3
SC5D-207ENST00000531140 RBM33Q96EV2 1170 aaKnown RBP23.16■■□□□ 1.3
SC5D-207ENST00000531140 KIF1BO60333 1816 aa23.16■■□□□ 1.3
SC5D-207ENST00000531140 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
SC5D-207ENST00000531140 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
SC5D-207ENST00000531140 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.3
SC5D-207ENST00000531140 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
SC5D-207ENST00000531140 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.29
SC5D-207ENST00000531140 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
SC5D-207ENST00000531140 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
SC5D-207ENST00000531140 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
SC5D-207ENST00000531140 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
SC5D-207ENST00000531140 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
SC5D-207ENST00000531140 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
SC5D-207ENST00000531140 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
SC5D-207ENST00000531140 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
SC5D-207ENST00000531140 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
SC5D-207ENST00000531140 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
SC5D-207ENST00000531140 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
SC5D-207ENST00000531140 ATF3P18847 181 aa23.02■■□□□ 1.28
SC5D-207ENST00000531140 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
SC5D-207ENST00000531140 MYO5BQ9ULV0 1848 aa23.02■■□□□ 1.28
SC5D-207ENST00000531140 CHD2O14647 1828 aaKnown RBP23.01■■□□□ 1.27
SC5D-207ENST00000531140 SPATA31E1Q6ZUB1 1445 aa23.01■■□□□ 1.27
SC5D-207ENST00000531140 ROBO1Q9Y6N7 1651 aa23.01■■□□□ 1.27
SC5D-207ENST00000531140 ZNF326Q5BKZ1 582 aaKnown RBP23.01■■□□□ 1.27
SC5D-207ENST00000531140 STAC3Q96MF2 364 aa23.01■■□□□ 1.27
SC5D-207ENST00000531140 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
SC5D-207ENST00000531140 ADAMTS13Q76LX8 1427 aa23■■□□□ 1.27
SC5D-207ENST00000531140 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
SC5D-207ENST00000531140 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
SC5D-207ENST00000531140 JCADQ9P266 1359 aa22.97■■□□□ 1.27
SC5D-207ENST00000531140 IFT172Q9UG01 1749 aa22.96■■□□□ 1.27
SC5D-207ENST00000531140 PPLO60437 1756 aa22.95■■□□□ 1.26
SC5D-207ENST00000531140 MSH5O43196 834 aa22.94■■□□□ 1.26
SC5D-207ENST00000531140 NEXMIFQ5QGS0 1516 aa22.92■■□□□ 1.26
SC5D-207ENST00000531140 POTEAQ6S8J7 498 aa22.91■■□□□ 1.26
SC5D-207ENST00000531140 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
SC5D-207ENST00000531140 MYOM2P54296 1465 aa22.9■■□□□ 1.26
SC5D-207ENST00000531140 SPATA31A6Q5VVP1 1343 aa22.89■■□□□ 1.26
SC5D-207ENST00000531140 PHLPP1O60346 1717 aa22.88■■□□□ 1.25
SC5D-207ENST00000531140 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
SC5D-207ENST00000531140 VGFO15240 615 aaPredicted RBP22.86■■□□□ 1.25
SC5D-207ENST00000531140 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
SC5D-207ENST00000531140 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
SC5D-207ENST00000531140 DCCP43146 1447 aa22.84■■□□□ 1.25
SC5D-207ENST00000531140 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
SC5D-207ENST00000531140 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.84■■□□□ 1.25
SC5D-207ENST00000531140 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
SC5D-207ENST00000531140 METP08581 1390 aa22.83■■□□□ 1.25
SC5D-207ENST00000531140 LAMC1P11047 1609 aa22.82■■□□□ 1.24
SC5D-207ENST00000531140 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
SC5D-207ENST00000531140 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
SC5D-207ENST00000531140 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
SC5D-207ENST00000531140 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
SC5D-207ENST00000531140 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
SC5D-207ENST00000531140 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
SC5D-207ENST00000531140 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
SC5D-207ENST00000531140 PIK3C2GO75747 1445 aa22.76■■□□□ 1.23
SC5D-207ENST00000531140 NRXN3Q9Y4C0 1643 aa22.75■■□□□ 1.23
SC5D-207ENST00000531140 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
SC5D-207ENST00000531140 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
SC5D-207ENST00000531140 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
SC5D-207ENST00000531140 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
SC5D-207ENST00000531140 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
SC5D-207ENST00000531140 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
SC5D-207ENST00000531140 MST1RQ04912 1400 aa22.73■■□□□ 1.23
SC5D-207ENST00000531140 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
SC5D-207ENST00000531140 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms