RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
CHEK1-211ENST00000531062 WNT2BQ93097 391 aa11.92□□□□□ -0.5
CHEK1-211ENST00000531062 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-211ENST00000531062 CLCN1P35523 988 aa11.9□□□□□ -0.5
CHEK1-211ENST00000531062 PDE4DQ08499 809 aa11.9□□□□□ -0.5
CHEK1-211ENST00000531062 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
CHEK1-211ENST00000531062 THSD4Q6ZMP0 1018 aa11.89□□□□□ -0.51
CHEK1-211ENST00000531062 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
CHEK1-211ENST00000531062 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
CHEK1-211ENST00000531062 REPIN1Q9BWE0 567 aaKnown RBP11.89□□□□□ -0.51
CHEK1-211ENST00000531062 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
CHEK1-211ENST00000531062 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
CHEK1-211ENST00000531062 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
CHEK1-211ENST00000531062 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
CHEK1-211ENST00000531062 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
CHEK1-211ENST00000531062 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
CHEK1-211ENST00000531062 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
CHEK1-211ENST00000531062 BCAMP50895 628 aa11.86□□□□□ -0.51
CHEK1-211ENST00000531062 SLC10A3P09131 477 aa11.84□□□□□ -0.51
CHEK1-211ENST00000531062 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-211ENST00000531062 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
CHEK1-211ENST00000531062 RNF40O75150 1001 aa11.83□□□□□ -0.52
CHEK1-211ENST00000531062 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
CHEK1-211ENST00000531062 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
CHEK1-211ENST00000531062 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
CHEK1-211ENST00000531062 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
CHEK1-211ENST00000531062 CD46P15529 392 aa11.8□□□□□ -0.52
CHEK1-211ENST00000531062 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
CHEK1-211ENST00000531062 PPP4CP60510 307 aa11.79□□□□□ -0.52
CHEK1-211ENST00000531062 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
CHEK1-211ENST00000531062 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
CHEK1-211ENST00000531062 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
CHEK1-211ENST00000531062 BRPF1P55201 1214 aaPredicted RBP11.78□□□□□ -0.52
CHEK1-211ENST00000531062 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
CHEK1-211ENST00000531062 GPBP1L1Q9HC44 474 aaPredicted RBP11.78□□□□□ -0.52
CHEK1-211ENST00000531062 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
CHEK1-211ENST00000531062 MS4A1P11836 297 aa11.76□□□□□ -0.53
CHEK1-211ENST00000531062 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
CHEK1-211ENST00000531062 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
CHEK1-211ENST00000531062 GCGRP47871 477 aa11.75□□□□□ -0.53
CHEK1-211ENST00000531062 PTPN5P54829 565 aa11.75□□□□□ -0.53
CHEK1-211ENST00000531062 APLP1P51693 650 aa11.73□□□□□ -0.53
CHEK1-211ENST00000531062 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
CHEK1-211ENST00000531062 CFHP08603 1231 aa11.71□□□□□ -0.53
CHEK1-211ENST00000531062 PRR14Q9BWN1 585 aa11.71□□□□□ -0.53
CHEK1-211ENST00000531062 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
CHEK1-211ENST00000531062 BEGAINQ9BUH8 593 aa11.69□□□□□ -0.54
CHEK1-211ENST00000531062 KDM4AO75164 1064 aa11.66□□□□□ -0.54
CHEK1-211ENST00000531062 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
CHEK1-211ENST00000531062 FAM117AQ9C073 453 aa11.66□□□□□ -0.54
CHEK1-211ENST00000531062 USP46P62068 366 aa11.65□□□□□ -0.54
CHEK1-211ENST00000531062 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
CHEK1-211ENST00000531062 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
CHEK1-211ENST00000531062 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
CHEK1-211ENST00000531062 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
CHEK1-211ENST00000531062 ATP6V1AP38606 617 aa11.63□□□□□ -0.55
CHEK1-211ENST00000531062 FUT2Q10981 343 aa11.63□□□□□ -0.55
CHEK1-211ENST00000531062 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
CHEK1-211ENST00000531062 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
CHEK1-211ENST00000531062 TJAP1Q5JTD0 557 aa11.61□□□□□ -0.55
CHEK1-211ENST00000531062 MORN1Q5T089 497 aa11.61□□□□□ -0.55
CHEK1-211ENST00000531062 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
CHEK1-211ENST00000531062 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
CHEK1-211ENST00000531062 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
CHEK1-211ENST00000531062 HOXA2O43364 376 aa11.59□□□□□ -0.55
CHEK1-211ENST00000531062 GJA5P36382 358 aa11.59□□□□□ -0.55
CHEK1-211ENST00000531062 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
CHEK1-211ENST00000531062 MTRQ99707 1265 aa11.58□□□□□ -0.56
CHEK1-211ENST00000531062 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
CHEK1-211ENST00000531062 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
CHEK1-211ENST00000531062 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
CHEK1-211ENST00000531062 MYSM1Q5VVJ2 828 aa11.56□□□□□ -0.56
CHEK1-211ENST00000531062 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
CHEK1-211ENST00000531062 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
CHEK1-211ENST00000531062 SPTLC1O15269 473 aa11.55□□□□□ -0.56
CHEK1-211ENST00000531062 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
CHEK1-211ENST00000531062 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
CHEK1-211ENST00000531062 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
CHEK1-211ENST00000531062 NR1I2O75469 434 aa11.54□□□□□ -0.56
CHEK1-211ENST00000531062 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
CHEK1-211ENST00000531062 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
CHEK1-211ENST00000531062 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
CHEK1-211ENST00000531062 ZPR1O75312 459 aa11.53□□□□□ -0.56
CHEK1-211ENST00000531062 COPS2P61201 443 aa11.53□□□□□ -0.56
CHEK1-211ENST00000531062 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
CHEK1-211ENST00000531062 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
CHEK1-211ENST00000531062 HLA-CQ95604 372 aa11.53□□□□□ -0.56
CHEK1-211ENST00000531062 NDUFV2P19404 249 aa11.52□□□□□ -0.57
CHEK1-211ENST00000531062 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
CHEK1-211ENST00000531062 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
CHEK1-211ENST00000531062 FDX1P10109 184 aa11.51□□□□□ -0.57
CHEK1-211ENST00000531062 KCNC4Q03721 635 aa11.51□□□□□ -0.57
CHEK1-211ENST00000531062 SKIV2LQ15477 1246 aaKnown RBP11.51□□□□□ -0.57
CHEK1-211ENST00000531062 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
CHEK1-211ENST00000531062 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
CHEK1-211ENST00000531062 RIC3Q7Z5B4 369 aa11.5□□□□□ -0.57
CHEK1-211ENST00000531062 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
CHEK1-211ENST00000531062 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
CHEK1-211ENST00000531062 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
CHEK1-211ENST00000531062 Q3C1V9 767 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms