RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 ADGRF5Q8IZF2 1346 aa23.4■■□□□ 1.34
PACS1-209ENST00000529757 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
PACS1-209ENST00000529757 NBPF1Q3BBV0 1214 aa23.39■■□□□ 1.34
PACS1-209ENST00000529757 C3P01024 1663 aa23.39■■□□□ 1.33
PACS1-209ENST00000529757 KIAA1210Q9ULL0 1709 aa23.38■■□□□ 1.33
PACS1-209ENST00000529757 MYO5BQ9ULV0 1848 aa23.38■■□□□ 1.33
PACS1-209ENST00000529757 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
PACS1-209ENST00000529757 VGFO15240 615 aaPredicted RBP23.35■■□□□ 1.33
PACS1-209ENST00000529757 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
PACS1-209ENST00000529757 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
PACS1-209ENST00000529757 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
PACS1-209ENST00000529757 ZFYVE9O95405 1425 aa23.33■■□□□ 1.33
PACS1-209ENST00000529757 ADAMTSL3P82987 1691 aa23.33■■□□□ 1.32
PACS1-209ENST00000529757 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
PACS1-209ENST00000529757 RIMS1Q86UR5 1692 aaKnown RBP23.31■■□□□ 1.32
PACS1-209ENST00000529757 CFAP70Q5T0N1 1121 aa23.3■■□□□ 1.32
PACS1-209ENST00000529757 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
PACS1-209ENST00000529757 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
PACS1-209ENST00000529757 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
PACS1-209ENST00000529757 IQGAP1P46940 1657 aa23.26■■□□□ 1.31
PACS1-209ENST00000529757 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
PACS1-209ENST00000529757 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
PACS1-209ENST00000529757 C14orf93Q9H972 538 aaKnown RBP23.26■■□□□ 1.31
PACS1-209ENST00000529757 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
PACS1-209ENST00000529757 SCAF11Q99590 1463 aaKnown RBP23.26■■□□□ 1.31
PACS1-209ENST00000529757 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
PACS1-209ENST00000529757 UBR1Q8IWV7 1749 aa23.25■■□□□ 1.31
PACS1-209ENST00000529757 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
PACS1-209ENST00000529757 POLR1AO95602 1720 aaPredicted RBP23.24■■□□□ 1.31
PACS1-209ENST00000529757 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
PACS1-209ENST00000529757 C11orf95C9JLR9 678 aaPredicted RBP23.22■■□□□ 1.31
PACS1-209ENST00000529757 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.21■■□□□ 1.31
PACS1-209ENST00000529757 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
PACS1-209ENST00000529757 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
PACS1-209ENST00000529757 KIF7Q2M1P5 1343 aa23.2■■□□□ 1.3
PACS1-209ENST00000529757 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
PACS1-209ENST00000529757 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
PACS1-209ENST00000529757 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
PACS1-209ENST00000529757 TESK2Q96S53 571 aa23.15■■□□□ 1.3
PACS1-209ENST00000529757 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
PACS1-209ENST00000529757 ALKQ9UM73 1620 aa23.13■■□□□ 1.29
PACS1-209ENST00000529757 CEP170BQ9Y4F5 1589 aaPredicted RBP23.12■■□□□ 1.29
PACS1-209ENST00000529757 SLIT1O75093 1534 aa23.11■■□□□ 1.29
PACS1-209ENST00000529757 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
PACS1-209ENST00000529757 THEMISQ8N1K5 641 aaPredicted RBP23.11■■□□□ 1.29
PACS1-209ENST00000529757 PTPRMP28827 1452 aa23.11■■□□□ 1.29
PACS1-209ENST00000529757 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
PACS1-209ENST00000529757 ARHGAP23Q9P227 1491 aa23.1■■□□□ 1.29
PACS1-209ENST00000529757 TMF1P82094 1093 aa23.09■■□□□ 1.29
PACS1-209ENST00000529757 MIER1Q8N108 512 aa23.09■■□□□ 1.29
PACS1-209ENST00000529757 POLR3GLQ9BT43 218 aa23.09■■□□□ 1.29
PACS1-209ENST00000529757 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
PACS1-209ENST00000529757 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.28
PACS1-209ENST00000529757 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
PACS1-209ENST00000529757 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
PACS1-209ENST00000529757 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
PACS1-209ENST00000529757 CENPJQ9HC77 1338 aaPredicted RBP23.06■■□□□ 1.28
PACS1-209ENST00000529757 SLC24A1O60721 1099 aa23.06■■□□□ 1.28
PACS1-209ENST00000529757 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
PACS1-209ENST00000529757 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
PACS1-209ENST00000529757 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
PACS1-209ENST00000529757 LTKP29376 864 aa23.05■■□□□ 1.28
PACS1-209ENST00000529757 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
PACS1-209ENST00000529757 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
PACS1-209ENST00000529757 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
PACS1-209ENST00000529757 ARHGEF28Q8N1W1 1705 aaKnown RBP23.03■■□□□ 1.28
PACS1-209ENST00000529757 BCANQ96GW7 911 aa23.02■■□□□ 1.28
PACS1-209ENST00000529757 CDCA8Q53HL2 280 aa23.01■■□□□ 1.27
PACS1-209ENST00000529757 STK26Q9P289 416 aa23■■□□□ 1.27
PACS1-209ENST00000529757 QRICH2Q9H0J4 1663 aa23■■□□□ 1.27
PACS1-209ENST00000529757 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
PACS1-209ENST00000529757 ADAMTS13Q76LX8 1427 aa22.98■■□□□ 1.27
PACS1-209ENST00000529757 ANP32CO43423 234 aa22.97■■□□□ 1.27
PACS1-209ENST00000529757 DLC1Q96QB1 1528 aa22.96■■□□□ 1.27
PACS1-209ENST00000529757 METP08581 1390 aa22.96■■□□□ 1.27
PACS1-209ENST00000529757 ABCC11Q96J66 1382 aa22.95■■□□□ 1.26
PACS1-209ENST00000529757 MED14O60244 1454 aa22.94■■□□□ 1.26
PACS1-209ENST00000529757 DIP2AQ14689 1571 aa22.92■■□□□ 1.26
PACS1-209ENST00000529757 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
PACS1-209ENST00000529757 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
PACS1-209ENST00000529757 POGKQ9P215 609 aa22.91■■□□□ 1.26
PACS1-209ENST00000529757 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
PACS1-209ENST00000529757 TECPR2O15040 1411 aa22.9■■□□□ 1.26
PACS1-209ENST00000529757 TBX22Q9Y458 520 aa22.9■■□□□ 1.26
PACS1-209ENST00000529757 SLC26A8Q96RN1 970 aa22.89■■□□□ 1.25
PACS1-209ENST00000529757 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
PACS1-209ENST00000529757 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.25
PACS1-209ENST00000529757 EVC2Q86UK5 1308 aa22.88■■□□□ 1.25
PACS1-209ENST00000529757 CPS1P31327 1500 aa22.87■■□□□ 1.25
PACS1-209ENST00000529757 SIRT1Q96EB6 747 aa22.87■■□□□ 1.25
PACS1-209ENST00000529757 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
PACS1-209ENST00000529757 FAM135BQ49AJ0 1406 aa22.86■■□□□ 1.25
PACS1-209ENST00000529757 MYOM1P52179 1685 aa22.85■■□□□ 1.25
PACS1-209ENST00000529757 PUS7Q96PZ0 661 aaKnown RBP22.84■■□□□ 1.25
PACS1-209ENST00000529757 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.24
PACS1-209ENST00000529757 PANK3Q9H999 370 aa22.83■■□□□ 1.24
PACS1-209ENST00000529757 PLEKHH1Q9ULM0 1364 aa22.83■■□□□ 1.24
PACS1-209ENST00000529757 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
PACS1-209ENST00000529757 PTPRUQ92729 1446 aa22.82■■□□□ 1.24
PACS1-209ENST00000529757 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms