RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
TGFBR3-208ENST00000529608 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.25
TGFBR3-208ENST00000529608 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
TGFBR3-208ENST00000529608 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
TGFBR3-208ENST00000529608 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
TGFBR3-208ENST00000529608 RRP7BPQ9NSQ0 103 aa13.5□□□□□ -0.25
TGFBR3-208ENST00000529608 TET3O43151 1660 aa13.49□□□□□ -0.25
TGFBR3-208ENST00000529608 DAPK1P53355 1430 aa13.48□□□□□ -0.25
TGFBR3-208ENST00000529608 KDM5AP29375 1690 aaKnown RBP13.48□□□□□ -0.25
TGFBR3-208ENST00000529608 TMEM2Q9UHN6 1383 aa13.47□□□□□ -0.25
TGFBR3-208ENST00000529608 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-208ENST00000529608 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
TGFBR3-208ENST00000529608 EFCAB6Q5THR3 1501 aa13.46□□□□□ -0.25
TGFBR3-208ENST00000529608 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
TGFBR3-208ENST00000529608 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
TGFBR3-208ENST00000529608 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.26
TGFBR3-208ENST00000529608 IDI1Q13907 227 aa13.45□□□□□ -0.26
TGFBR3-208ENST00000529608 TMEM94Q12767 1356 aa13.45□□□□□ -0.26
TGFBR3-208ENST00000529608 FGD6Q6ZV73 1430 aa13.44□□□□□ -0.26
TGFBR3-208ENST00000529608 NOS1P29475 1434 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
TGFBR3-208ENST00000529608 GCC2Q8IWJ2 1684 aa13.4□□□□□ -0.26
TGFBR3-208ENST00000529608 KCNA6P17658 529 aa13.4□□□□□ -0.26
TGFBR3-208ENST00000529608 POTEAQ6S8J7 498 aa13.4□□□□□ -0.26
TGFBR3-208ENST00000529608 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-208ENST00000529608 KANK1Q14678 1352 aa13.4□□□□□ -0.26
TGFBR3-208ENST00000529608 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-208ENST00000529608 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
TGFBR3-208ENST00000529608 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
TGFBR3-208ENST00000529608 ADGRL2O95490 1459 aa13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 PHLPP1O60346 1717 aa13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 TMEM131LA2VDJ0 1609 aa13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
TGFBR3-208ENST00000529608 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
TGFBR3-208ENST00000529608 E9PCH4 1651 aa13.34□□□□□ -0.27
TGFBR3-208ENST00000529608 UNC13BO14795 1591 aa13.32□□□□□ -0.28
TGFBR3-208ENST00000529608 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
TGFBR3-208ENST00000529608 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
TGFBR3-208ENST00000529608 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
TGFBR3-208ENST00000529608 ANKRD50Q9ULJ7 1429 aa13.31□□□□□ -0.28
TGFBR3-208ENST00000529608 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
TGFBR3-208ENST00000529608 LRP6O75581 1613 aa13.31□□□□□ -0.28
TGFBR3-208ENST00000529608 MSH6P52701 1360 aa13.31□□□□□ -0.28
TGFBR3-208ENST00000529608 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
TGFBR3-208ENST00000529608 BCANQ96GW7 911 aa13.3□□□□□ -0.28
TGFBR3-208ENST00000529608 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
TGFBR3-208ENST00000529608 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
TGFBR3-208ENST00000529608 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
TGFBR3-208ENST00000529608 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
TGFBR3-208ENST00000529608 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-208ENST00000529608 JCADQ9P266 1359 aa13.27□□□□□ -0.29
TGFBR3-208ENST00000529608 IQGAP3Q86VI3 1631 aa13.26□□□□□ -0.29
TGFBR3-208ENST00000529608 SHPRHQ149N8 1683 aa13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 NRXN3Q9Y4C0 1643 aa13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
TGFBR3-208ENST00000529608 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-208ENST00000529608 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-208ENST00000529608 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
TGFBR3-208ENST00000529608 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
TGFBR3-208ENST00000529608 TRPM2O94759 1503 aa13.21□□□□□ -0.29
TGFBR3-208ENST00000529608 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
TGFBR3-208ENST00000529608 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
TGFBR3-208ENST00000529608 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
TGFBR3-208ENST00000529608 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
TGFBR3-208ENST00000529608 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
TGFBR3-208ENST00000529608 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
TGFBR3-208ENST00000529608 SPATA31A6Q5VVP1 1343 aa13.18□□□□□ -0.3
TGFBR3-208ENST00000529608 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-208ENST00000529608 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
TGFBR3-208ENST00000529608 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
TGFBR3-208ENST00000529608 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
TGFBR3-208ENST00000529608 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
TGFBR3-208ENST00000529608 TRIM52Q96A61 297 aa13.17□□□□□ -0.3
TGFBR3-208ENST00000529608 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
TGFBR3-208ENST00000529608 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
TGFBR3-208ENST00000529608 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
TGFBR3-208ENST00000529608 MST1RQ04912 1400 aa13.16□□□□□ -0.3
TGFBR3-208ENST00000529608 ATF3P18847 181 aa13.16□□□□□ -0.3
TGFBR3-208ENST00000529608 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
TGFBR3-208ENST00000529608 NUP155O75694 1391 aa13.16□□□□□ -0.3
TGFBR3-208ENST00000529608 METP08581 1390 aa13.15□□□□□ -0.3
TGFBR3-208ENST00000529608 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
TGFBR3-208ENST00000529608 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
TGFBR3-208ENST00000529608 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
TGFBR3-208ENST00000529608 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 ITGAEP38570 1179 aa13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms