RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
VPS11-203ENST00000529545 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
VPS11-203ENST00000529545 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
VPS11-203ENST00000529545 KCNA6P17658 529 aa14.14□□□□□ -0.15
VPS11-203ENST00000529545 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
VPS11-203ENST00000529545 MAP3K1Q13233 1512 aa14.14□□□□□ -0.15
VPS11-203ENST00000529545 BCANQ96GW7 911 aa14.13□□□□□ -0.15
VPS11-203ENST00000529545 EFCAB6Q5THR3 1501 aa14.13□□□□□ -0.15
VPS11-203ENST00000529545 KDM5AP29375 1690 aaKnown RBP14.13□□□□□ -0.15
VPS11-203ENST00000529545 CROCC2H7BZ55 1655 aa14.11□□□□□ -0.15
VPS11-203ENST00000529545 ROBO1Q9Y6N7 1651 aa14.11□□□□□ -0.15
VPS11-203ENST00000529545 IDI1Q13907 227 aa14.11□□□□□ -0.15
VPS11-203ENST00000529545 POTEAQ6S8J7 498 aa14.11□□□□□ -0.15
VPS11-203ENST00000529545 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
VPS11-203ENST00000529545 ABCC5O15440 1437 aa14.1□□□□□ -0.15
VPS11-203ENST00000529545 MSH6P52701 1360 aa14.09□□□□□ -0.15
VPS11-203ENST00000529545 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.15
VPS11-203ENST00000529545 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
VPS11-203ENST00000529545 RBM33Q96EV2 1170 aaKnown RBP14.08□□□□□ -0.16
VPS11-203ENST00000529545 ANKRD30AQ9BXX3 1397 aa14.08□□□□□ -0.16
VPS11-203ENST00000529545 LMTK2Q8IWU2 1503 aa14.07□□□□□ -0.16
VPS11-203ENST00000529545 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
VPS11-203ENST00000529545 TET3O43151 1660 aa14.07□□□□□ -0.16
VPS11-203ENST00000529545 DAPK1P53355 1430 aa14.07□□□□□ -0.16
VPS11-203ENST00000529545 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
VPS11-203ENST00000529545 SLAIN2Q9P270 581 aa14.06□□□□□ -0.16
VPS11-203ENST00000529545 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 PHLPP1O60346 1717 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 ABCB7O75027 752 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 JCADQ9P266 1359 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
VPS11-203ENST00000529545 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
VPS11-203ENST00000529545 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
VPS11-203ENST00000529545 NOS1P29475 1434 aa14.04□□□□□ -0.16
VPS11-203ENST00000529545 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
VPS11-203ENST00000529545 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
VPS11-203ENST00000529545 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
VPS11-203ENST00000529545 PLEKHG1Q9ULL1 1385 aa14□□□□□ -0.17
VPS11-203ENST00000529545 CHD2O14647 1828 aaKnown RBP14□□□□□ -0.17
VPS11-203ENST00000529545 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
VPS11-203ENST00000529545 SETD1AO15047 1707 aaKnown RBP13.99□□□□□ -0.17
VPS11-203ENST00000529545 SPATA31A6Q5VVP1 1343 aa13.99□□□□□ -0.17
VPS11-203ENST00000529545 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
VPS11-203ENST00000529545 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
VPS11-203ENST00000529545 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
VPS11-203ENST00000529545 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS11-203ENST00000529545 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
VPS11-203ENST00000529545 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
VPS11-203ENST00000529545 CHGAP10645 457 aaKnown RBP13.97□□□□□ -0.17
VPS11-203ENST00000529545 ATF3P18847 181 aa13.97□□□□□ -0.17
VPS11-203ENST00000529545 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
VPS11-203ENST00000529545 ZFYVE9O95405 1425 aa13.97□□□□□ -0.17
VPS11-203ENST00000529545 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
VPS11-203ENST00000529545 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.17
VPS11-203ENST00000529545 COL16A1Q07092 1604 aaPredicted RBP13.96□□□□□ -0.17
VPS11-203ENST00000529545 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
VPS11-203ENST00000529545 C19orf44Q9H6X5 657 aa13.95□□□□□ -0.18
VPS11-203ENST00000529545 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
VPS11-203ENST00000529545 ADGRL2O95490 1459 aa13.94□□□□□ -0.18
VPS11-203ENST00000529545 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
VPS11-203ENST00000529545 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
VPS11-203ENST00000529545 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS11-203ENST00000529545 ATF5Q9Y2D1 282 aaPredicted RBP13.92□□□□□ -0.18
VPS11-203ENST00000529545 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
VPS11-203ENST00000529545 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.92□□□□□ -0.18
VPS11-203ENST00000529545 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
VPS11-203ENST00000529545 LRP6O75581 1613 aa13.91□□□□□ -0.18
VPS11-203ENST00000529545 AHDC1Q5TGY3 1603 aaPredicted RBP13.91□□□□□ -0.18
VPS11-203ENST00000529545 RXRBP28702 533 aa13.91□□□□□ -0.18
VPS11-203ENST00000529545 POLA2Q14181 598 aa13.91□□□□□ -0.18
VPS11-203ENST00000529545 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
VPS11-203ENST00000529545 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
VPS11-203ENST00000529545 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
VPS11-203ENST00000529545 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
VPS11-203ENST00000529545 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
VPS11-203ENST00000529545 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
VPS11-203ENST00000529545 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
VPS11-203ENST00000529545 TRPM2O94759 1503 aa13.88□□□□□ -0.19
VPS11-203ENST00000529545 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
VPS11-203ENST00000529545 UNC13BO14795 1591 aa13.86□□□□□ -0.19
VPS11-203ENST00000529545 E9PCH4 1651 aa13.85□□□□□ -0.19
VPS11-203ENST00000529545 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
VPS11-203ENST00000529545 DCCP43146 1447 aa13.84□□□□□ -0.19
VPS11-203ENST00000529545 LRRC59Q96AG4 307 aaKnown RBP13.84□□□□□ -0.19
VPS11-203ENST00000529545 AFF2P51816 1311 aa13.84□□□□□ -0.19
VPS11-203ENST00000529545 IQGAP3Q86VI3 1631 aa13.82□□□□□ -0.2
VPS11-203ENST00000529545 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
VPS11-203ENST00000529545 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
VPS11-203ENST00000529545 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
VPS11-203ENST00000529545 NUP155O75694 1391 aa13.81□□□□□ -0.2
VPS11-203ENST00000529545 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
VPS11-203ENST00000529545 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
VPS11-203ENST00000529545 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
VPS11-203ENST00000529545 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
VPS11-203ENST00000529545 NHSL1Q5SYE7 1610 aa13.79□□□□□ -0.2
VPS11-203ENST00000529545 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
VPS11-203ENST00000529545 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
VPS11-203ENST00000529545 MST1RQ04912 1400 aa13.79□□□□□ -0.2
VPS11-203ENST00000529545 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms