RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 ZFYVE9O95405 1425 aa17■□□□□ 0.31
C9orf135-207ENST00000529446 NEUROD1Q13562 356 aa17■□□□□ 0.31
C9orf135-207ENST00000529446 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
C9orf135-207ENST00000529446 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
C9orf135-207ENST00000529446 NEXMIFQ5QGS0 1516 aa16.99■□□□□ 0.31
C9orf135-207ENST00000529446 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
C9orf135-207ENST00000529446 MYO5BQ9ULV0 1848 aa16.98■□□□□ 0.31
C9orf135-207ENST00000529446 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
C9orf135-207ENST00000529446 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
C9orf135-207ENST00000529446 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
C9orf135-207ENST00000529446 MYOM2P54296 1465 aa16.96■□□□□ 0.31
C9orf135-207ENST00000529446 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
C9orf135-207ENST00000529446 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
C9orf135-207ENST00000529446 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
C9orf135-207ENST00000529446 PPLO60437 1756 aa16.94■□□□□ 0.3
C9orf135-207ENST00000529446 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
C9orf135-207ENST00000529446 MED14O60244 1454 aa16.93■□□□□ 0.3
C9orf135-207ENST00000529446 HSPA2P54652 639 aa16.93■□□□□ 0.3
C9orf135-207ENST00000529446 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
C9orf135-207ENST00000529446 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
C9orf135-207ENST00000529446 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
C9orf135-207ENST00000529446 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
C9orf135-207ENST00000529446 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
C9orf135-207ENST00000529446 LTKP29376 864 aa16.91■□□□□ 0.3
C9orf135-207ENST00000529446 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
C9orf135-207ENST00000529446 NPHP4O75161 1426 aaPredicted RBP16.88■□□□□ 0.29
C9orf135-207ENST00000529446 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
C9orf135-207ENST00000529446 NCKAP5LQ9HCH0 1330 aa16.88■□□□□ 0.29
C9orf135-207ENST00000529446 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
C9orf135-207ENST00000529446 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
C9orf135-207ENST00000529446 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
C9orf135-207ENST00000529446 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
C9orf135-207ENST00000529446 STRCQ7RTU9 1775 aa16.86■□□□□ 0.29
C9orf135-207ENST00000529446 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
C9orf135-207ENST00000529446 IQGAP1P46940 1657 aa16.85■□□□□ 0.29
C9orf135-207ENST00000529446 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
C9orf135-207ENST00000529446 LAMC1P11047 1609 aa16.85■□□□□ 0.29
C9orf135-207ENST00000529446 BCANQ96GW7 911 aa16.83■□□□□ 0.28
C9orf135-207ENST00000529446 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
C9orf135-207ENST00000529446 NRXN3Q9Y4C0 1643 aa16.82■□□□□ 0.28
C9orf135-207ENST00000529446 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
C9orf135-207ENST00000529446 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
C9orf135-207ENST00000529446 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
C9orf135-207ENST00000529446 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
C9orf135-207ENST00000529446 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
C9orf135-207ENST00000529446 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
C9orf135-207ENST00000529446 SLC26A8Q96RN1 970 aa16.78■□□□□ 0.28
C9orf135-207ENST00000529446 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
C9orf135-207ENST00000529446 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
C9orf135-207ENST00000529446 TRPM1Q7Z4N2 1603 aa16.77■□□□□ 0.27
C9orf135-207ENST00000529446 CFAP70Q5T0N1 1121 aa16.76■□□□□ 0.27
C9orf135-207ENST00000529446 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
C9orf135-207ENST00000529446 GPRASP1Q5JY77 1395 aa16.74■□□□□ 0.27
C9orf135-207ENST00000529446 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
C9orf135-207ENST00000529446 METP08581 1390 aa16.73■□□□□ 0.27
C9orf135-207ENST00000529446 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
C9orf135-207ENST00000529446 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
C9orf135-207ENST00000529446 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
C9orf135-207ENST00000529446 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
C9orf135-207ENST00000529446 KCNA6P17658 529 aa16.71■□□□□ 0.27
C9orf135-207ENST00000529446 TECPR2O15040 1411 aa16.7■□□□□ 0.26
C9orf135-207ENST00000529446 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
C9orf135-207ENST00000529446 ABCC11Q96J66 1382 aa16.7■□□□□ 0.26
C9orf135-207ENST00000529446 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
C9orf135-207ENST00000529446 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
C9orf135-207ENST00000529446 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
C9orf135-207ENST00000529446 XRN1Q8IZH2 1706 aaKnown RBP16.68■□□□□ 0.26
C9orf135-207ENST00000529446 NBPF1Q3BBV0 1214 aa16.68■□□□□ 0.26
C9orf135-207ENST00000529446 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
C9orf135-207ENST00000529446 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
C9orf135-207ENST00000529446 DLC1Q96QB1 1528 aa16.68■□□□□ 0.26
C9orf135-207ENST00000529446 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
C9orf135-207ENST00000529446 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
C9orf135-207ENST00000529446 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
C9orf135-207ENST00000529446 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
C9orf135-207ENST00000529446 CPS1P31327 1500 aa16.66■□□□□ 0.26
C9orf135-207ENST00000529446 FAM135BQ49AJ0 1406 aa16.66■□□□□ 0.26
C9orf135-207ENST00000529446 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
C9orf135-207ENST00000529446 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
C9orf135-207ENST00000529446 STK26Q9P289 416 aa16.63■□□□□ 0.25
C9orf135-207ENST00000529446 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
C9orf135-207ENST00000529446 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
C9orf135-207ENST00000529446 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
C9orf135-207ENST00000529446 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
C9orf135-207ENST00000529446 ARHGEF28Q8N1W1 1705 aaKnown RBP16.6■□□□□ 0.25
C9orf135-207ENST00000529446 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
C9orf135-207ENST00000529446 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
C9orf135-207ENST00000529446 PROSER2Q86WR7 435 aaPredicted RBP16.59■□□□□ 0.25
C9orf135-207ENST00000529446 USP47Q96K76 1375 aa16.59■□□□□ 0.25
C9orf135-207ENST00000529446 POGKQ9P215 609 aa16.58■□□□□ 0.24
C9orf135-207ENST00000529446 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
C9orf135-207ENST00000529446 LRRC7Q96NW7 1537 aa16.58■□□□□ 0.24
C9orf135-207ENST00000529446 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
C9orf135-207ENST00000529446 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
C9orf135-207ENST00000529446 SBNO2Q9Y2G9 1366 aa16.56■□□□□ 0.24
C9orf135-207ENST00000529446 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
C9orf135-207ENST00000529446 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
C9orf135-207ENST00000529446 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
C9orf135-207ENST00000529446 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
C9orf135-207ENST00000529446 DCCP43146 1447 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms