RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PRAG1Q86YV5 1406 aa35.31■■■■□ 3.24
LDLRAD3-203ENST00000528989 STAC3Q96MF2 364 aa35.29■■■■□ 3.24
LDLRAD3-203ENST00000528989 CEP170BQ9Y4F5 1589 aaPredicted RBP35.27■■■■□ 3.24
LDLRAD3-203ENST00000528989 TMEM2Q9UHN6 1383 aa35.27■■■■□ 3.24
LDLRAD3-203ENST00000528989 VGFO15240 615 aaPredicted RBP35.27■■■■□ 3.24
LDLRAD3-203ENST00000528989 THEMISQ8N1K5 641 aaPredicted RBP35.27■■■■□ 3.24
LDLRAD3-203ENST00000528989 RIMS2Q9UQ26 1411 aa35.27■■■■□ 3.24
LDLRAD3-203ENST00000528989 IFT172Q9UG01 1749 aa35.26■■■■□ 3.24
LDLRAD3-203ENST00000528989 PPLO60437 1756 aa35.26■■■■□ 3.24
LDLRAD3-203ENST00000528989 MYOM2P54296 1465 aa35.24■■■■□ 3.23
LDLRAD3-203ENST00000528989 ZFYVE9O95405 1425 aa35.24■■■■□ 3.23
LDLRAD3-203ENST00000528989 KDM5AP29375 1690 aaKnown RBP35.23■■■■□ 3.23
LDLRAD3-203ENST00000528989 LTKP29376 864 aa35.22■■■■□ 3.23
LDLRAD3-203ENST00000528989 NBPF1Q3BBV0 1214 aa35.22■■■■□ 3.23
LDLRAD3-203ENST00000528989 NRXN1Q9ULB1 1477 aa35.19■■■■□ 3.22
LDLRAD3-203ENST00000528989 CFAP70Q5T0N1 1121 aa35.18■■■■□ 3.22
LDLRAD3-203ENST00000528989 TXNDC2Q86VQ3 553 aa35.18■■■■□ 3.22
LDLRAD3-203ENST00000528989 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.16■■■■□ 3.22
LDLRAD3-203ENST00000528989 PIK3C2GO75747 1445 aa35.15■■■■□ 3.22
LDLRAD3-203ENST00000528989 ZNF142P52746 1687 aaPredicted RBP35.15■■■■□ 3.22
LDLRAD3-203ENST00000528989 HDGFP51858 240 aaKnown RBP35.15■■■■□ 3.22
LDLRAD3-203ENST00000528989 ARHGAP23Q9P227 1491 aa35.13■■■■□ 3.21
LDLRAD3-203ENST00000528989 SLIT1O75093 1534 aa35.13■■■■□ 3.21
LDLRAD3-203ENST00000528989 EID1Q9Y6B2 187 aa35.12■■■■□ 3.21
LDLRAD3-203ENST00000528989 ROCK2O75116 1388 aaKnown RBP35.12■■■■□ 3.21
LDLRAD3-203ENST00000528989 RALGAPBQ86X10 1494 aa35.11■■■■□ 3.21
LDLRAD3-203ENST00000528989 C14orf93Q9H972 538 aaKnown RBP35.1■■■■□ 3.21
LDLRAD3-203ENST00000528989 TRPM1Q7Z4N2 1603 aa35.09■■■■□ 3.21
LDLRAD3-203ENST00000528989 CARD11Q9BXL7 1154 aa35.08■■■■□ 3.21
LDLRAD3-203ENST00000528989 HSPA2P54652 639 aa35.07■■■■□ 3.2
LDLRAD3-203ENST00000528989 TMEM132EQ6IEE7 984 aa35.05■■■■□ 3.2
LDLRAD3-203ENST00000528989 BCANQ96GW7 911 aa35.05■■■■□ 3.2
LDLRAD3-203ENST00000528989 HIRIP3Q9BW71 556 aaPredicted RBP35.05■■■■□ 3.2
LDLRAD3-203ENST00000528989 ANKLE2Q86XL3 938 aa35.04■■■■□ 3.2
LDLRAD3-203ENST00000528989 SCAF11Q99590 1463 aaKnown RBP35.02■■■■□ 3.2
LDLRAD3-203ENST00000528989 LMTK3Q96Q04 1460 aa35■■■■□ 3.19
LDLRAD3-203ENST00000528989 GPRASP1Q5JY77 1395 aa35■■■■□ 3.19
LDLRAD3-203ENST00000528989 PLEKHG1Q9ULL1 1385 aa34.99■■■■□ 3.19
LDLRAD3-203ENST00000528989 NCKAP5LQ9HCH0 1330 aa34.97■■■■□ 3.19
LDLRAD3-203ENST00000528989 SLC26A8Q96RN1 970 aa34.97■■■■□ 3.19
LDLRAD3-203ENST00000528989 ALKQ9UM73 1620 aa34.96■■■■□ 3.19
LDLRAD3-203ENST00000528989 HSPA5P11021 654 aaKnown RBP34.95■■■■□ 3.19
LDLRAD3-203ENST00000528989 NRXN3Q9Y4C0 1643 aa34.95■■■■□ 3.18
LDLRAD3-203ENST00000528989 EIF4G2P78344 907 aaKnown RBP eCLIP34.95■■■■□ 3.186e-6■■■■■ 27.4
LDLRAD3-203ENST00000528989 KIAA1210Q9ULL0 1709 aa34.94■■■■□ 3.18
LDLRAD3-203ENST00000528989 USP47Q96K76 1375 aa34.93■■■■□ 3.18
LDLRAD3-203ENST00000528989 ADAMTS13Q76LX8 1427 aa34.92■■■■□ 3.18
LDLRAD3-203ENST00000528989 SETBP1Q9Y6X0 1596 aa34.92■■■■□ 3.18
LDLRAD3-203ENST00000528989 ADGRB1O14514 1584 aa34.91■■■■□ 3.18
LDLRAD3-203ENST00000528989 IQGAP1P46940 1657 aa34.9■■■■□ 3.18
LDLRAD3-203ENST00000528989 METP08581 1390 aa34.9■■■■□ 3.18
LDLRAD3-203ENST00000528989 ASXL1Q8IXJ9 1541 aa34.88■■■■□ 3.17
LDLRAD3-203ENST00000528989 STK26Q9P289 416 aa34.88■■■■□ 3.17
LDLRAD3-203ENST00000528989 TRAK1Q9UPV9 953 aa34.88■■■■□ 3.17
LDLRAD3-203ENST00000528989 ST20-MTHFSA0A0A6YYL1 179 aa34.85■■■■□ 3.17
LDLRAD3-203ENST00000528989 LAMC1P11047 1609 aa34.84■■■■□ 3.17
LDLRAD3-203ENST00000528989 MED14O60244 1454 aa34.84■■■■□ 3.17
LDLRAD3-203ENST00000528989 TBX22Q9Y458 520 aa34.83■■■■□ 3.17
LDLRAD3-203ENST00000528989 SETD1AO15047 1707 aaKnown RBP34.83■■■■□ 3.17
LDLRAD3-203ENST00000528989 ZNF316A6NFI3 1004 aaPredicted RBP34.82■■■■□ 3.16
LDLRAD3-203ENST00000528989 NPHP4O75161 1426 aaPredicted RBP34.81■■■■□ 3.16
LDLRAD3-203ENST00000528989 YTHDC2Q9H6S0 1430 aaKnown RBP34.78■■■■□ 3.16
LDLRAD3-203ENST00000528989 POLR1AO95602 1720 aaPredicted RBP34.76■■■■□ 3.15
LDLRAD3-203ENST00000528989 PTPRUQ92729 1446 aa34.72■■■■□ 3.15
LDLRAD3-203ENST00000528989 LRPPRCP42704 1394 aaKnown RBP34.72■■■■□ 3.15
LDLRAD3-203ENST00000528989 C11orf95C9JLR9 678 aaPredicted RBP34.7■■■■□ 3.15
LDLRAD3-203ENST00000528989 TESK2Q96S53 571 aa34.69■■■■□ 3.14
LDLRAD3-203ENST00000528989 SAFB2Q14151 953 aaKnown RBP eCLIP34.69■■■■□ 3.143e-6■□□□□ 11.2
LDLRAD3-203ENST00000528989 AMOTL2Q9Y2J4 779 aa34.69■■■■□ 3.14
LDLRAD3-203ENST00000528989 STRCQ7RTU9 1775 aa34.68■■■■□ 3.14
LDLRAD3-203ENST00000528989 ABCC11Q96J66 1382 aa34.68■■■■□ 3.14
LDLRAD3-203ENST00000528989 EIF3AQ14152 1382 aaKnown RBP34.67■■■■□ 3.14
LDLRAD3-203ENST00000528989 DIP2AQ14689 1571 aa34.67■■■■□ 3.14
LDLRAD3-203ENST00000528989 WAPLQ7Z5K2 1190 aa34.67■■■■□ 3.14
LDLRAD3-203ENST00000528989 PRAM1Q96QH2 718 aa34.67■■■■□ 3.14
LDLRAD3-203ENST00000528989 CENPJQ9HC77 1338 aaPredicted RBP34.65■■■■□ 3.14
LDLRAD3-203ENST00000528989 AEBP2Q6ZN18 517 aaPredicted RBP34.63■■■■□ 3.13
LDLRAD3-203ENST00000528989 PLEKHH1Q9ULM0 1364 aa34.62■■■■□ 3.13
LDLRAD3-203ENST00000528989 KCNA6P17658 529 aa34.61■■■■□ 3.13
LDLRAD3-203ENST00000528989 POGKQ9P215 609 aa34.61■■■■□ 3.13
LDLRAD3-203ENST00000528989 ROBO2Q9HCK4 1378 aa34.61■■■■□ 3.13
LDLRAD3-203ENST00000528989 ARHGEF28Q8N1W1 1705 aaKnown RBP34.6■■■■□ 3.13
LDLRAD3-203ENST00000528989 PIK3R4Q99570 1358 aa34.59■■■■□ 3.13
LDLRAD3-203ENST00000528989 TECPR2O15040 1411 aa34.58■■■■□ 3.13
LDLRAD3-203ENST00000528989 WASHC2AQ641Q2 1341 aa34.56■■■■□ 3.12
LDLRAD3-203ENST00000528989 DLC1Q96QB1 1528 aa34.54■■■■□ 3.12
LDLRAD3-203ENST00000528989 DISP3Q9P2K9 1392 aa34.54■■■■□ 3.12
LDLRAD3-203ENST00000528989 SIRT1Q96EB6 747 aa34.53■■■■□ 3.12
LDLRAD3-203ENST00000528989 KIF7Q2M1P5 1343 aa34.52■■■■□ 3.12
LDLRAD3-203ENST00000528989 MINK1Q8N4C8 1332 aaPredicted RBP34.52■■■■□ 3.12
LDLRAD3-203ENST00000528989 RBM33Q96EV2 1170 aaKnown RBP34.51■■■■□ 3.12
LDLRAD3-203ENST00000528989 POLR3GLQ9BT43 218 aa34.51■■■■□ 3.12
LDLRAD3-203ENST00000528989 TMF1P82094 1093 aa34.5■■■■□ 3.11
LDLRAD3-203ENST00000528989 CPS1P31327 1500 aa34.5■■■■□ 3.11
LDLRAD3-203ENST00000528989 FAM135BQ49AJ0 1406 aa34.5■■■■□ 3.11
LDLRAD3-203ENST00000528989 CHD2O14647 1828 aaKnown RBP34.49■■■■□ 3.11
LDLRAD3-203ENST00000528989 KNDC1Q76NI1 1749 aa34.48■■■■□ 3.11
LDLRAD3-203ENST00000528989 XRN1Q8IZH2 1706 aaKnown RBP34.48■■■■□ 3.11
LDLRAD3-203ENST00000528989 QRICH2Q9H0J4 1663 aa34.48■■■■□ 3.11
LDLRAD3-203ENST00000528989 SBNO2Q9Y2G9 1366 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms