RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
USF1-208ENST00000528768 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
USF1-208ENST00000528768 CEP152O94986 1710 aa16.87■□□□□ 0.29
USF1-208ENST00000528768 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
USF1-208ENST00000528768 CFAP65Q6ZU64 1925 aaKnown RBP16.85■□□□□ 0.29
USF1-208ENST00000528768 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
USF1-208ENST00000528768 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
USF1-208ENST00000528768 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
USF1-208ENST00000528768 PIK3C2BO00750 1634 aa16.84■□□□□ 0.29
USF1-208ENST00000528768 TET3O43151 1660 aa16.84■□□□□ 0.29
USF1-208ENST00000528768 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
USF1-208ENST00000528768 NAIPQ13075 1403 aa16.82■□□□□ 0.28
USF1-208ENST00000528768 KANK1Q14678 1352 aa16.82■□□□□ 0.28
USF1-208ENST00000528768 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
USF1-208ENST00000528768 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
USF1-208ENST00000528768 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
USF1-208ENST00000528768 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
USF1-208ENST00000528768 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
USF1-208ENST00000528768 RXRBP28702 533 aa16.79■□□□□ 0.28
USF1-208ENST00000528768 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
USF1-208ENST00000528768 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
USF1-208ENST00000528768 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
USF1-208ENST00000528768 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
USF1-208ENST00000528768 IDI1Q13907 227 aa16.77■□□□□ 0.28
USF1-208ENST00000528768 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
USF1-208ENST00000528768 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
USF1-208ENST00000528768 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
USF1-208ENST00000528768 BCANQ96GW7 911 aa16.76■□□□□ 0.27
USF1-208ENST00000528768 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
USF1-208ENST00000528768 LRP6O75581 1613 aa16.75■□□□□ 0.27
USF1-208ENST00000528768 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
USF1-208ENST00000528768 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
USF1-208ENST00000528768 FOXD1Q16676 465 aa16.74■□□□□ 0.27
USF1-208ENST00000528768 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
USF1-208ENST00000528768 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
USF1-208ENST00000528768 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
USF1-208ENST00000528768 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
USF1-208ENST00000528768 DAPK1P53355 1430 aa16.73■□□□□ 0.27
USF1-208ENST00000528768 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
USF1-208ENST00000528768 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
USF1-208ENST00000528768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
USF1-208ENST00000528768 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
USF1-208ENST00000528768 PLEKHG1Q9ULL1 1385 aa16.72■□□□□ 0.27
USF1-208ENST00000528768 NOS1P29475 1434 aa16.7■□□□□ 0.26
USF1-208ENST00000528768 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
USF1-208ENST00000528768 ATF3P18847 181 aa16.7■□□□□ 0.26
USF1-208ENST00000528768 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
USF1-208ENST00000528768 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
USF1-208ENST00000528768 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
USF1-208ENST00000528768 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
USF1-208ENST00000528768 ABCC5O15440 1437 aa16.69■□□□□ 0.26
USF1-208ENST00000528768 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
USF1-208ENST00000528768 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
USF1-208ENST00000528768 MIER1Q8N108 512 aa16.66■□□□□ 0.26
USF1-208ENST00000528768 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
USF1-208ENST00000528768 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
USF1-208ENST00000528768 SRCAPQ6ZRS2 3230 aa16.65■□□□□ 0.26
USF1-208ENST00000528768 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
USF1-208ENST00000528768 AFF2P51816 1311 aa16.65■□□□□ 0.26
USF1-208ENST00000528768 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
USF1-208ENST00000528768 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
USF1-208ENST00000528768 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
USF1-208ENST00000528768 ANKRD30AQ9BXX3 1397 aa16.63■□□□□ 0.25
USF1-208ENST00000528768 DCCP43146 1447 aa16.62■□□□□ 0.25
USF1-208ENST00000528768 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
USF1-208ENST00000528768 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
USF1-208ENST00000528768 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
USF1-208ENST00000528768 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
USF1-208ENST00000528768 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
USF1-208ENST00000528768 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
USF1-208ENST00000528768 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
USF1-208ENST00000528768 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
USF1-208ENST00000528768 QTRT2Q9H974 415 aaKnown RBP16.6■□□□□ 0.25
USF1-208ENST00000528768 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
USF1-208ENST00000528768 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
USF1-208ENST00000528768 RGS12O14924 1447 aa16.59■□□□□ 0.25
USF1-208ENST00000528768 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.24
USF1-208ENST00000528768 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
USF1-208ENST00000528768 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
USF1-208ENST00000528768 TRPM2O94759 1503 aa16.55■□□□□ 0.24
USF1-208ENST00000528768 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
USF1-208ENST00000528768 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
USF1-208ENST00000528768 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
USF1-208ENST00000528768 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
USF1-208ENST00000528768 CCDC125Q86Z20 511 aa16.53■□□□□ 0.24
USF1-208ENST00000528768 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
USF1-208ENST00000528768 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
USF1-208ENST00000528768 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.23
USF1-208ENST00000528768 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
USF1-208ENST00000528768 MST1RQ04912 1400 aa16.5■□□□□ 0.23
USF1-208ENST00000528768 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
USF1-208ENST00000528768 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
USF1-208ENST00000528768 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
USF1-208ENST00000528768 TRPC5Q9UL62 973 aaPredicted RBP16.48■□□□□ 0.23
USF1-208ENST00000528768 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
USF1-208ENST00000528768 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
USF1-208ENST00000528768 USP21Q9UK80 565 aa16.45■□□□□ 0.22
USF1-208ENST00000528768 PTCH1Q13635 1447 aa16.45■□□□□ 0.22
USF1-208ENST00000528768 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
USF1-208ENST00000528768 UNC13BO14795 1591 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms