RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
SRPRA-203ENST00000528744 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
SRPRA-203ENST00000528744 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
SRPRA-203ENST00000528744 BCANQ96GW7 911 aa17.69■□□□□ 0.42
SRPRA-203ENST00000528744 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
SRPRA-203ENST00000528744 ADGRB3O60242 1522 aa17.67■□□□□ 0.42
SRPRA-203ENST00000528744 UNC13BO14795 1591 aa17.65■□□□□ 0.42
SRPRA-203ENST00000528744 PLEKHG1Q9ULL1 1385 aa17.65■□□□□ 0.42
SRPRA-203ENST00000528744 TBX22Q9Y458 520 aa17.64■□□□□ 0.41
SRPRA-203ENST00000528744 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
SRPRA-203ENST00000528744 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
SRPRA-203ENST00000528744 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
SRPRA-203ENST00000528744 XIRP1Q702N8 1843 aaKnown RBP17.62■□□□□ 0.41
SRPRA-203ENST00000528744 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
SRPRA-203ENST00000528744 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
SRPRA-203ENST00000528744 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
SRPRA-203ENST00000528744 E9PCH4 1651 aa17.61■□□□□ 0.41
SRPRA-203ENST00000528744 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRPRA-203ENST00000528744 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
SRPRA-203ENST00000528744 FAM135BQ49AJ0 1406 aa17.6■□□□□ 0.41
SRPRA-203ENST00000528744 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
SRPRA-203ENST00000528744 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.41
SRPRA-203ENST00000528744 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
SRPRA-203ENST00000528744 NAIPQ13075 1403 aa17.57■□□□□ 0.4
SRPRA-203ENST00000528744 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
SRPRA-203ENST00000528744 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
SRPRA-203ENST00000528744 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
SRPRA-203ENST00000528744 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
SRPRA-203ENST00000528744 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
SRPRA-203ENST00000528744 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
SRPRA-203ENST00000528744 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
SRPRA-203ENST00000528744 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
SRPRA-203ENST00000528744 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
SRPRA-203ENST00000528744 MSH6P52701 1360 aa17.51■□□□□ 0.39
SRPRA-203ENST00000528744 METP08581 1390 aa17.5■□□□□ 0.39
SRPRA-203ENST00000528744 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
SRPRA-203ENST00000528744 CHD2O14647 1828 aaKnown RBP17.48■□□□□ 0.39
SRPRA-203ENST00000528744 PIK3R4Q99570 1358 aa17.47■□□□□ 0.39
SRPRA-203ENST00000528744 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
SRPRA-203ENST00000528744 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
SRPRA-203ENST00000528744 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
SRPRA-203ENST00000528744 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
SRPRA-203ENST00000528744 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
SRPRA-203ENST00000528744 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
SRPRA-203ENST00000528744 ATF3P18847 181 aa17.42■□□□□ 0.38
SRPRA-203ENST00000528744 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
SRPRA-203ENST00000528744 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
SRPRA-203ENST00000528744 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
SRPRA-203ENST00000528744 BRINP3Q76B58 766 aa17.41■□□□□ 0.38
SRPRA-203ENST00000528744 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.37
SRPRA-203ENST00000528744 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
SRPRA-203ENST00000528744 TRPM2O94759 1503 aa17.38■□□□□ 0.37
SRPRA-203ENST00000528744 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
SRPRA-203ENST00000528744 SETBP1Q9Y6X0 1596 aa17.38■□□□□ 0.37
SRPRA-203ENST00000528744 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
SRPRA-203ENST00000528744 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
SRPRA-203ENST00000528744 JCADQ9P266 1359 aa17.37■□□□□ 0.37
SRPRA-203ENST00000528744 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-203ENST00000528744 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-203ENST00000528744 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
SRPRA-203ENST00000528744 MST1RQ04912 1400 aa17.33■□□□□ 0.36
SRPRA-203ENST00000528744 ROBO2Q9HCK4 1378 aa17.33■□□□□ 0.36
SRPRA-203ENST00000528744 RPGRIP1LQ68CZ1 1315 aa17.33■□□□□ 0.36
SRPRA-203ENST00000528744 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
SRPRA-203ENST00000528744 XRN1Q8IZH2 1706 aaKnown RBP17.32■□□□□ 0.36
SRPRA-203ENST00000528744 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
SRPRA-203ENST00000528744 LRP6O75581 1613 aa17.31■□□□□ 0.36
SRPRA-203ENST00000528744 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
SRPRA-203ENST00000528744 ORAI2Q96SN7 254 aa17.29■□□□□ 0.36
SRPRA-203ENST00000528744 MSH5O43196 834 aa17.28■□□□□ 0.36
SRPRA-203ENST00000528744 DCCP43146 1447 aa17.28■□□□□ 0.36
SRPRA-203ENST00000528744 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
SRPRA-203ENST00000528744 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.36
SRPRA-203ENST00000528744 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-203ENST00000528744 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-203ENST00000528744 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
SRPRA-203ENST00000528744 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-203ENST00000528744 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-203ENST00000528744 SPATA31E1Q6ZUB1 1445 aa17.27■□□□□ 0.35
SRPRA-203ENST00000528744 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
SRPRA-203ENST00000528744 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
SRPRA-203ENST00000528744 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
SRPRA-203ENST00000528744 STK26Q9P289 416 aa17.24■□□□□ 0.35
SRPRA-203ENST00000528744 SETD5Q9C0A6 1442 aa17.23■□□□□ 0.35
SRPRA-203ENST00000528744 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
SRPRA-203ENST00000528744 KIF1BO60333 1816 aa17.23■□□□□ 0.35
SRPRA-203ENST00000528744 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
SRPRA-203ENST00000528744 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
SRPRA-203ENST00000528744 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
SRPRA-203ENST00000528744 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
SRPRA-203ENST00000528744 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
SRPRA-203ENST00000528744 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
SRPRA-203ENST00000528744 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SRPRA-203ENST00000528744 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
SRPRA-203ENST00000528744 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
SRPRA-203ENST00000528744 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
SRPRA-203ENST00000528744 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
SRPRA-203ENST00000528744 NALCNQ8IZF0 1738 aa17.18■□□□□ 0.34
SRPRA-203ENST00000528744 ZNF772Q68DY9 489 aaPredicted RBP17.17■□□□□ 0.34
SRPRA-203ENST00000528744 C14orf93Q9H972 538 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms