RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
CMTM1-210ENST00000528441 E9PCH4 1651 aa13.6□□□□□ -0.23
CMTM1-210ENST00000528441 CPS1P31327 1500 aa13.59□□□□□ -0.23
CMTM1-210ENST00000528441 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
CMTM1-210ENST00000528441 NOS1P29475 1434 aa13.59□□□□□ -0.23
CMTM1-210ENST00000528441 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
CMTM1-210ENST00000528441 LTKP29376 864 aa13.58□□□□□ -0.24
CMTM1-210ENST00000528441 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
CMTM1-210ENST00000528441 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
CMTM1-210ENST00000528441 MED14O60244 1454 aa13.58□□□□□ -0.24
CMTM1-210ENST00000528441 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
CMTM1-210ENST00000528441 SLIT1O75093 1534 aa13.58□□□□□ -0.24
CMTM1-210ENST00000528441 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
CMTM1-210ENST00000528441 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
CMTM1-210ENST00000528441 NAIPQ13075 1403 aa13.56□□□□□ -0.24
CMTM1-210ENST00000528441 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
CMTM1-210ENST00000528441 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
CMTM1-210ENST00000528441 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
CMTM1-210ENST00000528441 TOM1O60784 492 aa13.55□□□□□ -0.24
CMTM1-210ENST00000528441 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
CMTM1-210ENST00000528441 SPHKAPQ2M3C7 1700 aa13.55□□□□□ -0.24
CMTM1-210ENST00000528441 RIMS2Q9UQ26 1411 aa13.55□□□□□ -0.24
CMTM1-210ENST00000528441 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
CMTM1-210ENST00000528441 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
CMTM1-210ENST00000528441 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
CMTM1-210ENST00000528441 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
CMTM1-210ENST00000528441 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
CMTM1-210ENST00000528441 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
CMTM1-210ENST00000528441 KIF1BO60333 1816 aa13.48□□□□□ -0.25
CMTM1-210ENST00000528441 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
CMTM1-210ENST00000528441 PROSER2Q86WR7 435 aaPredicted RBP13.48□□□□□ -0.25
CMTM1-210ENST00000528441 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
CMTM1-210ENST00000528441 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
CMTM1-210ENST00000528441 TRPM2O94759 1503 aa13.45□□□□□ -0.26
CMTM1-210ENST00000528441 KCNA6P17658 529 aa13.45□□□□□ -0.26
CMTM1-210ENST00000528441 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
CMTM1-210ENST00000528441 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
CMTM1-210ENST00000528441 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
CMTM1-210ENST00000528441 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-210ENST00000528441 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
CMTM1-210ENST00000528441 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
CMTM1-210ENST00000528441 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
CMTM1-210ENST00000528441 MSH6P52701 1360 aa13.42□□□□□ -0.26
CMTM1-210ENST00000528441 CCDC144AA2RUR9 1427 aa13.41□□□□□ -0.26
CMTM1-210ENST00000528441 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
CMTM1-210ENST00000528441 NKTRP30414 1462 aaKnown RBP13.41□□□□□ -0.26
CMTM1-210ENST00000528441 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
CMTM1-210ENST00000528441 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
CMTM1-210ENST00000528441 HSPA1LP34931 641 aa13.4□□□□□ -0.26
CMTM1-210ENST00000528441 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
CMTM1-210ENST00000528441 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
CMTM1-210ENST00000528441 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
CMTM1-210ENST00000528441 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
CMTM1-210ENST00000528441 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
CMTM1-210ENST00000528441 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
CMTM1-210ENST00000528441 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
CMTM1-210ENST00000528441 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
CMTM1-210ENST00000528441 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
CMTM1-210ENST00000528441 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
CMTM1-210ENST00000528441 ATF3P18847 181 aa13.35□□□□□ -0.27
CMTM1-210ENST00000528441 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
CMTM1-210ENST00000528441 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
CMTM1-210ENST00000528441 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
CMTM1-210ENST00000528441 PPLO60437 1756 aa13.31□□□□□ -0.28
CMTM1-210ENST00000528441 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
CMTM1-210ENST00000528441 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
CMTM1-210ENST00000528441 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
CMTM1-210ENST00000528441 ALKQ9UM73 1620 aa13.29□□□□□ -0.28
CMTM1-210ENST00000528441 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
CMTM1-210ENST00000528441 METP08581 1390 aa13.29□□□□□ -0.28
CMTM1-210ENST00000528441 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
CMTM1-210ENST00000528441 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
CMTM1-210ENST00000528441 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.28
CMTM1-210ENST00000528441 STK26Q9P289 416 aa13.27□□□□□ -0.29
CMTM1-210ENST00000528441 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
CMTM1-210ENST00000528441 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-210ENST00000528441 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
CMTM1-210ENST00000528441 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
CMTM1-210ENST00000528441 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
CMTM1-210ENST00000528441 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
CMTM1-210ENST00000528441 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
CMTM1-210ENST00000528441 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
CMTM1-210ENST00000528441 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
CMTM1-210ENST00000528441 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
CMTM1-210ENST00000528441 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
CMTM1-210ENST00000528441 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
CMTM1-210ENST00000528441 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
CMTM1-210ENST00000528441 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
CMTM1-210ENST00000528441 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.3
CMTM1-210ENST00000528441 NALCNQ8IZF0 1738 aa13.21□□□□□ -0.3
CMTM1-210ENST00000528441 PTCH1Q13635 1447 aa13.21□□□□□ -0.3
CMTM1-210ENST00000528441 DCAF11Q8TEB1 546 aa13.2□□□□□ -0.3
CMTM1-210ENST00000528441 DCCP43146 1447 aa13.2□□□□□ -0.3
CMTM1-210ENST00000528441 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
CMTM1-210ENST00000528441 HRCP23327 699 aa13.19□□□□□ -0.3
CMTM1-210ENST00000528441 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
CMTM1-210ENST00000528441 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
CMTM1-210ENST00000528441 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
CMTM1-210ENST00000528441 JCADQ9P266 1359 aa13.18□□□□□ -0.3
CMTM1-210ENST00000528441 LAMC1P11047 1609 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms