RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 CFAP70Q5T0N1 1121 aa19.57■□□□□ 0.72
CHEK1-210ENST00000528276 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
CHEK1-210ENST00000528276 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
CHEK1-210ENST00000528276 SYNMO15061 1565 aa19.55■□□□□ 0.72
CHEK1-210ENST00000528276 SCAF11Q99590 1463 aaKnown RBP19.55■□□□□ 0.72
CHEK1-210ENST00000528276 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
CHEK1-210ENST00000528276 SIGLEC1Q9BZZ2 1709 aa19.53■□□□□ 0.72
CHEK1-210ENST00000528276 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
CHEK1-210ENST00000528276 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
CHEK1-210ENST00000528276 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
CHEK1-210ENST00000528276 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
CHEK1-210ENST00000528276 ERVK-7P63135 1459 aa19.52■□□□□ 0.72
CHEK1-210ENST00000528276 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
CHEK1-210ENST00000528276 CDCA8Q53HL2 280 aa19.51■□□□□ 0.71
CHEK1-210ENST00000528276 TESK2Q96S53 571 aa19.51■□□□□ 0.71
CHEK1-210ENST00000528276 PREX1Q8TCU6 1659 aa19.51■□□□□ 0.71
CHEK1-210ENST00000528276 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
CHEK1-210ENST00000528276 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
CHEK1-210ENST00000528276 C14orf93Q9H972 538 aaKnown RBP19.5■□□□□ 0.71
CHEK1-210ENST00000528276 CLTCQ00610 1675 aaKnown RBP19.5■□□□□ 0.71
CHEK1-210ENST00000528276 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
CHEK1-210ENST00000528276 PRKRIP1Q9H875 184 aaPredicted RBP19.49■□□□□ 0.71
CHEK1-210ENST00000528276 KIAA1210Q9ULL0 1709 aa19.49■□□□□ 0.71
CHEK1-210ENST00000528276 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
CHEK1-210ENST00000528276 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
CHEK1-210ENST00000528276 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
CHEK1-210ENST00000528276 DISP3Q9P2K9 1392 aa19.45■□□□□ 0.7
CHEK1-210ENST00000528276 PPLO60437 1756 aa19.43■□□□□ 0.7
CHEK1-210ENST00000528276 NEXMIFQ5QGS0 1516 aa19.43■□□□□ 0.7
CHEK1-210ENST00000528276 SPATA31D1Q6ZQQ2 1576 aa19.43■□□□□ 0.7
CHEK1-210ENST00000528276 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
CHEK1-210ENST00000528276 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
CHEK1-210ENST00000528276 IQGAP1P46940 1657 aa19.42■□□□□ 0.7
CHEK1-210ENST00000528276 TMEM132EQ6IEE7 984 aa19.41■□□□□ 0.7
CHEK1-210ENST00000528276 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
CHEK1-210ENST00000528276 HDGFP51858 240 aaKnown RBP19.4■□□□□ 0.7
CHEK1-210ENST00000528276 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
CHEK1-210ENST00000528276 CENPJQ9HC77 1338 aaPredicted RBP19.39■□□□□ 0.7
CHEK1-210ENST00000528276 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
CHEK1-210ENST00000528276 TNRQ92752 1358 aa19.38■□□□□ 0.69
CHEK1-210ENST00000528276 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
CHEK1-210ENST00000528276 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHEK1-210ENST00000528276 PANK3Q9H999 370 aa19.37■□□□□ 0.69
CHEK1-210ENST00000528276 RALBP1Q15311 655 aa19.35■□□□□ 0.69
CHEK1-210ENST00000528276 KTN1Q86UP2 1357 aaKnown RBP19.35■□□□□ 0.69
CHEK1-210ENST00000528276 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
CHEK1-210ENST00000528276 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.69
CHEK1-210ENST00000528276 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
CHEK1-210ENST00000528276 ADGRB1O14514 1584 aa19.33■□□□□ 0.68
CHEK1-210ENST00000528276 STK26Q9P289 416 aa19.32■□□□□ 0.68
CHEK1-210ENST00000528276 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
CHEK1-210ENST00000528276 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
CHEK1-210ENST00000528276 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
CHEK1-210ENST00000528276 BCANQ96GW7 911 aa19.3■□□□□ 0.68
CHEK1-210ENST00000528276 PER1O15534 1290 aaPredicted RBP19.3■□□□□ 0.68
CHEK1-210ENST00000528276 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
CHEK1-210ENST00000528276 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
CHEK1-210ENST00000528276 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
CHEK1-210ENST00000528276 MYBBP1AQ9BQG0 1328 aaKnown RBP19.28■□□□□ 0.68
CHEK1-210ENST00000528276 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
CHEK1-210ENST00000528276 POGKQ9P215 609 aa19.28■□□□□ 0.68
CHEK1-210ENST00000528276 EVC2Q86UK5 1308 aa19.27■□□□□ 0.67
CHEK1-210ENST00000528276 MYO5BQ9ULV0 1848 aa19.26■□□□□ 0.67
CHEK1-210ENST00000528276 MYO3AQ8NEV4 1616 aa19.26■□□□□ 0.67
CHEK1-210ENST00000528276 HNRNPUQ00839 825 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHEK1-210ENST00000528276 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
CHEK1-210ENST00000528276 SAFB2Q14151 953 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHEK1-210ENST00000528276 YTHDC2Q9H6S0 1430 aaKnown RBP19.24■□□□□ 0.67
CHEK1-210ENST00000528276 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
CHEK1-210ENST00000528276 ALKQ9UM73 1620 aa19.23■□□□□ 0.67
CHEK1-210ENST00000528276 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
CHEK1-210ENST00000528276 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
CHEK1-210ENST00000528276 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
CHEK1-210ENST00000528276 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
CHEK1-210ENST00000528276 PRAM1Q96QH2 718 aa19.22■□□□□ 0.67
CHEK1-210ENST00000528276 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
CHEK1-210ENST00000528276 BRD4O60885 1362 aaPredicted RBP19.21■□□□□ 0.67
CHEK1-210ENST00000528276 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
CHEK1-210ENST00000528276 PUS7Q96PZ0 661 aaKnown RBP19.2■□□□□ 0.66
CHEK1-210ENST00000528276 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
CHEK1-210ENST00000528276 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
CHEK1-210ENST00000528276 SRPK2P78362 688 aaKnown RBP19.18■□□□□ 0.66
CHEK1-210ENST00000528276 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
CHEK1-210ENST00000528276 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
CHEK1-210ENST00000528276 ASXL1Q8IXJ9 1541 aa19.18■□□□□ 0.66
CHEK1-210ENST00000528276 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
CHEK1-210ENST00000528276 LRPPRCP42704 1394 aaKnown RBP19.16■□□□□ 0.66
CHEK1-210ENST00000528276 C3P01024 1663 aa19.15■□□□□ 0.66
CHEK1-210ENST00000528276 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
CHEK1-210ENST00000528276 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
CHEK1-210ENST00000528276 ARHGEF28Q8N1W1 1705 aaKnown RBP19.15■□□□□ 0.66
CHEK1-210ENST00000528276 PTPRMP28827 1452 aa19.14■□□□□ 0.65
CHEK1-210ENST00000528276 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
CHEK1-210ENST00000528276 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
CHEK1-210ENST00000528276 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
CHEK1-210ENST00000528276 UBR1Q8IWV7 1749 aa19.13■□□□□ 0.65
CHEK1-210ENST00000528276 NPC1L1Q9UHC9 1359 aa19.12■□□□□ 0.65
CHEK1-210ENST00000528276 PLEKHG1Q9ULL1 1385 aa19.12■□□□□ 0.65
CHEK1-210ENST00000528276 LTKP29376 864 aa19.11■□□□□ 0.65
CHEK1-210ENST00000528276 METP08581 1390 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms