RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
CAPN1-212ENST00000527887 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
CAPN1-212ENST00000527887 RIMS2Q9UQ26 1411 aa21.5■■□□□ 1.03
CAPN1-212ENST00000527887 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
CAPN1-212ENST00000527887 TBX22Q9Y458 520 aa21.48■■□□□ 1.03
CAPN1-212ENST00000527887 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
CAPN1-212ENST00000527887 ALKQ9UM73 1620 aa21.47■■□□□ 1.03
CAPN1-212ENST00000527887 E9PCH4 1651 aa21.47■■□□□ 1.03
CAPN1-212ENST00000527887 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-212ENST00000527887 TMEM94Q12767 1356 aa21.45■■□□□ 1.02
CAPN1-212ENST00000527887 NAIPQ13075 1403 aa21.44■■□□□ 1.02
CAPN1-212ENST00000527887 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
CAPN1-212ENST00000527887 PIK3R4Q99570 1358 aa21.41■■□□□ 1.02
CAPN1-212ENST00000527887 ILDR2Q71H61 639 aa21.41■■□□□ 1.02
CAPN1-212ENST00000527887 FAM135BQ49AJ0 1406 aa21.4■■□□□ 1.02
CAPN1-212ENST00000527887 NWD1Q149M9 1564 aa21.4■■□□□ 1.02
CAPN1-212ENST00000527887 HFM1A2PYH4 1435 aa21.39■■□□□ 1.02
CAPN1-212ENST00000527887 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
CAPN1-212ENST00000527887 MSH6P52701 1360 aa21.36■■□□□ 1.01
CAPN1-212ENST00000527887 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
CAPN1-212ENST00000527887 SOCS7O14512 581 aa21.35■■□□□ 1.01
CAPN1-212ENST00000527887 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
CAPN1-212ENST00000527887 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-212ENST00000527887 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
CAPN1-212ENST00000527887 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
CAPN1-212ENST00000527887 XIRP1Q702N8 1843 aaKnown RBP21.33■■□□□ 1.01
CAPN1-212ENST00000527887 MYO5BQ9ULV0 1848 aa21.33■■□□□ 1.01
CAPN1-212ENST00000527887 RBM33Q96EV2 1170 aaKnown RBP21.32■■□□□ 1
CAPN1-212ENST00000527887 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
CAPN1-212ENST00000527887 SLAIN2Q9P270 581 aa21.31■■□□□ 1
CAPN1-212ENST00000527887 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
CAPN1-212ENST00000527887 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
CAPN1-212ENST00000527887 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
CAPN1-212ENST00000527887 TRPM2O94759 1503 aa21.29■■□□□ 1
CAPN1-212ENST00000527887 CHD2O14647 1828 aaKnown RBP21.29■■□□□ 1
CAPN1-212ENST00000527887 MED1Q15648 1581 aaPredicted RBP21.28■■□□□ 1
CAPN1-212ENST00000527887 C19orf44Q9H6X5 657 aa21.28■■□□□ 1
CAPN1-212ENST00000527887 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
CAPN1-212ENST00000527887 CADPS2Q86UW7 1296 aa21.27■■□□□ 1
CAPN1-212ENST00000527887 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
CAPN1-212ENST00000527887 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-212ENST00000527887 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
CAPN1-212ENST00000527887 SETBP1Q9Y6X0 1596 aa21.24■□□□□ 0.99
CAPN1-212ENST00000527887 VGFO15240 615 aaPredicted RBP21.24■□□□□ 0.99
CAPN1-212ENST00000527887 ATF3P18847 181 aa21.23■□□□□ 0.99
CAPN1-212ENST00000527887 CLTCL1P53675 1640 aa21.21■□□□□ 0.99
CAPN1-212ENST00000527887 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
CAPN1-212ENST00000527887 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
CAPN1-212ENST00000527887 ROBO1Q9Y6N7 1651 aa21.18■□□□□ 0.98
CAPN1-212ENST00000527887 METP08581 1390 aa21.17■□□□□ 0.98
CAPN1-212ENST00000527887 DCCP43146 1447 aa21.17■□□□□ 0.98
CAPN1-212ENST00000527887 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
CAPN1-212ENST00000527887 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
CAPN1-212ENST00000527887 KIF1BO60333 1816 aa21.14■□□□□ 0.97
CAPN1-212ENST00000527887 JCADQ9P266 1359 aa21.13■□□□□ 0.97
CAPN1-212ENST00000527887 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
CAPN1-212ENST00000527887 XRN1Q8IZH2 1706 aaKnown RBP21.11■□□□□ 0.97
CAPN1-212ENST00000527887 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-212ENST00000527887 FOXD1Q16676 465 aa21.1■□□□□ 0.97
CAPN1-212ENST00000527887 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
CAPN1-212ENST00000527887 BRINP3Q76B58 766 aa21.08■□□□□ 0.97
CAPN1-212ENST00000527887 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
CAPN1-212ENST00000527887 PRAG1Q86YV5 1406 aa21.06■□□□□ 0.96
CAPN1-212ENST00000527887 ADGRL3Q9HAR2 1447 aa21.06■□□□□ 0.96
CAPN1-212ENST00000527887 RGS17Q9UGC6 210 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-212ENST00000527887 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
CAPN1-212ENST00000527887 SPATA31A6Q5VVP1 1343 aa21.05■□□□□ 0.96
CAPN1-212ENST00000527887 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-212ENST00000527887 PHLPP1O60346 1717 aa21.04■□□□□ 0.96
CAPN1-212ENST00000527887 MST1RQ04912 1400 aa21.04■□□□□ 0.96
CAPN1-212ENST00000527887 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
CAPN1-212ENST00000527887 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
CAPN1-212ENST00000527887 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-212ENST00000527887 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
CAPN1-212ENST00000527887 ROBO2Q9HCK4 1378 aa20.99■□□□□ 0.95
CAPN1-212ENST00000527887 HRCP23327 699 aa20.99■□□□□ 0.95
CAPN1-212ENST00000527887 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
CAPN1-212ENST00000527887 PPLO60437 1756 aa20.98■□□□□ 0.95
CAPN1-212ENST00000527887 ASXL1Q8IXJ9 1541 aa20.98■□□□□ 0.95
CAPN1-212ENST00000527887 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
CAPN1-212ENST00000527887 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
CAPN1-212ENST00000527887 POTEAQ6S8J7 498 aa20.95■□□□□ 0.94
CAPN1-212ENST00000527887 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
CAPN1-212ENST00000527887 ABCC11Q96J66 1382 aa20.94■□□□□ 0.94
CAPN1-212ENST00000527887 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
CAPN1-212ENST00000527887 LRPPRCP42704 1394 aaKnown RBP20.93■□□□□ 0.94
CAPN1-212ENST00000527887 ZNF772Q68DY9 489 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-212ENST00000527887 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
CAPN1-212ENST00000527887 TECPR2O15040 1411 aa20.92■□□□□ 0.94
CAPN1-212ENST00000527887 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
CAPN1-212ENST00000527887 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
CAPN1-212ENST00000527887 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
CAPN1-212ENST00000527887 C14orf93Q9H972 538 aaKnown RBP20.9■□□□□ 0.94
CAPN1-212ENST00000527887 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
CAPN1-212ENST00000527887 STK26Q9P289 416 aa20.88■□□□□ 0.93
CAPN1-212ENST00000527887 SOS2Q07890 1332 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-212ENST00000527887 LRP6O75581 1613 aa20.87■□□□□ 0.93
CAPN1-212ENST00000527887 NHSL1Q5SYE7 1610 aa20.87■□□□□ 0.93
CAPN1-212ENST00000527887 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
CAPN1-212ENST00000527887 ORAI2Q96SN7 254 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms