RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
NXF1-205ENST00000527497 RSBN1LQ6PCB5 846 aaPredicted RBP9.39□□□□□ -0.91
NXF1-205ENST00000527497 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
NXF1-205ENST00000527497 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
NXF1-205ENST00000527497 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
NXF1-205ENST00000527497 GNEQ9Y223 722 aaKnown RBP9.39□□□□□ -0.91
NXF1-205ENST00000527497 GJA5P36382 358 aa9.38□□□□□ -0.91
NXF1-205ENST00000527497 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
NXF1-205ENST00000527497 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
NXF1-205ENST00000527497 SLAIN1Q8ND83 568 aa9.38□□□□□ -0.91
NXF1-205ENST00000527497 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
NXF1-205ENST00000527497 CARNS1A5YM72 827 aa9.37□□□□□ -0.91
NXF1-205ENST00000527497 LILRB3O75022 631 aa9.37□□□□□ -0.91
NXF1-205ENST00000527497 ATG7O95352 703 aa9.37□□□□□ -0.91
NXF1-205ENST00000527497 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
NXF1-205ENST00000527497 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
NXF1-205ENST00000527497 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
NXF1-205ENST00000527497 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
NXF1-205ENST00000527497 TMEM88BA6NKF7 163 aa9.36□□□□□ -0.91
NXF1-205ENST00000527497 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
NXF1-205ENST00000527497 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
NXF1-205ENST00000527497 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
NXF1-205ENST00000527497 IGSF5Q9NSI5 407 aa9.35□□□□□ -0.91
NXF1-205ENST00000527497 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
NXF1-205ENST00000527497 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
NXF1-205ENST00000527497 QPCTQ16769 361 aa9.34□□□□□ -0.91
NXF1-205ENST00000527497 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
NXF1-205ENST00000527497 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
NXF1-205ENST00000527497 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
NXF1-205ENST00000527497 CD46P15529 392 aa9.33□□□□□ -0.92
NXF1-205ENST00000527497 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
NXF1-205ENST00000527497 TTC13Q8NBP0 860 aa9.33□□□□□ -0.92
NXF1-205ENST00000527497 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
NXF1-205ENST00000527497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
NXF1-205ENST00000527497 ERCC3P19447 782 aa9.32□□□□□ -0.92
NXF1-205ENST00000527497 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
NXF1-205ENST00000527497 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
NXF1-205ENST00000527497 ALG2Q9H553 416 aa9.32□□□□□ -0.92
NXF1-205ENST00000527497 MOXD2PA6NHM9 499 aa9.31□□□□□ -0.92
NXF1-205ENST00000527497 NUTM2BA6NNL0 878 aaPredicted RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 NUTM2EB1AL46 878 aaPredicted RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 NUTM2DQ5VT03 806 aaPredicted RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 NUTM2AQ8IVF1 878 aaPredicted RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
NXF1-205ENST00000527497 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
NXF1-205ENST00000527497 SLC34A2O95436 690 aa9.3□□□□□ -0.92
NXF1-205ENST00000527497 SOX11P35716 441 aa9.3□□□□□ -0.92
NXF1-205ENST00000527497 SULF1Q8IWU6 871 aa9.3□□□□□ -0.92
NXF1-205ENST00000527497 VAC14Q08AM6 782 aa9.29□□□□□ -0.92
NXF1-205ENST00000527497 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
NXF1-205ENST00000527497 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
NXF1-205ENST00000527497 IER5LQ5T953 404 aa9.28□□□□□ -0.92
NXF1-205ENST00000527497 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
NXF1-205ENST00000527497 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
NXF1-205ENST00000527497 UCN2Q96RP3 112 aa9.27□□□□□ -0.93
NXF1-205ENST00000527497 GPR37L1O60883 481 aa9.26□□□□□ -0.93
NXF1-205ENST00000527497 NDUFV2P19404 249 aa9.26□□□□□ -0.93
NXF1-205ENST00000527497 ZBTB3Q9H5J0 574 aa9.26□□□□□ -0.93
NXF1-205ENST00000527497 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
NXF1-205ENST00000527497 CDCA8Q53HL2 280 aa9.25□□□□□ -0.93
NXF1-205ENST00000527497 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
NXF1-205ENST00000527497 CABLES1Q8TDN4 633 aa9.25□□□□□ -0.93
NXF1-205ENST00000527497 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
NXF1-205ENST00000527497 TRIM34Q9BYJ4 488 aa9.25□□□□□ -0.93
NXF1-205ENST00000527497 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
NXF1-205ENST00000527497 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
NXF1-205ENST00000527497 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
NXF1-205ENST00000527497 PLCG2P16885 1265 aa9.23□□□□□ -0.93
NXF1-205ENST00000527497 ELOAQ14241 798 aaKnown RBP9.23□□□□□ -0.93
NXF1-205ENST00000527497 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
NXF1-205ENST00000527497 PRR7Q8TB68 274 aa9.23□□□□□ -0.93
NXF1-205ENST00000527497 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
NXF1-205ENST00000527497 PRSS12P56730 875 aa9.22□□□□□ -0.93
NXF1-205ENST00000527497 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
NXF1-205ENST00000527497 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
NXF1-205ENST00000527497 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
NXF1-205ENST00000527497 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
NXF1-205ENST00000527497 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
NXF1-205ENST00000527497 ATP9BO43861 1147 aa9.19□□□□□ -0.94
NXF1-205ENST00000527497 FOSBP53539 338 aa9.19□□□□□ -0.94
NXF1-205ENST00000527497 ATN1P54259 1190 aaPredicted RBP9.19□□□□□ -0.94
NXF1-205ENST00000527497 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
NXF1-205ENST00000527497 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
NXF1-205ENST00000527497 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
NXF1-205ENST00000527497 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
NXF1-205ENST00000527497 USP46P62068 366 aa9.18□□□□□ -0.94
NXF1-205ENST00000527497 POTEHQ6S545 545 aa9.18□□□□□ -0.94
NXF1-205ENST00000527497 TBC1D9Q6ZT07 1266 aa9.18□□□□□ -0.94
NXF1-205ENST00000527497 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
NXF1-205ENST00000527497 EYA1Q99502 592 aa9.18□□□□□ -0.94
NXF1-205ENST00000527497 KDM4AO75164 1064 aa9.17□□□□□ -0.94
NXF1-205ENST00000527497 ZNF16P17020 682 aaPredicted RBP9.17□□□□□ -0.94
NXF1-205ENST00000527497 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
NXF1-205ENST00000527497 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
NXF1-205ENST00000527497 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
NXF1-205ENST00000527497 GALR2O43603 387 aaPredicted RBP9.16□□□□□ -0.94
NXF1-205ENST00000527497 TCF3P15923 654 aa9.16□□□□□ -0.94
NXF1-205ENST00000527497 DNAJB2P25686 324 aa9.16□□□□□ -0.94
NXF1-205ENST00000527497 CANXP27824 592 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms