RNA–Protein interactions for RNA: ENST00000527495.5

CCDC90B-209, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-209ENST00000527495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC90B-209ENST00000527495 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
CCDC90B-209ENST00000527495 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
CCDC90B-209ENST00000527495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.44□□□□□ -1.06
CCDC90B-209ENST00000527495 OATP04181 439 aa8.43□□□□□ -1.06
CCDC90B-209ENST00000527495 KCNC4Q03721 635 aa8.43□□□□□ -1.06
CCDC90B-209ENST00000527495 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
CCDC90B-209ENST00000527495 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
CCDC90B-209ENST00000527495 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
CCDC90B-209ENST00000527495 CFHP08603 1231 aa8.38□□□□□ -1.07
CCDC90B-209ENST00000527495 COPS2P61201 443 aa8.38□□□□□ -1.07
CCDC90B-209ENST00000527495 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
CCDC90B-209ENST00000527495 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
CCDC90B-209ENST00000527495 BLOC1S3Q6QNY0 202 aa8.38□□□□□ -1.07
CCDC90B-209ENST00000527495 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
CCDC90B-209ENST00000527495 IRF6O14896 467 aa8.36□□□□□ -1.07
CCDC90B-209ENST00000527495 DAXXQ9UER7 740 aaPredicted RBP8.36□□□□□ -1.07
CCDC90B-209ENST00000527495 NECTIN2Q92692 538 aa8.35□□□□□ -1.07
CCDC90B-209ENST00000527495 CCDC102AQ96A19 550 aa8.35□□□□□ -1.07
CCDC90B-209ENST00000527495 TLL1O43897 1013 aa8.34□□□□□ -1.07
CCDC90B-209ENST00000527495 ZPR1O75312 459 aa8.34□□□□□ -1.07
CCDC90B-209ENST00000527495 PCDHB3Q9Y5E6 796 aa8.34□□□□□ -1.07
CCDC90B-209ENST00000527495 RGS20O76081 388 aa8.33□□□□□ -1.08
CCDC90B-209ENST00000527495 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
CCDC90B-209ENST00000527495 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-209ENST00000527495 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
CCDC90B-209ENST00000527495 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
CCDC90B-209ENST00000527495 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
CCDC90B-209ENST00000527495 ZMYND10O75800 440 aa8.31□□□□□ -1.08
CCDC90B-209ENST00000527495 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-209ENST00000527495 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
CCDC90B-209ENST00000527495 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-209ENST00000527495 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
CCDC90B-209ENST00000527495 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
CCDC90B-209ENST00000527495 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
CCDC90B-209ENST00000527495 PRR14Q9BWN1 585 aa8.3□□□□□ -1.08
CCDC90B-209ENST00000527495 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-209ENST00000527495 CD46P15529 392 aa8.29□□□□□ -1.08
CCDC90B-209ENST00000527495 GCGRP47871 477 aa8.29□□□□□ -1.08
CCDC90B-209ENST00000527495 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
CCDC90B-209ENST00000527495 FUT2Q10981 343 aa8.28□□□□□ -1.08
CCDC90B-209ENST00000527495 MORN1Q5T089 497 aa8.27□□□□□ -1.09
CCDC90B-209ENST00000527495 SCUBE3Q8IX30 993 aa8.27□□□□□ -1.09
CCDC90B-209ENST00000527495 RDH13Q8NBN7 331 aa8.27□□□□□ -1.09
CCDC90B-209ENST00000527495 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
CCDC90B-209ENST00000527495 THAP11Q96EK4 314 aa8.26□□□□□ -1.09
CCDC90B-209ENST00000527495 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
CCDC90B-209ENST00000527495 PPEF1O14829 653 aaPredicted RBP8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 S1PR4O95977 384 aa8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 HLA-CQ95604 372 aa8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 SLC27A5Q9Y2P5 690 aa8.23□□□□□ -1.09
CCDC90B-209ENST00000527495 ADH1BP00325 375 aa8.22□□□□□ -1.09
CCDC90B-209ENST00000527495 NR1I2O75469 434 aa8.21□□□□□ -1.1
CCDC90B-209ENST00000527495 ATP6V1AP38606 617 aa8.21□□□□□ -1.1
CCDC90B-209ENST00000527495 PLA2G2CQ5R387 149 aa8.21□□□□□ -1.1
CCDC90B-209ENST00000527495 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.1
CCDC90B-209ENST00000527495 AMHR2Q16671 573 aa8.2□□□□□ -1.1
CCDC90B-209ENST00000527495 RSPH4AQ5TD94 716 aa8.2□□□□□ -1.1
CCDC90B-209ENST00000527495 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
CCDC90B-209ENST00000527495 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-209ENST00000527495 LCE2BO14633 110 aa8.19□□□□□ -1.1
CCDC90B-209ENST00000527495 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-209ENST00000527495 CLCN1P35523 988 aa8.18□□□□□ -1.1
CCDC90B-209ENST00000527495 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
CCDC90B-209ENST00000527495 SPSB2Q99619 263 aa8.18□□□□□ -1.1
CCDC90B-209ENST00000527495 PRDM9Q9NQV7 894 aa8.18□□□□□ -1.1
CCDC90B-209ENST00000527495 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-209ENST00000527495 SLC24A1O60721 1099 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 KDM4AO75164 1064 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 ANKLE1Q8NAG6 615 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 SLC6A16Q9GZN6 736 aa8.17□□□□□ -1.1
CCDC90B-209ENST00000527495 TRIM66O15016 1216 aa8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 HOXA2O43364 376 aa8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 PARP9Q8IXQ6 854 aa8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 SALL2Q9Y467 1007 aaPredicted RBP8.16□□□□□ -1.1
CCDC90B-209ENST00000527495 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-209ENST00000527495 GGCXP38435 758 aa8.14□□□□□ -1.11
CCDC90B-209ENST00000527495 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
CCDC90B-209ENST00000527495 MS4A1P11836 297 aa8.13□□□□□ -1.11
CCDC90B-209ENST00000527495 FMNL1O95466 1100 aaPredicted RBP8.12□□□□□ -1.11
CCDC90B-209ENST00000527495 SLC19A1P41440 591 aa8.12□□□□□ -1.11
CCDC90B-209ENST00000527495 SLC24A3Q9HC58 644 aa8.12□□□□□ -1.11
CCDC90B-209ENST00000527495 PCDHGC3Q9UN70 934 aa8.12□□□□□ -1.11
CCDC90B-209ENST00000527495 USP46P62068 366 aa8.11□□□□□ -1.11
CCDC90B-209ENST00000527495 MSS51Q4VC12 460 aa8.11□□□□□ -1.11
CCDC90B-209ENST00000527495 SPRYD7Q5W111 196 aa8.11□□□□□ -1.11
CCDC90B-209ENST00000527495 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
CCDC90B-209ENST00000527495 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-209ENST00000527495 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
CCDC90B-209ENST00000527495 AK7Q96M32 723 aa8.1□□□□□ -1.11
CCDC90B-209ENST00000527495 MMP16P51512 607 aa8.09□□□□□ -1.11
CCDC90B-209ENST00000527495 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-209ENST00000527495 GFRA3O60609 400 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms