RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MYO3AQ8NEV4 1616 aa26.62■■□□□ 1.85
SMPD1-203ENST00000527275 ADGRF5Q8IZF2 1346 aa26.62■■□□□ 1.85
SMPD1-203ENST00000527275 NEXMIFQ5QGS0 1516 aa26.62■■□□□ 1.85
SMPD1-203ENST00000527275 PPLO60437 1756 aa26.62■■□□□ 1.85
SMPD1-203ENST00000527275 UBR1Q8IWV7 1749 aa26.61■■□□□ 1.85
SMPD1-203ENST00000527275 MYOM2P54296 1465 aa26.6■■□□□ 1.85
SMPD1-203ENST00000527275 KDM5AP29375 1690 aaKnown RBP26.59■■□□□ 1.85
SMPD1-203ENST00000527275 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
SMPD1-203ENST00000527275 CEP170BQ9Y4F5 1589 aaPredicted RBP26.55■■□□□ 1.84
SMPD1-203ENST00000527275 RIMS2Q9UQ26 1411 aa26.55■■□□□ 1.84
SMPD1-203ENST00000527275 TMEM2Q9UHN6 1383 aa26.54■■□□□ 1.84
SMPD1-203ENST00000527275 NRXN1Q9ULB1 1477 aa26.54■■□□□ 1.84
SMPD1-203ENST00000527275 ZFYVE9O95405 1425 aa26.53■■□□□ 1.84
SMPD1-203ENST00000527275 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
SMPD1-203ENST00000527275 THEMISQ8N1K5 641 aaPredicted RBP26.53■■□□□ 1.84
SMPD1-203ENST00000527275 NBPF1Q3BBV0 1214 aa26.52■■□□□ 1.84
SMPD1-203ENST00000527275 TRPM1Q7Z4N2 1603 aa26.52■■□□□ 1.84
SMPD1-203ENST00000527275 PIK3C2GO75747 1445 aa26.51■■□□□ 1.83
SMPD1-203ENST00000527275 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
SMPD1-203ENST00000527275 ROCK2O75116 1388 aaKnown RBP26.49■■□□□ 1.83
SMPD1-203ENST00000527275 CFAP70Q5T0N1 1121 aa26.49■■□□□ 1.83
SMPD1-203ENST00000527275 HDGFP51858 240 aaKnown RBP26.48■■□□□ 1.83
SMPD1-203ENST00000527275 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.48■■□□□ 1.83
SMPD1-203ENST00000527275 ZNF142P52746 1687 aaPredicted RBP26.48■■□□□ 1.83
SMPD1-203ENST00000527275 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
SMPD1-203ENST00000527275 LTKP29376 864 aa26.46■■□□□ 1.83
SMPD1-203ENST00000527275 MIER1Q8N108 512 aa26.46■■□□□ 1.83
SMPD1-203ENST00000527275 SLIT1O75093 1534 aa26.45■■□□□ 1.82
SMPD1-203ENST00000527275 ARHGAP23Q9P227 1491 aa26.45■■□□□ 1.82
SMPD1-203ENST00000527275 TXNDC2Q86VQ3 553 aa26.44■■□□□ 1.82
SMPD1-203ENST00000527275 C14orf93Q9H972 538 aaKnown RBP26.44■■□□□ 1.82
SMPD1-203ENST00000527275 EID1Q9Y6B2 187 aa26.43■■□□□ 1.82
SMPD1-203ENST00000527275 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
SMPD1-203ENST00000527275 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
SMPD1-203ENST00000527275 KIAA1210Q9ULL0 1709 aa26.41■■□□□ 1.82
SMPD1-203ENST00000527275 EIF4G2P78344 907 aaKnown RBP eCLIP26.4■■□□□ 1.82
SMPD1-203ENST00000527275 USP47Q96K76 1375 aa26.37■■□□□ 1.81
SMPD1-203ENST00000527275 HSPA5P11021 654 aaKnown RBP26.37■■□□□ 1.81
SMPD1-203ENST00000527275 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
SMPD1-203ENST00000527275 BCANQ96GW7 911 aa26.36■■□□□ 1.81
SMPD1-203ENST00000527275 SCAF11Q99590 1463 aaKnown RBP26.35■■□□□ 1.81
SMPD1-203ENST00000527275 PLEKHG1Q9ULL1 1385 aa26.34■■□□□ 1.81
SMPD1-203ENST00000527275 ALKQ9UM73 1620 aa26.34■■□□□ 1.81
SMPD1-203ENST00000527275 ANKLE2Q86XL3 938 aa26.34■■□□□ 1.81
SMPD1-203ENST00000527275 LAMC1P11047 1609 aa26.33■■□□□ 1.81
SMPD1-203ENST00000527275 NRXN3Q9Y4C0 1643 aa26.33■■□□□ 1.81
SMPD1-203ENST00000527275 ADGRB1O14514 1584 aa26.33■■□□□ 1.81
SMPD1-203ENST00000527275 SETBP1Q9Y6X0 1596 aa26.32■■□□□ 1.8
SMPD1-203ENST00000527275 IQGAP1P46940 1657 aa26.3■■□□□ 1.8
SMPD1-203ENST00000527275 ST20-MTHFSA0A0A6YYL1 179 aa26.29■■□□□ 1.8
SMPD1-203ENST00000527275 HSPA2P54652 639 aa26.28■■□□□ 1.8
SMPD1-203ENST00000527275 SLC26A8Q96RN1 970 aa26.28■■□□□ 1.8
SMPD1-203ENST00000527275 ASXL1Q8IXJ9 1541 aa26.28■■□□□ 1.8
SMPD1-203ENST00000527275 LMTK3Q96Q04 1460 aa26.28■■□□□ 1.8
SMPD1-203ENST00000527275 ADAMTS13Q76LX8 1427 aa26.28■■□□□ 1.8
SMPD1-203ENST00000527275 SETD1AO15047 1707 aaKnown RBP26.27■■□□□ 1.8
SMPD1-203ENST00000527275 TRAK1Q9UPV9 953 aa26.26■■□□□ 1.79
SMPD1-203ENST00000527275 METP08581 1390 aa26.25■■□□□ 1.79
SMPD1-203ENST00000527275 DDX10Q13206 875 aaKnown RBP26.24■■□□□ 1.79
SMPD1-203ENST00000527275 NCKAP5LQ9HCH0 1330 aa26.24■■□□□ 1.79
SMPD1-203ENST00000527275 STK26Q9P289 416 aa26.23■■□□□ 1.79
SMPD1-203ENST00000527275 MED14O60244 1454 aa26.22■■□□□ 1.79
SMPD1-203ENST00000527275 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
SMPD1-203ENST00000527275 TBX22Q9Y458 520 aa26.2■■□□□ 1.79
SMPD1-203ENST00000527275 EIF3AQ14152 1382 aaKnown RBP26.19■■□□□ 1.78
SMPD1-203ENST00000527275 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
SMPD1-203ENST00000527275 NPHP4O75161 1426 aaPredicted RBP26.17■■□□□ 1.78
SMPD1-203ENST00000527275 TESK2Q96S53 571 aa26.16■■□□□ 1.78
SMPD1-203ENST00000527275 C11orf95C9JLR9 678 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-203ENST00000527275 LRPPRCP42704 1394 aaKnown RBP26.15■■□□□ 1.78
SMPD1-203ENST00000527275 DIP2AQ14689 1571 aa26.14■■□□□ 1.77
SMPD1-203ENST00000527275 ABCC11Q96J66 1382 aa26.13■■□□□ 1.77
SMPD1-203ENST00000527275 CENPJQ9HC77 1338 aaPredicted RBP26.12■■□□□ 1.77
SMPD1-203ENST00000527275 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
SMPD1-203ENST00000527275 PTPRUQ92729 1446 aa26.1■■□□□ 1.77
SMPD1-203ENST00000527275 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
SMPD1-203ENST00000527275 PRAM1Q96QH2 718 aa26.1■■□□□ 1.77
SMPD1-203ENST00000527275 SAFB2Q14151 953 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMPD1-203ENST00000527275 AMOTL2Q9Y2J4 779 aa26.08■■□□□ 1.77
SMPD1-203ENST00000527275 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
SMPD1-203ENST00000527275 POGKQ9P215 609 aa26.07■■□□□ 1.76
SMPD1-203ENST00000527275 TECPR2O15040 1411 aa26.07■■□□□ 1.76
SMPD1-203ENST00000527275 PIK3R4Q99570 1358 aa26.06■■□□□ 1.76
SMPD1-203ENST00000527275 KIF7Q2M1P5 1343 aa26.06■■□□□ 1.76
SMPD1-203ENST00000527275 STRCQ7RTU9 1775 aa26.06■■□□□ 1.76
SMPD1-203ENST00000527275 DLC1Q96QB1 1528 aa26.06■■□□□ 1.76
SMPD1-203ENST00000527275 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
SMPD1-203ENST00000527275 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
SMPD1-203ENST00000527275 DISP3Q9P2K9 1392 aa26.05■■□□□ 1.76
SMPD1-203ENST00000527275 TMF1P82094 1093 aa26.05■■□□□ 1.76
SMPD1-203ENST00000527275 CCDC7Q96M83 1385 aa26.04■■□□□ 1.76
SMPD1-203ENST00000527275 QRICH2Q9H0J4 1663 aa26.04■■□□□ 1.76
SMPD1-203ENST00000527275 ROBO2Q9HCK4 1378 aa26.04■■□□□ 1.76
SMPD1-203ENST00000527275 PLEKHH1Q9ULM0 1364 aa26.04■■□□□ 1.76
SMPD1-203ENST00000527275 SBNO2Q9Y2G9 1366 aa26.04■■□□□ 1.76
SMPD1-203ENST00000527275 KNDC1Q76NI1 1749 aa26.03■■□□□ 1.76
SMPD1-203ENST00000527275 POLR3GLQ9BT43 218 aa26.02■■□□□ 1.76
SMPD1-203ENST00000527275 KCNA6P17658 529 aa26.02■■□□□ 1.76
SMPD1-203ENST00000527275 SIRT1Q96EB6 747 aa26.02■■□□□ 1.76
SMPD1-203ENST00000527275 CPS1P31327 1500 aa26.01■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms