RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.16
SNRNP35-204ENST00000527158 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
SNRNP35-204ENST00000527158 TESK2Q96S53 571 aa22.32■■□□□ 1.16
SNRNP35-204ENST00000527158 PIK3C2BO00750 1634 aa22.32■■□□□ 1.16
SNRNP35-204ENST00000527158 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
SNRNP35-204ENST00000527158 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
SNRNP35-204ENST00000527158 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
SNRNP35-204ENST00000527158 TMF1P82094 1093 aa22.3■■□□□ 1.16
SNRNP35-204ENST00000527158 IDI1Q13907 227 aa22.3■■□□□ 1.16
SNRNP35-204ENST00000527158 CFAP70Q5T0N1 1121 aa22.3■■□□□ 1.16
SNRNP35-204ENST00000527158 MLECQ14165 292 aa22.28■■□□□ 1.16
SNRNP35-204ENST00000527158 EIF3AQ14152 1382 aaKnown RBP22.28■■□□□ 1.16
SNRNP35-204ENST00000527158 PREX1Q8TCU6 1659 aa22.28■■□□□ 1.16
SNRNP35-204ENST00000527158 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
SNRNP35-204ENST00000527158 MYT1Q01538 1121 aa22.26■■□□□ 1.15
SNRNP35-204ENST00000527158 ESF1Q9H501 851 aaKnown RBP22.26■■□□□ 1.15
SNRNP35-204ENST00000527158 PPLO60437 1756 aa22.25■■□□□ 1.15
SNRNP35-204ENST00000527158 VGFO15240 615 aaPredicted RBP22.25■■□□□ 1.15
SNRNP35-204ENST00000527158 FBXO31Q5XUX0 539 aaPredicted RBP22.25■■□□□ 1.15
SNRNP35-204ENST00000527158 TRHP20396 242 aaPredicted RBP22.24■■□□□ 1.15
SNRNP35-204ENST00000527158 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
SNRNP35-204ENST00000527158 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
SNRNP35-204ENST00000527158 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
SNRNP35-204ENST00000527158 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
SNRNP35-204ENST00000527158 SLC24A1O60721 1099 aa22.22■■□□□ 1.15
SNRNP35-204ENST00000527158 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
SNRNP35-204ENST00000527158 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
SNRNP35-204ENST00000527158 SETBP1Q9Y6X0 1596 aa22.19■■□□□ 1.14
SNRNP35-204ENST00000527158 NEXMIFQ5QGS0 1516 aa22.19■■□□□ 1.14
SNRNP35-204ENST00000527158 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
SNRNP35-204ENST00000527158 TMEM131LA2VDJ0 1609 aa22.16■■□□□ 1.14
SNRNP35-204ENST00000527158 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
SNRNP35-204ENST00000527158 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
SNRNP35-204ENST00000527158 SPATA31D1Q6ZQQ2 1576 aa22.15■■□□□ 1.14
SNRNP35-204ENST00000527158 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
SNRNP35-204ENST00000527158 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
SNRNP35-204ENST00000527158 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
SNRNP35-204ENST00000527158 KTN1Q86UP2 1357 aaKnown RBP22.13■■□□□ 1.13
SNRNP35-204ENST00000527158 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
SNRNP35-204ENST00000527158 RALBP1Q15311 655 aa22.1■■□□□ 1.13
SNRNP35-204ENST00000527158 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
SNRNP35-204ENST00000527158 PANK3Q9H999 370 aa22.1■■□□□ 1.13
SNRNP35-204ENST00000527158 TRAK1Q9UPV9 953 aa22.1■■□□□ 1.13
SNRNP35-204ENST00000527158 ADGRB1O14514 1584 aa22.1■■□□□ 1.13
SNRNP35-204ENST00000527158 CENPJQ9HC77 1338 aaPredicted RBP22.09■■□□□ 1.13
SNRNP35-204ENST00000527158 PER1O15534 1290 aaPredicted RBP22.09■■□□□ 1.13
SNRNP35-204ENST00000527158 MYO5BQ9ULV0 1848 aa22.09■■□□□ 1.13
SNRNP35-204ENST00000527158 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
SNRNP35-204ENST00000527158 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
SNRNP35-204ENST00000527158 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
SNRNP35-204ENST00000527158 A2ML1A8K2U0 1454 aa22.05■■□□□ 1.12
SNRNP35-204ENST00000527158 DNAJC5Q9H3Z4 198 aa22.04■■□□□ 1.12
SNRNP35-204ENST00000527158 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
SNRNP35-204ENST00000527158 MYBBP1AQ9BQG0 1328 aaKnown RBP22.03■■□□□ 1.12
SNRNP35-204ENST00000527158 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
SNRNP35-204ENST00000527158 KDM5AP29375 1690 aaKnown RBP22.02■■□□□ 1.12
SNRNP35-204ENST00000527158 TNRQ92752 1358 aa22.01■■□□□ 1.11
SNRNP35-204ENST00000527158 TMC1Q8TDI8 760 aa22■■□□□ 1.11
SNRNP35-204ENST00000527158 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
SNRNP35-204ENST00000527158 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
SNRNP35-204ENST00000527158 RIMS2Q9UQ26 1411 aa21.99■■□□□ 1.11
SNRNP35-204ENST00000527158 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.98■■□□□ 1.11
SNRNP35-204ENST00000527158 HDGFP51858 240 aaKnown RBP21.98■■□□□ 1.11
SNRNP35-204ENST00000527158 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
SNRNP35-204ENST00000527158 BRD4O60885 1362 aaPredicted RBP21.97■■□□□ 1.11
SNRNP35-204ENST00000527158 CC2D1BQ5T0F9 858 aaKnown RBP21.97■■□□□ 1.11
SNRNP35-204ENST00000527158 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
SNRNP35-204ENST00000527158 STK26Q9P289 416 aa21.95■■□□□ 1.1
SNRNP35-204ENST00000527158 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
SNRNP35-204ENST00000527158 ALKQ9UM73 1620 aa21.94■■□□□ 1.1
SNRNP35-204ENST00000527158 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
SNRNP35-204ENST00000527158 MYOM1P52179 1685 aa21.93■■□□□ 1.1
SNRNP35-204ENST00000527158 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
SNRNP35-204ENST00000527158 ARHGEF28Q8N1W1 1705 aaKnown RBP21.92■■□□□ 1.1
SNRNP35-204ENST00000527158 YTHDC2Q9H6S0 1430 aaKnown RBP21.92■■□□□ 1.1
SNRNP35-204ENST00000527158 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
SNRNP35-204ENST00000527158 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
SNRNP35-204ENST00000527158 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.1
SNRNP35-204ENST00000527158 NLRP1Q9C000 1473 aa21.89■■□□□ 1.09
SNRNP35-204ENST00000527158 AMER1Q5JTC6 1135 aaPredicted RBP21.89■■□□□ 1.09
SNRNP35-204ENST00000527158 POGKQ9P215 609 aa21.88■■□□□ 1.09
SNRNP35-204ENST00000527158 NPC1L1Q9UHC9 1359 aa21.87■■□□□ 1.09
SNRNP35-204ENST00000527158 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
SNRNP35-204ENST00000527158 SAFB2Q14151 953 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNRNP35-204ENST00000527158 PRAM1Q96QH2 718 aa21.87■■□□□ 1.09
SNRNP35-204ENST00000527158 PTPRMP28827 1452 aa21.86■■□□□ 1.09
SNRNP35-204ENST00000527158 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
SNRNP35-204ENST00000527158 UBR1Q8IWV7 1749 aa21.84■■□□□ 1.09
SNRNP35-204ENST00000527158 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
SNRNP35-204ENST00000527158 C3P01024 1663 aa21.83■■□□□ 1.09
SNRNP35-204ENST00000527158 BCANQ96GW7 911 aa21.83■■□□□ 1.09
SNRNP35-204ENST00000527158 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.09
SNRNP35-204ENST00000527158 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
SNRNP35-204ENST00000527158 CARD14Q9BXL6 1004 aa21.82■■□□□ 1.08
SNRNP35-204ENST00000527158 TULP4Q9NRJ4 1543 aa21.82■■□□□ 1.08
SNRNP35-204ENST00000527158 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
SNRNP35-204ENST00000527158 CABP2Q9NPB3 220 aa21.8■■□□□ 1.08
SNRNP35-204ENST00000527158 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
SNRNP35-204ENST00000527158 MINK1Q8N4C8 1332 aaPredicted RBP21.8■■□□□ 1.08
SNRNP35-204ENST00000527158 SRPK2P78362 688 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms