RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 IL27Q8NEV9 243 aa24.23■■□□□ 1.47
PDZD3-206ENST00000527028 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
PDZD3-206ENST00000527028 CDCA8Q53HL2 280 aa24.22■■□□□ 1.47
PDZD3-206ENST00000527028 ASXL1Q8IXJ9 1541 aa24.22■■□□□ 1.47
PDZD3-206ENST00000527028 PRKCSHP14314 528 aaPredicted RBP24.22■■□□□ 1.47
PDZD3-206ENST00000527028 ABCC2Q92887 1545 aa24.21■■□□□ 1.47
PDZD3-206ENST00000527028 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
PDZD3-206ENST00000527028 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
PDZD3-206ENST00000527028 SKAP1Q86WV1 359 aa24.2■■□□□ 1.46
PDZD3-206ENST00000527028 STAC3Q96MF2 364 aa24.2■■□□□ 1.46
PDZD3-206ENST00000527028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.46
PDZD3-206ENST00000527028 C8orf34Q49A92 452 aa24.2■■□□□ 1.46
PDZD3-206ENST00000527028 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
PDZD3-206ENST00000527028 GSE1Q14687 1217 aa24.19■■□□□ 1.46
PDZD3-206ENST00000527028 NFKBIBQ15653 356 aa24.19■■□□□ 1.46
PDZD3-206ENST00000527028 MYOM1P52179 1685 aa24.18■■□□□ 1.46
PDZD3-206ENST00000527028 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
PDZD3-206ENST00000527028 VIRMAQ69YN4 1812 aaKnown RBP24.18■■□□□ 1.46
PDZD3-206ENST00000527028 SCAF11Q99590 1463 aaKnown RBP24.17■■□□□ 1.46
PDZD3-206ENST00000527028 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
PDZD3-206ENST00000527028 SLFN5Q08AF3 891 aa24.17■■□□□ 1.46
PDZD3-206ENST00000527028 CEP152O94986 1710 aa24.17■■□□□ 1.46
PDZD3-206ENST00000527028 TRPM2O94759 1503 aa24.15■■□□□ 1.46
PDZD3-206ENST00000527028 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.45
PDZD3-206ENST00000527028 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
PDZD3-206ENST00000527028 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
PDZD3-206ENST00000527028 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
PDZD3-206ENST00000527028 NEURL4Q96JN8 1562 aa24.08■■□□□ 1.45
PDZD3-206ENST00000527028 SHROOM2Q13796 1616 aa24.08■■□□□ 1.44
PDZD3-206ENST00000527028 NINLQ9Y2I6 1382 aa24.08■■□□□ 1.44
PDZD3-206ENST00000527028 PTPRTO14522 1441 aa24.07■■□□□ 1.44
PDZD3-206ENST00000527028 ABCC1P33527 1531 aa24.06■■□□□ 1.44
PDZD3-206ENST00000527028 SLC24A1O60721 1099 aa24.05■■□□□ 1.44
PDZD3-206ENST00000527028 E9PSI1 815 aa24.05■■□□□ 1.44
PDZD3-206ENST00000527028 PLCH2O75038 1416 aa24.04■■□□□ 1.44
PDZD3-206ENST00000527028 SLC4A3P48751 1232 aa24.04■■□□□ 1.44
PDZD3-206ENST00000527028 DEPDC5O75140 1603 aa24.03■■□□□ 1.44
PDZD3-206ENST00000527028 CLTCL1P53675 1640 aa24.03■■□□□ 1.44
PDZD3-206ENST00000527028 ANO8Q9HCE9 1232 aaPredicted RBP24.02■■□□□ 1.44
PDZD3-206ENST00000527028 FRAT1Q92837 279 aaPredicted RBP24.01■■□□□ 1.43
PDZD3-206ENST00000527028 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
PDZD3-206ENST00000527028 TET3O43151 1660 aa24.01■■□□□ 1.43
PDZD3-206ENST00000527028 PDE3AQ14432 1141 aa24■■□□□ 1.43
PDZD3-206ENST00000527028 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
PDZD3-206ENST00000527028 RGS3P49796 1198 aa23.99■■□□□ 1.43
PDZD3-206ENST00000527028 RTN4Q9NQC3 1192 aaKnown RBP23.99■■□□□ 1.43
PDZD3-206ENST00000527028 CHD1O14646 1710 aa23.98■■□□□ 1.43
PDZD3-206ENST00000527028 APAF1O14727 1248 aa23.98■■□□□ 1.43
PDZD3-206ENST00000527028 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
PDZD3-206ENST00000527028 SPINK5Q9NQ38 1064 aaPredicted RBP23.97■■□□□ 1.43
PDZD3-206ENST00000527028 BRPF3Q9ULD4 1205 aa23.97■■□□□ 1.43
PDZD3-206ENST00000527028 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
PDZD3-206ENST00000527028 CCDC146Q8IYE0 955 aa23.95■■□□□ 1.43
PDZD3-206ENST00000527028 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
PDZD3-206ENST00000527028 MYOM2P54296 1465 aa23.94■■□□□ 1.42
PDZD3-206ENST00000527028 BCAR3O75815 825 aa23.94■■□□□ 1.42
PDZD3-206ENST00000527028 ZFYVE16Q7Z3T8 1539 aa23.94■■□□□ 1.42
PDZD3-206ENST00000527028 ARAP3Q8WWN8 1544 aa23.94■■□□□ 1.42
PDZD3-206ENST00000527028 AAMPQ13685 434 aa23.93■■□□□ 1.42
PDZD3-206ENST00000527028 VWDEQ8N2E2 1590 aa23.93■■□□□ 1.42
PDZD3-206ENST00000527028 ERVK-7P63135 1459 aa23.93■■□□□ 1.42
PDZD3-206ENST00000527028 TRAPPC8Q9Y2L5 1435 aa23.93■■□□□ 1.42
PDZD3-206ENST00000527028 FRAT2O75474 233 aaPredicted RBP23.92■■□□□ 1.42
PDZD3-206ENST00000527028 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
PDZD3-206ENST00000527028 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
PDZD3-206ENST00000527028 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
PDZD3-206ENST00000527028 USP19O94966 1318 aa23.92■■□□□ 1.42
PDZD3-206ENST00000527028 CLUAP1Q96AJ1 413 aa23.9■■□□□ 1.42
PDZD3-206ENST00000527028 IGHDP01880 384 aa23.9■■□□□ 1.42
PDZD3-206ENST00000527028 CENPJQ9HC77 1338 aaPredicted RBP23.89■■□□□ 1.42
PDZD3-206ENST00000527028 ZCCHC11Q5TAX3 1644 aaKnown RBP23.89■■□□□ 1.42
PDZD3-206ENST00000527028 ABCA6Q8N139 1617 aa23.89■■□□□ 1.42
PDZD3-206ENST00000527028 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
PDZD3-206ENST00000527028 BECN1Q14457 450 aa23.87■■□□□ 1.41
PDZD3-206ENST00000527028 NLRP1Q9C000 1473 aa23.87■■□□□ 1.41
PDZD3-206ENST00000527028 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
PDZD3-206ENST00000527028 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
PDZD3-206ENST00000527028 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
PDZD3-206ENST00000527028 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
PDZD3-206ENST00000527028 KANK1Q14678 1352 aa23.84■■□□□ 1.41
PDZD3-206ENST00000527028 WWC1Q8IX03 1113 aa23.84■■□□□ 1.41
PDZD3-206ENST00000527028 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
PDZD3-206ENST00000527028 KIF1BO60333 1816 aa23.83■■□□□ 1.41
PDZD3-206ENST00000527028 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
PDZD3-206ENST00000527028 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
PDZD3-206ENST00000527028 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
PDZD3-206ENST00000527028 IQSEC2Q5JU85 1478 aa23.81■■□□□ 1.4
PDZD3-206ENST00000527028 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
PDZD3-206ENST00000527028 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
PDZD3-206ENST00000527028 CANXP27824 592 aaKnown RBP23.8■■□□□ 1.4
PDZD3-206ENST00000527028 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
PDZD3-206ENST00000527028 USP32Q8NFA0 1604 aa23.78■■□□□ 1.4
PDZD3-206ENST00000527028 FAM43AQ8N2R8 423 aa23.78■■□□□ 1.4
PDZD3-206ENST00000527028 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
PDZD3-206ENST00000527028 ATP7AQ04656 1500 aa23.78■■□□□ 1.4
PDZD3-206ENST00000527028 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
PDZD3-206ENST00000527028 PANK1Q8TE04 598 aa23.77■■□□□ 1.4
PDZD3-206ENST00000527028 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
PDZD3-206ENST00000527028 SEC24BO95487 1268 aa23.76■■□□□ 1.39
PDZD3-206ENST00000527028 RARSP54136 660 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms