RNA–Protein interactions for RNA: ENST00000526943.1

CKAP5-207, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 4

Gene CKAP5, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-207ENST00000526943 CDHR5Q9HBB8 845 aa6□□□□□ -1.45
CKAP5-207ENST00000526943 ATP1B4Q9UN42 357 aaPredicted RBP6□□□□□ -1.45
CKAP5-207ENST00000526943 TTLL13PA6NNM8 815 aa5.99□□□□□ -1.45
CKAP5-207ENST00000526943 POM121CA8CG34 1229 aa5.99□□□□□ -1.45
CKAP5-207ENST00000526943 EN1Q05925 392 aaPredicted RBP5.99□□□□□ -1.45
CKAP5-207ENST00000526943 TUSC1Q2TAM9 212 aa5.99□□□□□ -1.45
CKAP5-207ENST00000526943 METTL3Q86U44 580 aaKnown RBP5.99□□□□□ -1.45
CKAP5-207ENST00000526943 MS4A3Q96HJ5 214 aa5.99□□□□□ -1.45
CKAP5-207ENST00000526943 EVI5O60447 810 aa5.98□□□□□ -1.45
CKAP5-207ENST00000526943 SRPK2P78362 688 aaKnown RBP5.98□□□□□ -1.45
CKAP5-207ENST00000526943 CCDC27Q2M243 656 aa5.98□□□□□ -1.45
CKAP5-207ENST00000526943 SND1Q7KZF4 910 aaKnown RBP eCLIP5.98□□□□□ -1.45
CKAP5-207ENST00000526943 TBC1D2Q9BYX2 928 aa5.98□□□□□ -1.45
CKAP5-207ENST00000526943 PRM3Q9NNZ6 103 aa5.98□□□□□ -1.45
CKAP5-207ENST00000526943 ABL2P42684 1182 aa5.97□□□□□ -1.45
CKAP5-207ENST00000526943 PDCD7Q8N8D1 485 aaKnown RBP5.97□□□□□ -1.45
CKAP5-207ENST00000526943 EPAS1Q99814 870 aa5.97□□□□□ -1.45
CKAP5-207ENST00000526943 LIMD1Q9UGP4 676 aa5.97□□□□□ -1.45
CKAP5-207ENST00000526943 OATP04181 439 aa5.96□□□□□ -1.46
CKAP5-207ENST00000526943 CSB-PGBD3P0DP91 1061 aa5.96□□□□□ -1.46
CKAP5-207ENST00000526943 CFAP70Q5T0N1 1121 aa5.96□□□□□ -1.46
CKAP5-207ENST00000526943 ANO8Q9HCE9 1232 aaPredicted RBP5.96□□□□□ -1.46
CKAP5-207ENST00000526943 TBC1D2BQ9UPU7 963 aa5.96□□□□□ -1.46
CKAP5-207ENST00000526943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.95□□□□□ -1.46
CKAP5-207ENST00000526943 HMGB1P09429 215 aaKnown RBP5.95□□□□□ -1.46
CKAP5-207ENST00000526943 PXYLP1Q8TE99 480 aa5.95□□□□□ -1.46
CKAP5-207ENST00000526943 IVNS1ABPQ9Y6Y0 642 aa5.95□□□□□ -1.46
CKAP5-207ENST00000526943 PHF14O94880 888 aa5.94□□□□□ -1.46
CKAP5-207ENST00000526943 ADAMTS19Q8TE59 1207 aa5.94□□□□□ -1.46
CKAP5-207ENST00000526943 TRIM35Q9UPQ4 493 aa5.94□□□□□ -1.46
CKAP5-207ENST00000526943 BOLA1Q9Y3E2 137 aa5.94□□□□□ -1.46
CKAP5-207ENST00000526943 SPTLC1O15269 473 aa5.93□□□□□ -1.46
CKAP5-207ENST00000526943 MAP3K7O43318 606 aa5.93□□□□□ -1.46
CKAP5-207ENST00000526943 RIC3Q7Z5B4 369 aa5.93□□□□□ -1.46
CKAP5-207ENST00000526943 BMP2KQ9NSY1 1161 aaPredicted RBP5.93□□□□□ -1.46
CKAP5-207ENST00000526943 HSP90B1P14625 803 aaKnown RBP5.92□□□□□ -1.46
CKAP5-207ENST00000526943 PTCD2Q8WV60 388 aaKnown RBP5.92□□□□□ -1.46
CKAP5-207ENST00000526943 NLRP7Q8WX94 980 aa5.92□□□□□ -1.46
CKAP5-207ENST00000526943 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
CKAP5-207ENST00000526943 COLQQ9Y215 455 aaPredicted RBP5.92□□□□□ -1.46
CKAP5-207ENST00000526943 ADGRG1Q9Y653 693 aa5.92□□□□□ -1.46
CKAP5-207ENST00000526943 GJA5P36382 358 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 WASHC4Q2M389 1173 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 FAM161AQ3B820 660 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 HDGFL1Q5TGJ6 251 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 SPIRE2Q8WWL2 714 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 PUS7Q96PZ0 661 aaKnown RBP5.91□□□□□ -1.46
CKAP5-207ENST00000526943 PPP1R12CQ9BZL4 782 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 RBM27Q9P2N5 1060 aaKnown RBP5.91□□□□□ -1.46
CKAP5-207ENST00000526943 GNEQ9Y223 722 aaKnown RBP5.91□□□□□ -1.46
CKAP5-207ENST00000526943 RB1CC1Q8TDY2 1594 aa5.91□□□□□ -1.46
CKAP5-207ENST00000526943 TMEM88BA6NKF7 163 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 USP17L8P0C7I0 530 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 RFX1P22670 979 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 IRX5P78411 483 aaPredicted RBP5.9□□□□□ -1.46
CKAP5-207ENST00000526943 TSR1Q2NL82 804 aaKnown RBP5.9□□□□□ -1.46
CKAP5-207ENST00000526943 RSBN1LQ6PCB5 846 aaPredicted RBP5.9□□□□□ -1.46
CKAP5-207ENST00000526943 TMEM92Q6UXU6 159 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 GJD4Q96KN9 370 aaPredicted RBP5.9□□□□□ -1.46
CKAP5-207ENST00000526943 VRTNQ9H8Y1 702 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 NDUFB9Q9Y6M9 179 aa5.9□□□□□ -1.46
CKAP5-207ENST00000526943 RBM47A0AV96 593 aaKnown RBP5.89□□□□□ -1.47
CKAP5-207ENST00000526943 UNCXA6NJT0 531 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 G3V3G9 751 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 LILRB3O75022 631 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 ATG7O95352 703 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 RSPH4AQ5TD94 716 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 ZNF710Q8N1W2 664 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 TTC13Q8NBP0 860 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 CERKQ8TCT0 537 aa5.89□□□□□ -1.47
CKAP5-207ENST00000526943 CARNS1A5YM72 827 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 GPR37L1O60883 481 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 QPCTQ16769 361 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 TYW1BQ6NUM6 668 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 PADI6Q6TGC4 694 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 USP35Q9P2H5 1018 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 PCDHGA10Q9Y5H3 936 aa5.88□□□□□ -1.47
CKAP5-207ENST00000526943 PALM3A6NDB9 673 aaPredicted RBP5.87□□□□□ -1.47
CKAP5-207ENST00000526943 AP1G2O75843 785 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 SLC34A2O95436 690 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 CD46P15529 392 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 RBM33Q96EV2 1170 aaKnown RBP5.87□□□□□ -1.47
CKAP5-207ENST00000526943 ALG2Q9H553 416 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 OCEL1Q9H607 264 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 BICRAQ9NZM4 1560 aa5.87□□□□□ -1.47
CKAP5-207ENST00000526943 IER5LQ5T953 404 aa5.86□□□□□ -1.47
CKAP5-207ENST00000526943 B4GALNT3Q6L9W6 998 aa5.86□□□□□ -1.47
CKAP5-207ENST00000526943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.85□□□□□ -1.47
CKAP5-207ENST00000526943 MOXD2PA6NHM9 499 aa5.85□□□□□ -1.47
CKAP5-207ENST00000526943 CDK11BP21127 795 aaKnown RBP5.85□□□□□ -1.47
CKAP5-207ENST00000526943 RTL5Q5HYW3 569 aaPredicted RBP5.85□□□□□ -1.47
CKAP5-207ENST00000526943 PRPF38BQ5VTL8 546 aaKnown RBP5.85□□□□□ -1.47
CKAP5-207ENST00000526943 Q6ZNB5 142 aa5.85□□□□□ -1.47
CKAP5-207ENST00000526943 UCN2Q96RP3 112 aa5.85□□□□□ -1.47
CKAP5-207ENST00000526943 CDK11AQ9UQ88 783 aaPredicted RBP5.85□□□□□ -1.47
CKAP5-207ENST00000526943 ERCC3P19447 782 aa5.84□□□□□ -1.47
CKAP5-207ENST00000526943 LMOD1P29536 600 aaPredicted RBP5.84□□□□□ -1.47
CKAP5-207ENST00000526943 CSPP1Q1MSJ5 1256 aa5.84□□□□□ -1.47
CKAP5-207ENST00000526943 RBM46Q8TBY0 533 aaKnown RBP5.84□□□□□ -1.47
CKAP5-207ENST00000526943 JPH4Q96JJ6 628 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms