RNA–Protein interactions for RNA: ENST00000526567.5

ATM-209, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene ATM, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-209ENST00000526567 PRAG1Q86YV5 1406 aa12.82□□□□□ -0.36
ATM-209ENST00000526567 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
ATM-209ENST00000526567 TNRQ92752 1358 aa12.81□□□□□ -0.36
ATM-209ENST00000526567 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
ATM-209ENST00000526567 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
ATM-209ENST00000526567 MYOM2P54296 1465 aa12.8□□□□□ -0.36
ATM-209ENST00000526567 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
ATM-209ENST00000526567 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
ATM-209ENST00000526567 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
ATM-209ENST00000526567 CHGAP10645 457 aaKnown RBP12.8□□□□□ -0.36
ATM-209ENST00000526567 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
ATM-209ENST00000526567 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
ATM-209ENST00000526567 PPLO60437 1756 aa12.79□□□□□ -0.36
ATM-209ENST00000526567 TRPM1Q7Z4N2 1603 aa12.79□□□□□ -0.36
ATM-209ENST00000526567 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
ATM-209ENST00000526567 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
ATM-209ENST00000526567 MYO3AQ8NEV4 1616 aa12.77□□□□□ -0.36
ATM-209ENST00000526567 UBR1Q8IWV7 1749 aa12.75□□□□□ -0.37
ATM-209ENST00000526567 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
ATM-209ENST00000526567 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
ATM-209ENST00000526567 PTPRMP28827 1452 aa12.74□□□□□ -0.37
ATM-209ENST00000526567 PIK3C2GO75747 1445 aa12.73□□□□□ -0.37
ATM-209ENST00000526567 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
ATM-209ENST00000526567 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
ATM-209ENST00000526567 ZFYVE9O95405 1425 aa12.72□□□□□ -0.37
ATM-209ENST00000526567 GPRASP1Q5JY77 1395 aa12.72□□□□□ -0.37
ATM-209ENST00000526567 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
ATM-209ENST00000526567 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
ATM-209ENST00000526567 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
ATM-209ENST00000526567 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
ATM-209ENST00000526567 LAMC1P11047 1609 aa12.71□□□□□ -0.37
ATM-209ENST00000526567 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.37
ATM-209ENST00000526567 STAG3Q9UJ98 1225 aa12.71□□□□□ -0.37
ATM-209ENST00000526567 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
ATM-209ENST00000526567 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.38
ATM-209ENST00000526567 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
ATM-209ENST00000526567 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
ATM-209ENST00000526567 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
ATM-209ENST00000526567 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
ATM-209ENST00000526567 USP47Q96K76 1375 aa12.69□□□□□ -0.38
ATM-209ENST00000526567 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
ATM-209ENST00000526567 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
ATM-209ENST00000526567 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
ATM-209ENST00000526567 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
ATM-209ENST00000526567 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
ATM-209ENST00000526567 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
ATM-209ENST00000526567 ARHGAP23Q9P227 1491 aa12.67□□□□□ -0.38
ATM-209ENST00000526567 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
ATM-209ENST00000526567 SLIT1O75093 1534 aa12.67□□□□□ -0.38
ATM-209ENST00000526567 NRXN3Q9Y4C0 1643 aa12.66□□□□□ -0.38
ATM-209ENST00000526567 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
ATM-209ENST00000526567 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
ATM-209ENST00000526567 EIF4G2P78344 907 aaKnown RBP eCLIP12.66□□□□□ -0.38
ATM-209ENST00000526567 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
ATM-209ENST00000526567 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
ATM-209ENST00000526567 SCAF11Q99590 1463 aaKnown RBP12.64□□□□□ -0.39
ATM-209ENST00000526567 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
ATM-209ENST00000526567 LTKP29376 864 aa12.62□□□□□ -0.39
ATM-209ENST00000526567 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATM-209ENST00000526567 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
ATM-209ENST00000526567 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
ATM-209ENST00000526567 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
ATM-209ENST00000526567 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
ATM-209ENST00000526567 C11orf95C9JLR9 678 aaPredicted RBP12.59□□□□□ -0.39
ATM-209ENST00000526567 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
ATM-209ENST00000526567 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
ATM-209ENST00000526567 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
ATM-209ENST00000526567 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
ATM-209ENST00000526567 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
ATM-209ENST00000526567 MED14O60244 1454 aa12.57□□□□□ -0.4
ATM-209ENST00000526567 METP08581 1390 aa12.56□□□□□ -0.4
ATM-209ENST00000526567 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
ATM-209ENST00000526567 TESK2Q96S53 571 aa12.56□□□□□ -0.4
ATM-209ENST00000526567 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
ATM-209ENST00000526567 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
ATM-209ENST00000526567 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
ATM-209ENST00000526567 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
ATM-209ENST00000526567 TRAK1Q9UPV9 953 aa12.55□□□□□ -0.4
ATM-209ENST00000526567 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
ATM-209ENST00000526567 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
ATM-209ENST00000526567 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
ATM-209ENST00000526567 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
ATM-209ENST00000526567 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
ATM-209ENST00000526567 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
ATM-209ENST00000526567 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
ATM-209ENST00000526567 STK26Q9P289 416 aa12.53□□□□□ -0.4
ATM-209ENST00000526567 DLC1Q96QB1 1528 aa12.52□□□□□ -0.4
ATM-209ENST00000526567 KNDC1Q76NI1 1749 aa12.52□□□□□ -0.41
ATM-209ENST00000526567 BCANQ96GW7 911 aa12.52□□□□□ -0.41
ATM-209ENST00000526567 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.41
ATM-209ENST00000526567 PTPRUQ92729 1446 aa12.52□□□□□ -0.41
ATM-209ENST00000526567 CPS1P31327 1500 aa12.52□□□□□ -0.41
ATM-209ENST00000526567 DIEXFQ68CQ4 756 aaKnown RBP12.51□□□□□ -0.41
ATM-209ENST00000526567 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
ATM-209ENST00000526567 TECPR2O15040 1411 aa12.51□□□□□ -0.41
ATM-209ENST00000526567 NPHP4O75161 1426 aaPredicted RBP12.51□□□□□ -0.41
ATM-209ENST00000526567 HSPA2P54652 639 aa12.5□□□□□ -0.41
ATM-209ENST00000526567 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
ATM-209ENST00000526567 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
ATM-209ENST00000526567 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms