RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 SLC52A1Q9NWF4 448 aa18.41■□□□□ 0.54
UBASH3B-204ENST00000526493 USP47Q96K76 1375 aa18.41■□□□□ 0.54
UBASH3B-204ENST00000526493 IDI1Q13907 227 aa18.4■□□□□ 0.54
UBASH3B-204ENST00000526493 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
UBASH3B-204ENST00000526493 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.54
UBASH3B-204ENST00000526493 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
UBASH3B-204ENST00000526493 NEXMIFQ5QGS0 1516 aa18.39■□□□□ 0.53
UBASH3B-204ENST00000526493 IQGAP1P46940 1657 aa18.38■□□□□ 0.53
UBASH3B-204ENST00000526493 CHGAP10645 457 aaKnown RBP18.38■□□□□ 0.53
UBASH3B-204ENST00000526493 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
UBASH3B-204ENST00000526493 CARD11Q9BXL7 1154 aa18.38■□□□□ 0.53
UBASH3B-204ENST00000526493 C3P01024 1663 aa18.38■□□□□ 0.53
UBASH3B-204ENST00000526493 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
UBASH3B-204ENST00000526493 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
UBASH3B-204ENST00000526493 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
UBASH3B-204ENST00000526493 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.53
UBASH3B-204ENST00000526493 KDM5AP29375 1690 aaKnown RBP18.32■□□□□ 0.52
UBASH3B-204ENST00000526493 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
UBASH3B-204ENST00000526493 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
UBASH3B-204ENST00000526493 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
UBASH3B-204ENST00000526493 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
UBASH3B-204ENST00000526493 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
UBASH3B-204ENST00000526493 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
UBASH3B-204ENST00000526493 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
UBASH3B-204ENST00000526493 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
UBASH3B-204ENST00000526493 TNRQ92752 1358 aa18.29■□□□□ 0.52
UBASH3B-204ENST00000526493 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
UBASH3B-204ENST00000526493 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
UBASH3B-204ENST00000526493 ST20-MTHFSA0A0A6YYL1 179 aa18.27■□□□□ 0.52
UBASH3B-204ENST00000526493 MIER1Q8N108 512 aa18.27■□□□□ 0.52
UBASH3B-204ENST00000526493 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
UBASH3B-204ENST00000526493 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
UBASH3B-204ENST00000526493 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
UBASH3B-204ENST00000526493 VGFO15240 615 aaPredicted RBP18.24■□□□□ 0.51
UBASH3B-204ENST00000526493 ADGRB1O14514 1584 aa18.24■□□□□ 0.51
UBASH3B-204ENST00000526493 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
UBASH3B-204ENST00000526493 CEBPAP49715 358 aaPredicted RBP18.22■□□□□ 0.51
UBASH3B-204ENST00000526493 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
UBASH3B-204ENST00000526493 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
UBASH3B-204ENST00000526493 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
UBASH3B-204ENST00000526493 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
UBASH3B-204ENST00000526493 TESK2Q96S53 571 aa18.2■□□□□ 0.5
UBASH3B-204ENST00000526493 RIMS2Q9UQ26 1411 aa18.2■□□□□ 0.5
UBASH3B-204ENST00000526493 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
UBASH3B-204ENST00000526493 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
UBASH3B-204ENST00000526493 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
UBASH3B-204ENST00000526493 ALKQ9UM73 1620 aa18.17■□□□□ 0.5
UBASH3B-204ENST00000526493 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
UBASH3B-204ENST00000526493 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
UBASH3B-204ENST00000526493 QRICH2Q9H0J4 1663 aa18.15■□□□□ 0.5
UBASH3B-204ENST00000526493 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
UBASH3B-204ENST00000526493 TMEM132EQ6IEE7 984 aa18.13■□□□□ 0.49
UBASH3B-204ENST00000526493 SETD1BQ9UPS6 1966 aaKnown RBP18.12■□□□□ 0.49
UBASH3B-204ENST00000526493 TMEM2Q9UHN6 1383 aa18.12■□□□□ 0.49
UBASH3B-204ENST00000526493 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
UBASH3B-204ENST00000526493 PTPRMP28827 1452 aa18.11■□□□□ 0.49
UBASH3B-204ENST00000526493 ZNF142P52746 1687 aaPredicted RBP18.11■□□□□ 0.49
UBASH3B-204ENST00000526493 SLIT1O75093 1534 aa18.1■□□□□ 0.49
UBASH3B-204ENST00000526493 TMF1P82094 1093 aa18.1■□□□□ 0.49
UBASH3B-204ENST00000526493 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
UBASH3B-204ENST00000526493 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
UBASH3B-204ENST00000526493 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
UBASH3B-204ENST00000526493 SBNO2Q9Y2G9 1366 aa18.08■□□□□ 0.49
UBASH3B-204ENST00000526493 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
UBASH3B-204ENST00000526493 MYOM1P52179 1685 aa18.08■□□□□ 0.48
UBASH3B-204ENST00000526493 ANP32CO43423 234 aa18.07■□□□□ 0.48
UBASH3B-204ENST00000526493 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
UBASH3B-204ENST00000526493 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
UBASH3B-204ENST00000526493 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
UBASH3B-204ENST00000526493 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
UBASH3B-204ENST00000526493 LTKP29376 864 aa18.03■□□□□ 0.48
UBASH3B-204ENST00000526493 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
UBASH3B-204ENST00000526493 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
UBASH3B-204ENST00000526493 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
UBASH3B-204ENST00000526493 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
UBASH3B-204ENST00000526493 ADAMTS13Q76LX8 1427 aa18■□□□□ 0.47
UBASH3B-204ENST00000526493 CDCA8Q53HL2 280 aa18■□□□□ 0.47
UBASH3B-204ENST00000526493 STK26Q9P289 416 aa18■□□□□ 0.47
UBASH3B-204ENST00000526493 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
UBASH3B-204ENST00000526493 MED14O60244 1454 aa18■□□□□ 0.47
UBASH3B-204ENST00000526493 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
UBASH3B-204ENST00000526493 METP08581 1390 aa17.99■□□□□ 0.47
UBASH3B-204ENST00000526493 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
UBASH3B-204ENST00000526493 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
UBASH3B-204ENST00000526493 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
UBASH3B-204ENST00000526493 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
UBASH3B-204ENST00000526493 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
UBASH3B-204ENST00000526493 DIP2AQ14689 1571 aa17.96■□□□□ 0.46
UBASH3B-204ENST00000526493 CPS1P31327 1500 aa17.95■□□□□ 0.46
UBASH3B-204ENST00000526493 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
UBASH3B-204ENST00000526493 TECPR2O15040 1411 aa17.94■□□□□ 0.46
UBASH3B-204ENST00000526493 BCANQ96GW7 911 aa17.93■□□□□ 0.46
UBASH3B-204ENST00000526493 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
UBASH3B-204ENST00000526493 PANK3Q9H999 370 aa17.93■□□□□ 0.46
UBASH3B-204ENST00000526493 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
UBASH3B-204ENST00000526493 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
UBASH3B-204ENST00000526493 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
UBASH3B-204ENST00000526493 POGKQ9P215 609 aa17.9■□□□□ 0.46
UBASH3B-204ENST00000526493 PLEKHH1Q9ULM0 1364 aa17.9■□□□□ 0.46
UBASH3B-204ENST00000526493 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms