RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
COPB1-204ENST00000526191 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
COPB1-204ENST00000526191 APLP1P51693 650 aa13.6□□□□□ -0.23
COPB1-204ENST00000526191 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
COPB1-204ENST00000526191 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
COPB1-204ENST00000526191 IRF6O14896 467 aa13.58□□□□□ -0.24
COPB1-204ENST00000526191 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
COPB1-204ENST00000526191 SLC10A3P09131 477 aa13.56□□□□□ -0.24
COPB1-204ENST00000526191 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
COPB1-204ENST00000526191 ITGBL1O95965 494 aaPredicted RBP13.55□□□□□ -0.24
COPB1-204ENST00000526191 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
COPB1-204ENST00000526191 ZMYND10O75800 440 aa13.53□□□□□ -0.24
COPB1-204ENST00000526191 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
COPB1-204ENST00000526191 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
COPB1-204ENST00000526191 BCANQ96GW7 911 aa13.52□□□□□ -0.25
COPB1-204ENST00000526191 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
COPB1-204ENST00000526191 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
COPB1-204ENST00000526191 MTRQ99707 1265 aa13.51□□□□□ -0.25
COPB1-204ENST00000526191 CFHP08603 1231 aa13.5□□□□□ -0.25
COPB1-204ENST00000526191 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
COPB1-204ENST00000526191 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
COPB1-204ENST00000526191 KCNC4Q03721 635 aa13.49□□□□□ -0.25
COPB1-204ENST00000526191 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
COPB1-204ENST00000526191 COPS2P61201 443 aa13.46□□□□□ -0.25
COPB1-204ENST00000526191 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
COPB1-204ENST00000526191 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
COPB1-204ENST00000526191 ZNF516Q92618 1163 aa13.46□□□□□ -0.25
COPB1-204ENST00000526191 PRR14Q9BWN1 585 aa13.45□□□□□ -0.26
COPB1-204ENST00000526191 IL21Q9HBE4 155 aa13.45□□□□□ -0.26
COPB1-204ENST00000526191 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
COPB1-204ENST00000526191 A0A0G2JS52 829 aa13.43□□□□□ -0.26
COPB1-204ENST00000526191 ACTN4O43707 911 aaKnown RBP13.43□□□□□ -0.26
COPB1-204ENST00000526191 BLOC1S3Q6QNY0 202 aa13.42□□□□□ -0.26
COPB1-204ENST00000526191 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
COPB1-204ENST00000526191 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
COPB1-204ENST00000526191 REPIN1Q9BWE0 567 aaKnown RBP13.38□□□□□ -0.27
COPB1-204ENST00000526191 NKX2-3Q8TAU0 364 aa13.37□□□□□ -0.27
COPB1-204ENST00000526191 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
COPB1-204ENST00000526191 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
COPB1-204ENST00000526191 ZPR1O75312 459 aa13.36□□□□□ -0.27
COPB1-204ENST00000526191 CD46P15529 392 aa13.36□□□□□ -0.27
COPB1-204ENST00000526191 GCGRP47871 477 aa13.36□□□□□ -0.27
COPB1-204ENST00000526191 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
COPB1-204ENST00000526191 CLCN1P35523 988 aa13.35□□□□□ -0.27
COPB1-204ENST00000526191 FUT2Q10981 343 aa13.34□□□□□ -0.27
COPB1-204ENST00000526191 TLL1O43897 1013 aa13.33□□□□□ -0.28
COPB1-204ENST00000526191 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
COPB1-204ENST00000526191 TRIM66O15016 1216 aa13.32□□□□□ -0.28
COPB1-204ENST00000526191 AMHR2Q16671 573 aa13.32□□□□□ -0.28
COPB1-204ENST00000526191 AK7Q96M32 723 aa13.32□□□□□ -0.28
COPB1-204ENST00000526191 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
COPB1-204ENST00000526191 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
COPB1-204ENST00000526191 NR1I2O75469 434 aa13.28□□□□□ -0.28
COPB1-204ENST00000526191 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
COPB1-204ENST00000526191 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
COPB1-204ENST00000526191 MORN1Q5T089 497 aa13.27□□□□□ -0.29
COPB1-204ENST00000526191 PPP1R18Q6NYC8 613 aa13.27□□□□□ -0.29
COPB1-204ENST00000526191 SSTR3P32745 418 aaPredicted RBP13.25□□□□□ -0.29
COPB1-204ENST00000526191 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
COPB1-204ENST00000526191 PARP9Q8IXQ6 854 aa13.25□□□□□ -0.29
COPB1-204ENST00000526191 KDM4AO75164 1064 aa13.24□□□□□ -0.29
COPB1-204ENST00000526191 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
COPB1-204ENST00000526191 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
COPB1-204ENST00000526191 ADH1BP00325 375 aa13.21□□□□□ -0.29
COPB1-204ENST00000526191 PDE4DQ08499 809 aa13.21□□□□□ -0.29
COPB1-204ENST00000526191 HLA-CQ95604 372 aa13.21□□□□□ -0.29
COPB1-204ENST00000526191 RGS20O76081 388 aa13.2□□□□□ -0.3
COPB1-204ENST00000526191 S1PR4O95977 384 aa13.18□□□□□ -0.3
COPB1-204ENST00000526191 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
COPB1-204ENST00000526191 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
COPB1-204ENST00000526191 SPSB2Q99619 263 aa13.18□□□□□ -0.3
COPB1-204ENST00000526191 HOXA2O43364 376 aa13.17□□□□□ -0.3
COPB1-204ENST00000526191 MS4A1P11836 297 aa13.17□□□□□ -0.3
COPB1-204ENST00000526191 GGCXP38435 758 aa13.16□□□□□ -0.3
COPB1-204ENST00000526191 USP46P62068 366 aa13.16□□□□□ -0.3
COPB1-204ENST00000526191 GUCA2AQ02747 115 aa13.16□□□□□ -0.3
COPB1-204ENST00000526191 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
COPB1-204ENST00000526191 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
COPB1-204ENST00000526191 RNF223E7ERA6 249 aa13.15□□□□□ -0.3
COPB1-204ENST00000526191 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
COPB1-204ENST00000526191 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
COPB1-204ENST00000526191 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
COPB1-204ENST00000526191 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
COPB1-204ENST00000526191 BRICD5Q6PL45 260 aa13.14□□□□□ -0.31
COPB1-204ENST00000526191 SPIRE2Q8WWL2 714 aa13.13□□□□□ -0.31
COPB1-204ENST00000526191 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
COPB1-204ENST00000526191 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
COPB1-204ENST00000526191 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
COPB1-204ENST00000526191 PRDM9Q9NQV7 894 aa13.1□□□□□ -0.31
COPB1-204ENST00000526191 NDUFV2P19404 249 aa13.08□□□□□ -0.32
COPB1-204ENST00000526191 Q3C1V9 767 aa13.08□□□□□ -0.32
COPB1-204ENST00000526191 MOXD2PA6NHM9 499 aa13.07□□□□□ -0.32
COPB1-204ENST00000526191 ANKLE1Q8NAG6 615 aa13.07□□□□□ -0.32
COPB1-204ENST00000526191 SYMPKQ92797 1274 aaKnown RBP13.07□□□□□ -0.32
COPB1-204ENST00000526191 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
COPB1-204ENST00000526191 PCDHGC3Q9UN70 934 aa13.06□□□□□ -0.32
COPB1-204ENST00000526191 FDX1P10109 184 aa13.05□□□□□ -0.32
COPB1-204ENST00000526191 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
COPB1-204ENST00000526191 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
COPB1-204ENST00000526191 PLA2G2CQ5R387 149 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms