RNA–Protein interactions for RNA: ENST00000525861.5

ACER3-204, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-204ENST00000525861 RPGRIP1LQ68CZ1 1315 aa32.31■■■□□ 2.76
ACER3-204ENST00000525861 ERVK-7P63135 1459 aa32.31■■■□□ 2.76
ACER3-204ENST00000525861 ADGRF5Q8IZF2 1346 aa32.3■■■□□ 2.76
ACER3-204ENST00000525861 IQGAP1P46940 1657 aa32.29■■■□□ 2.76
ACER3-204ENST00000525861 MLECQ14165 292 aa32.28■■■□□ 2.76
ACER3-204ENST00000525861 IDI1Q13907 227 aa32.28■■■□□ 2.76
ACER3-204ENST00000525861 FBXO31Q5XUX0 539 aaPredicted RBP32.24■■■□□ 2.75
ACER3-204ENST00000525861 SCAF11Q99590 1463 aaKnown RBP32.24■■■□□ 2.75
ACER3-204ENST00000525861 YTHDC1Q96MU7 727 aaKnown RBP32.23■■■□□ 2.75
ACER3-204ENST00000525861 SPATA31D1Q6ZQQ2 1576 aa32.22■■■□□ 2.75
ACER3-204ENST00000525861 PIK3C2GO75747 1445 aa32.21■■■□□ 2.75
ACER3-204ENST00000525861 NEXMIFQ5QGS0 1516 aa32.21■■■□□ 2.75
ACER3-204ENST00000525861 CCER2I3L3R5 266 aa32.21■■■□□ 2.75
ACER3-204ENST00000525861 TESK2Q96S53 571 aa32.2■■■□□ 2.75
ACER3-204ENST00000525861 TMEM131LA2VDJ0 1609 aa32.2■■■□□ 2.75
ACER3-204ENST00000525861 CENPBP07199 599 aaPredicted RBP32.19■■■□□ 2.74
ACER3-204ENST00000525861 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
ACER3-204ENST00000525861 POLR3GLQ9BT43 218 aa32.18■■■□□ 2.74
ACER3-204ENST00000525861 ESF1Q9H501 851 aaKnown RBP32.18■■■□□ 2.74
ACER3-204ENST00000525861 SETBP1Q9Y6X0 1596 aa32.15■■■□□ 2.74
ACER3-204ENST00000525861 MYO5BQ9ULV0 1848 aa32.15■■■□□ 2.74
ACER3-204ENST00000525861 EIF3AQ14152 1382 aaKnown RBP32.14■■■□□ 2.73
ACER3-204ENST00000525861 ZMYM3Q14202 1370 aa32.14■■■□□ 2.73
ACER3-204ENST00000525861 VGFO15240 615 aaPredicted RBP32.13■■■□□ 2.73
ACER3-204ENST00000525861 ZFYVE9O95405 1425 aa32.12■■■□□ 2.73
ACER3-204ENST00000525861 C14orf93Q9H972 538 aaKnown RBP32.11■■■□□ 2.73
ACER3-204ENST00000525861 DISP3Q9P2K9 1392 aa32.1■■■□□ 2.73
ACER3-204ENST00000525861 TMF1P82094 1093 aa32.09■■■□□ 2.73
ACER3-204ENST00000525861 ADGRB1O14514 1584 aa32.05■■■□□ 2.72
ACER3-204ENST00000525861 PRKRIP1Q9H875 184 aaPredicted RBP32.05■■■□□ 2.72
ACER3-204ENST00000525861 NUTM2DQ5VT03 806 aaPredicted RBP32.02■■■□□ 2.72
ACER3-204ENST00000525861 STAG3Q9UJ98 1225 aa32.02■■■□□ 2.72
ACER3-204ENST00000525861 A2ML1A8K2U0 1454 aa32.01■■■□□ 2.71
ACER3-204ENST00000525861 MYO3AQ8NEV4 1616 aa32■■■□□ 2.71
ACER3-204ENST00000525861 SLC24A1O60721 1099 aa31.96■■■□□ 2.71
ACER3-204ENST00000525861 TNRQ92752 1358 aa31.95■■■□□ 2.71
ACER3-204ENST00000525861 CDCA8Q53HL2 280 aa31.95■■■□□ 2.7
ACER3-204ENST00000525861 SBNO2Q9Y2G9 1366 aa31.93■■■□□ 2.7
ACER3-204ENST00000525861 TMEM132EQ6IEE7 984 aa31.91■■■□□ 2.7
ACER3-204ENST00000525861 FER1L4A9Z1Z3 1794 aa31.89■■■□□ 2.7
ACER3-204ENST00000525861 CENPJQ9HC77 1338 aaPredicted RBP31.89■■■□□ 2.7
ACER3-204ENST00000525861 RIMS2Q9UQ26 1411 aa31.89■■■□□ 2.7
ACER3-204ENST00000525861 KDM5AP29375 1690 aaKnown RBP31.88■■■□□ 2.69
ACER3-204ENST00000525861 TRAK1Q9UPV9 953 aa31.88■■■□□ 2.69
ACER3-204ENST00000525861 ASXL1Q8IXJ9 1541 aa31.86■■■□□ 2.69
ACER3-204ENST00000525861 C3P01024 1663 aa31.84■■■□□ 2.69
ACER3-204ENST00000525861 QRICH2Q9H0J4 1663 aa31.83■■■□□ 2.69
ACER3-204ENST00000525861 ARHGEF28Q8N1W1 1705 aaKnown RBP31.83■■■□□ 2.69
ACER3-204ENST00000525861 ALKQ9UM73 1620 aa31.82■■■□□ 2.68
ACER3-204ENST00000525861 PER1O15534 1290 aaPredicted RBP31.82■■■□□ 2.68
ACER3-204ENST00000525861 KTN1Q86UP2 1357 aaKnown RBP31.82■■■□□ 2.68
ACER3-204ENST00000525861 NLRP1Q9C000 1473 aa31.81■■■□□ 2.68
ACER3-204ENST00000525861 UBR1Q8IWV7 1749 aa31.81■■■□□ 2.68
ACER3-204ENST00000525861 PANK3Q9H999 370 aa31.8■■■□□ 2.68
ACER3-204ENST00000525861 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.79■■■□□ 2.68
ACER3-204ENST00000525861 MYOM1P52179 1685 aa31.79■■■□□ 2.68
ACER3-204ENST00000525861 CEBPAP49715 358 aaPredicted RBP31.77■■■□□ 2.68
ACER3-204ENST00000525861 CCDC184Q52MB2 194 aa31.77■■■□□ 2.68
ACER3-204ENST00000525861 MRS2Q9HD23 443 aa31.75■■■□□ 2.67
ACER3-204ENST00000525861 RALBP1Q15311 655 aa31.74■■■□□ 2.67
ACER3-204ENST00000525861 YTHDC2Q9H6S0 1430 aaKnown RBP31.74■■■□□ 2.67
ACER3-204ENST00000525861 CNGB1Q14028 1251 aaPredicted RBP31.74■■■□□ 2.67
ACER3-204ENST00000525861 SENP3Q9H4L4 574 aaPredicted RBP31.74■■■□□ 2.67
ACER3-204ENST00000525861 HDGFP51858 240 aaKnown RBP31.73■■■□□ 2.67
ACER3-204ENST00000525861 TMEM2Q9UHN6 1383 aa31.72■■■□□ 2.67
ACER3-204ENST00000525861 SETD1AO15047 1707 aaKnown RBP31.72■■■□□ 2.67
ACER3-204ENST00000525861 PTPRMP28827 1452 aa31.7■■■□□ 2.67
ACER3-204ENST00000525861 NRXN3Q9Y4C0 1643 aa31.7■■■□□ 2.67
ACER3-204ENST00000525861 PARD3Q8TEW0 1356 aa31.7■■■□□ 2.66
ACER3-204ENST00000525861 STK26Q9P289 416 aa31.68■■■□□ 2.66
ACER3-204ENST00000525861 MYBBP1AQ9BQG0 1328 aaKnown RBP31.66■■■□□ 2.66
ACER3-204ENST00000525861 TULP4Q9NRJ4 1543 aa31.63■■■□□ 2.65
ACER3-204ENST00000525861 EVC2Q86UK5 1308 aa31.62■■■□□ 2.65
ACER3-204ENST00000525861 PUS7Q96PZ0 661 aaKnown RBP31.62■■■□□ 2.65
ACER3-204ENST00000525861 KNSTRNQ9Y448 316 aa31.62■■■□□ 2.65
ACER3-204ENST00000525861 DLC1Q96QB1 1528 aa31.61■■■□□ 2.65
ACER3-204ENST00000525861 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
ACER3-204ENST00000525861 RIMS1Q86UR5 1692 aaKnown RBP31.61■■■□□ 2.65
ACER3-204ENST00000525861 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
ACER3-204ENST00000525861 BRD4O60885 1362 aaPredicted RBP31.59■■■□□ 2.65
ACER3-204ENST00000525861 ADAMTSL3P82987 1691 aa31.59■■■□□ 2.65
ACER3-204ENST00000525861 CC2D1BQ5T0F9 858 aaKnown RBP31.58■■■□□ 2.65
ACER3-204ENST00000525861 PRAM1Q96QH2 718 aa31.58■■■□□ 2.65
ACER3-204ENST00000525861 SLIT1O75093 1534 aa31.57■■■□□ 2.64
ACER3-204ENST00000525861 ABCC11Q96J66 1382 aa31.57■■■□□ 2.64
ACER3-204ENST00000525861 FAM9BQ8IZU0 186 aa31.56■■■□□ 2.64
ACER3-204ENST00000525861 ARHGAP23Q9P227 1491 aa31.56■■■□□ 2.64
ACER3-204ENST00000525861 SAFB2Q14151 953 aaKnown RBP eCLIP31.56■■■□□ 2.64
ACER3-204ENST00000525861 POGKQ9P215 609 aa31.56■■■□□ 2.64
ACER3-204ENST00000525861 NPC1L1Q9UHC9 1359 aa31.55■■■□□ 2.64
ACER3-204ENST00000525861 AMER1Q5JTC6 1135 aaPredicted RBP31.55■■■□□ 2.64
ACER3-204ENST00000525861 PLEKHG1Q9ULL1 1385 aa31.55■■■□□ 2.64
ACER3-204ENST00000525861 TMC1Q8TDI8 760 aa31.55■■■□□ 2.64
ACER3-204ENST00000525861 NLRP13Q86W25 1043 aa31.54■■■□□ 2.64
ACER3-204ENST00000525861 SCAF1Q9H7N4 1312 aaKnown RBP31.54■■■□□ 2.64
ACER3-204ENST00000525861 METP08581 1390 aa31.54■■■□□ 2.64
ACER3-204ENST00000525861 LTKP29376 864 aa31.52■■■□□ 2.64
ACER3-204ENST00000525861 HNRNPUQ00839 825 aaKnown RBP eCLIP31.52■■■□□ 2.64
ACER3-204ENST00000525861 THEMISQ8N1K5 641 aaPredicted RBP31.5■■■□□ 2.63
ACER3-204ENST00000525861 ADAMTS13Q76LX8 1427 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms