RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 ADGRB3O60242 1522 aa22.42■■□□□ 1.18
ROM1-202ENST00000525801 RIMS2Q9UQ26 1411 aa22.41■■□□□ 1.18
ROM1-202ENST00000525801 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
ROM1-202ENST00000525801 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
ROM1-202ENST00000525801 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
ROM1-202ENST00000525801 MSH6P52701 1360 aa22.38■■□□□ 1.17
ROM1-202ENST00000525801 TET3O43151 1660 aa22.38■■□□□ 1.17
ROM1-202ENST00000525801 FAM135BQ49AJ0 1406 aa22.38■■□□□ 1.17
ROM1-202ENST00000525801 SLAIN2Q9P270 581 aa22.37■■□□□ 1.17
ROM1-202ENST00000525801 NUP155O75694 1391 aa22.35■■□□□ 1.17
ROM1-202ENST00000525801 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
ROM1-202ENST00000525801 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
ROM1-202ENST00000525801 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
ROM1-202ENST00000525801 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
ROM1-202ENST00000525801 ZFYVE9O95405 1425 aa22.31■■□□□ 1.16
ROM1-202ENST00000525801 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
ROM1-202ENST00000525801 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
ROM1-202ENST00000525801 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
ROM1-202ENST00000525801 KDM5AP29375 1690 aaKnown RBP22.3■■□□□ 1.16
ROM1-202ENST00000525801 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
ROM1-202ENST00000525801 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
ROM1-202ENST00000525801 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
ROM1-202ENST00000525801 ATF3P18847 181 aa22.27■■□□□ 1.16
ROM1-202ENST00000525801 AMOTL2Q9Y2J4 779 aa22.26■■□□□ 1.15
ROM1-202ENST00000525801 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
ROM1-202ENST00000525801 MEX3CQ5U5Q3 659 aaKnown RBP22.25■■□□□ 1.15
ROM1-202ENST00000525801 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
ROM1-202ENST00000525801 NWD1Q149M9 1564 aa22.24■■□□□ 1.15
ROM1-202ENST00000525801 UNC13BO14795 1591 aa22.23■■□□□ 1.15
ROM1-202ENST00000525801 E9PCH4 1651 aa22.23■■□□□ 1.15
ROM1-202ENST00000525801 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
ROM1-202ENST00000525801 JCADQ9P266 1359 aa22.21■■□□□ 1.15
ROM1-202ENST00000525801 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
ROM1-202ENST00000525801 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
ROM1-202ENST00000525801 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
ROM1-202ENST00000525801 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
ROM1-202ENST00000525801 C19orf44Q9H6X5 657 aa22.2■■□□□ 1.14
ROM1-202ENST00000525801 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
ROM1-202ENST00000525801 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
ROM1-202ENST00000525801 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
ROM1-202ENST00000525801 IQGAP3Q86VI3 1631 aa22.16■■□□□ 1.14
ROM1-202ENST00000525801 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
ROM1-202ENST00000525801 BRINP3Q76B58 766 aa22.12■■□□□ 1.13
ROM1-202ENST00000525801 DDX17Q92841 729 aaKnown RBP22.12■■□□□ 1.13
ROM1-202ENST00000525801 TRPM2O94759 1503 aa22.1■■□□□ 1.13
ROM1-202ENST00000525801 METP08581 1390 aa22.1■■□□□ 1.13
ROM1-202ENST00000525801 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
ROM1-202ENST00000525801 NCOA3Q9Y6Q9 1424 aa22.09■■□□□ 1.13
ROM1-202ENST00000525801 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
ROM1-202ENST00000525801 LRP6O75581 1613 aa22.07■■□□□ 1.12
ROM1-202ENST00000525801 DIP2AQ14689 1571 aa22.07■■□□□ 1.12
ROM1-202ENST00000525801 SPATA31A6Q5VVP1 1343 aa22.06■■□□□ 1.12
ROM1-202ENST00000525801 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
ROM1-202ENST00000525801 ZNF772Q68DY9 489 aaPredicted RBP22.04■■□□□ 1.12
ROM1-202ENST00000525801 SETD1AO15047 1707 aaKnown RBP22.02■■□□□ 1.12
ROM1-202ENST00000525801 FOXD1Q16676 465 aa22.01■■□□□ 1.11
ROM1-202ENST00000525801 SLC4A1APQ9BWU0 796 aaKnown RBP22.01■■□□□ 1.11
ROM1-202ENST00000525801 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
ROM1-202ENST00000525801 C8orf37Q96NL8 207 aa22■■□□□ 1.11
ROM1-202ENST00000525801 RXRBP28702 533 aa21.99■■□□□ 1.11
ROM1-202ENST00000525801 NAIPQ13075 1403 aa21.98■■□□□ 1.11
ROM1-202ENST00000525801 AFF2P51816 1311 aa21.98■■□□□ 1.11
ROM1-202ENST00000525801 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
ROM1-202ENST00000525801 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
ROM1-202ENST00000525801 MST1RQ04912 1400 aa21.97■■□□□ 1.11
ROM1-202ENST00000525801 ADAMTS2O95450 1211 aa21.97■■□□□ 1.11
ROM1-202ENST00000525801 LRRC59Q96AG4 307 aaKnown RBP21.97■■□□□ 1.11
ROM1-202ENST00000525801 AHDC1Q5TGY3 1603 aaPredicted RBP21.97■■□□□ 1.11
ROM1-202ENST00000525801 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
ROM1-202ENST00000525801 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
ROM1-202ENST00000525801 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
ROM1-202ENST00000525801 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
ROM1-202ENST00000525801 ORAI2Q96SN7 254 aa21.94■■□□□ 1.1
ROM1-202ENST00000525801 NEXMIFQ5QGS0 1516 aa21.93■■□□□ 1.1
ROM1-202ENST00000525801 RRBP1Q9P2E9 1410 aaKnown RBP21.93■■□□□ 1.1
ROM1-202ENST00000525801 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
ROM1-202ENST00000525801 DCCP43146 1447 aa21.92■■□□□ 1.1
ROM1-202ENST00000525801 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
ROM1-202ENST00000525801 UPF1Q92900 1129 aaKnown RBP eCLIP21.92■■□□□ 1.1
ROM1-202ENST00000525801 STK26Q9P289 416 aa21.92■■□□□ 1.1
ROM1-202ENST00000525801 QTRT2Q9H974 415 aaKnown RBP21.91■■□□□ 1.1
ROM1-202ENST00000525801 NUTM2FA1L443 756 aa21.9■■□□□ 1.1
ROM1-202ENST00000525801 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
ROM1-202ENST00000525801 ROBO2Q9HCK4 1378 aa21.89■■□□□ 1.1
ROM1-202ENST00000525801 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
ROM1-202ENST00000525801 SETD5Q9C0A6 1442 aa21.88■■□□□ 1.09
ROM1-202ENST00000525801 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
ROM1-202ENST00000525801 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
ROM1-202ENST00000525801 XPCQ01831 940 aaPredicted RBP21.86■■□□□ 1.09
ROM1-202ENST00000525801 KIF1BO60333 1816 aa21.85■■□□□ 1.09
ROM1-202ENST00000525801 ESCO1Q5FWF5 840 aa21.85■■□□□ 1.09
ROM1-202ENST00000525801 NALCNQ8IZF0 1738 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 RPGRIP1LQ68CZ1 1315 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 ADGRF5Q8IZF2 1346 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 HFM1A2PYH4 1435 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 WAPLQ7Z5K2 1190 aa21.83■■□□□ 1.09
ROM1-202ENST00000525801 TMEM132EQ6IEE7 984 aa21.82■■□□□ 1.08
ROM1-202ENST00000525801 RBM6P78332 1123 aaKnown RBP21.8■■□□□ 1.08
ROM1-202ENST00000525801 USP21Q9UK80 565 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms