RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 MRE11P49959 708 aa18.99■□□□□ 0.63
LTBP3-204ENST00000525443 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
LTBP3-204ENST00000525443 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
LTBP3-204ENST00000525443 PREX2Q70Z35 1606 aa18.98■□□□□ 0.63
LTBP3-204ENST00000525443 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
LTBP3-204ENST00000525443 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
LTBP3-204ENST00000525443 PLCH2O75038 1416 aa18.96■□□□□ 0.63
LTBP3-204ENST00000525443 TEX14Q8IWB6 1497 aa18.96■□□□□ 0.63
LTBP3-204ENST00000525443 GRPEL1Q9HAV7 217 aa18.96■□□□□ 0.63
LTBP3-204ENST00000525443 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
LTBP3-204ENST00000525443 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
LTBP3-204ENST00000525443 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
LTBP3-204ENST00000525443 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
LTBP3-204ENST00000525443 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
LTBP3-204ENST00000525443 UHRF1BP1LA0JNW5 1464 aa18.95■□□□□ 0.62
LTBP3-204ENST00000525443 ZCCHC11Q5TAX3 1644 aaKnown RBP18.94■□□□□ 0.62
LTBP3-204ENST00000525443 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
LTBP3-204ENST00000525443 PLEKHH2Q8IVE3 1493 aa18.93■□□□□ 0.62
LTBP3-204ENST00000525443 IPO4Q8TEX9 1081 aaKnown RBP18.92■□□□□ 0.62
LTBP3-204ENST00000525443 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
LTBP3-204ENST00000525443 SPAG9O60271 1321 aaKnown RBP18.92■□□□□ 0.62
LTBP3-204ENST00000525443 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
LTBP3-204ENST00000525443 PLCD3Q8N3E9 789 aa18.91■□□□□ 0.62
LTBP3-204ENST00000525443 VGLL3A8MV65 326 aa18.91■□□□□ 0.62
LTBP3-204ENST00000525443 BECN1Q14457 450 aa18.91■□□□□ 0.62
LTBP3-204ENST00000525443 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
LTBP3-204ENST00000525443 C20orf194Q5TEA3 1177 aa18.9■□□□□ 0.62
LTBP3-204ENST00000525443 SPRYD3Q8NCJ5 442 aa18.9■□□□□ 0.62
LTBP3-204ENST00000525443 CDCA7LQ96GN5 454 aa18.9■□□□□ 0.62
LTBP3-204ENST00000525443 MCM4P33991 863 aa18.9■□□□□ 0.62
LTBP3-204ENST00000525443 USP19O94966 1318 aa18.9■□□□□ 0.62
LTBP3-204ENST00000525443 TRAK2O60296 914 aa18.89■□□□□ 0.62
LTBP3-204ENST00000525443 TRAPPC8Q9Y2L5 1435 aa18.89■□□□□ 0.61
LTBP3-204ENST00000525443 DMTNQ08495 405 aa18.89■□□□□ 0.61
LTBP3-204ENST00000525443 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
LTBP3-204ENST00000525443 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
LTBP3-204ENST00000525443 R3HCC1Q9Y3T6 440 aaKnown RBP18.88■□□□□ 0.61
LTBP3-204ENST00000525443 OFD1O75665 1012 aa18.87■□□□□ 0.61
LTBP3-204ENST00000525443 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
LTBP3-204ENST00000525443 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
LTBP3-204ENST00000525443 TMEM51Q9NW97 253 aa18.87■□□□□ 0.61
LTBP3-204ENST00000525443 DHX29Q7Z478 1369 aaKnown RBP18.86■□□□□ 0.61
LTBP3-204ENST00000525443 SEC24BO95487 1268 aa18.85■□□□□ 0.61
LTBP3-204ENST00000525443 FAM135AQ9P2D6 1515 aa18.85■□□□□ 0.61
LTBP3-204ENST00000525443 ZNF830Q96NB3 372 aaPredicted RBP18.85■□□□□ 0.61
LTBP3-204ENST00000525443 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
LTBP3-204ENST00000525443 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
LTBP3-204ENST00000525443 UTP14CQ5TAP6 766 aaKnown RBP18.84■□□□□ 0.61
LTBP3-204ENST00000525443 ANP32BQ92688 251 aaKnown RBP18.84■□□□□ 0.61
LTBP3-204ENST00000525443 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
LTBP3-204ENST00000525443 USP47Q96K76 1375 aa18.83■□□□□ 0.61
LTBP3-204ENST00000525443 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
LTBP3-204ENST00000525443 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.82■□□□□ 0.6
LTBP3-204ENST00000525443 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
LTBP3-204ENST00000525443 UQCRHLA0A096LP55 91 aa18.81■□□□□ 0.6
LTBP3-204ENST00000525443 UQCRHP07919 91 aa18.81■□□□□ 0.6
LTBP3-204ENST00000525443 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
LTBP3-204ENST00000525443 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
LTBP3-204ENST00000525443 GAS2L3Q86XJ1 694 aa18.8■□□□□ 0.6
LTBP3-204ENST00000525443 KLHL34Q8N239 644 aa18.8■□□□□ 0.6
LTBP3-204ENST00000525443 FANCAO15360 1455 aa18.79■□□□□ 0.6
LTBP3-204ENST00000525443 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
LTBP3-204ENST00000525443 KIF3BO15066 747 aa18.79■□□□□ 0.6
LTBP3-204ENST00000525443 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
LTBP3-204ENST00000525443 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
LTBP3-204ENST00000525443 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
LTBP3-204ENST00000525443 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
LTBP3-204ENST00000525443 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.59
LTBP3-204ENST00000525443 MSNP26038 577 aaKnown RBP18.77■□□□□ 0.59
LTBP3-204ENST00000525443 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.59
LTBP3-204ENST00000525443 TERF1P54274 439 aa18.77■□□□□ 0.59
LTBP3-204ENST00000525443 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.59
LTBP3-204ENST00000525443 ABCC1P33527 1531 aa18.76■□□□□ 0.59
LTBP3-204ENST00000525443 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
LTBP3-204ENST00000525443 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
LTBP3-204ENST00000525443 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
LTBP3-204ENST00000525443 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
LTBP3-204ENST00000525443 ADGRL1O94910 1474 aa18.73■□□□□ 0.59
LTBP3-204ENST00000525443 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
LTBP3-204ENST00000525443 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
LTBP3-204ENST00000525443 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
LTBP3-204ENST00000525443 ZBTB22O15209 634 aa18.72■□□□□ 0.59
LTBP3-204ENST00000525443 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
LTBP3-204ENST00000525443 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
LTBP3-204ENST00000525443 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
LTBP3-204ENST00000525443 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
LTBP3-204ENST00000525443 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
LTBP3-204ENST00000525443 XPCQ01831 940 aaPredicted RBP18.7■□□□□ 0.58
LTBP3-204ENST00000525443 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
LTBP3-204ENST00000525443 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
LTBP3-204ENST00000525443 CBX1P83916 185 aa18.68■□□□□ 0.58
LTBP3-204ENST00000525443 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
LTBP3-204ENST00000525443 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
LTBP3-204ENST00000525443 DYNC1I1O14576 645 aa18.67■□□□□ 0.58
LTBP3-204ENST00000525443 KIF20AO95235 890 aa18.67■□□□□ 0.58
LTBP3-204ENST00000525443 KANK1Q14678 1352 aa18.67■□□□□ 0.58
LTBP3-204ENST00000525443 UNC13BO14795 1591 aa18.67■□□□□ 0.58
LTBP3-204ENST00000525443 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
LTBP3-204ENST00000525443 ARAP3Q8WWN8 1544 aa18.66■□□□□ 0.58
LTBP3-204ENST00000525443 CHMP5Q9NZZ3 219 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms