RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
NUP98-213ENST00000524563 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
NUP98-213ENST00000524563 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
NUP98-213ENST00000524563 RRBP1Q9P2E9 1410 aaKnown RBP10.01□□□□□ -0.81
NUP98-213ENST00000524563 TMEM131LA2VDJ0 1609 aa10.01□□□□□ -0.81
NUP98-213ENST00000524563 LTKP29376 864 aa10.01□□□□□ -0.81
NUP98-213ENST00000524563 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
NUP98-213ENST00000524563 MSH6P52701 1360 aa10.01□□□□□ -0.81
NUP98-213ENST00000524563 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
NUP98-213ENST00000524563 ANKRD50Q9ULJ7 1429 aa10□□□□□ -0.81
NUP98-213ENST00000524563 NOS1P29475 1434 aa9.99□□□□□ -0.81
NUP98-213ENST00000524563 KIF1BO60333 1816 aa9.99□□□□□ -0.81
NUP98-213ENST00000524563 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
NUP98-213ENST00000524563 C14orf37Q86TY3 774 aa9.98□□□□□ -0.81
NUP98-213ENST00000524563 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
NUP98-213ENST00000524563 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.98□□□□□ -0.81
NUP98-213ENST00000524563 RIMS2Q9UQ26 1411 aa9.98□□□□□ -0.81
NUP98-213ENST00000524563 TRPM2O94759 1503 aa9.97□□□□□ -0.81
NUP98-213ENST00000524563 SLC26A8Q96RN1 970 aa9.97□□□□□ -0.81
NUP98-213ENST00000524563 COL16A1Q07092 1604 aaPredicted RBP9.96□□□□□ -0.81
NUP98-213ENST00000524563 SHPRHQ149N8 1683 aa9.96□□□□□ -0.82
NUP98-213ENST00000524563 IDI1Q13907 227 aa9.95□□□□□ -0.82
NUP98-213ENST00000524563 PLEKHG1Q9ULL1 1385 aa9.95□□□□□ -0.82
NUP98-213ENST00000524563 FAM135BQ49AJ0 1406 aa9.95□□□□□ -0.82
NUP98-213ENST00000524563 ZFYVE9O95405 1425 aa9.94□□□□□ -0.82
NUP98-213ENST00000524563 KCNA6P17658 529 aa9.94□□□□□ -0.82
NUP98-213ENST00000524563 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
NUP98-213ENST00000524563 SLC52A1Q9NWF4 448 aa9.94□□□□□ -0.82
NUP98-213ENST00000524563 XRN1Q8IZH2 1706 aaKnown RBP9.93□□□□□ -0.82
NUP98-213ENST00000524563 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
NUP98-213ENST00000524563 HDGFP51858 240 aaKnown RBP9.92□□□□□ -0.82
NUP98-213ENST00000524563 MEX3CQ5U5Q3 659 aaKnown RBP9.92□□□□□ -0.82
NUP98-213ENST00000524563 NALCNQ8IZF0 1738 aa9.92□□□□□ -0.82
NUP98-213ENST00000524563 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
NUP98-213ENST00000524563 JCADQ9P266 1359 aa9.91□□□□□ -0.82
NUP98-213ENST00000524563 ITGAEP38570 1179 aa9.91□□□□□ -0.82
NUP98-213ENST00000524563 NHSL1Q5SYE7 1610 aa9.9□□□□□ -0.82
NUP98-213ENST00000524563 NRXN3Q9Y4C0 1643 aa9.9□□□□□ -0.82
NUP98-213ENST00000524563 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
NUP98-213ENST00000524563 CLTCL1P53675 1640 aa9.89□□□□□ -0.83
NUP98-213ENST00000524563 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
NUP98-213ENST00000524563 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
NUP98-213ENST00000524563 ATF3P18847 181 aa9.88□□□□□ -0.83
NUP98-213ENST00000524563 NUP155O75694 1391 aa9.88□□□□□ -0.83
NUP98-213ENST00000524563 ZNF326Q5BKZ1 582 aaKnown RBP9.87□□□□□ -0.83
NUP98-213ENST00000524563 NAIPQ13075 1403 aa9.87□□□□□ -0.83
NUP98-213ENST00000524563 ASXL1Q8IXJ9 1541 aa9.87□□□□□ -0.83
NUP98-213ENST00000524563 LRP6O75581 1613 aa9.86□□□□□ -0.83
NUP98-213ENST00000524563 ADAMTS13Q76LX8 1427 aa9.86□□□□□ -0.83
NUP98-213ENST00000524563 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
NUP98-213ENST00000524563 PIK3R4Q99570 1358 aa9.86□□□□□ -0.83
NUP98-213ENST00000524563 PPLO60437 1756 aa9.86□□□□□ -0.83
NUP98-213ENST00000524563 HFM1A2PYH4 1435 aa9.85□□□□□ -0.83
NUP98-213ENST00000524563 NCOA3Q9Y6Q9 1424 aa9.85□□□□□ -0.83
NUP98-213ENST00000524563 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
NUP98-213ENST00000524563 DCCP43146 1447 aa9.84□□□□□ -0.83
NUP98-213ENST00000524563 NEXMIFQ5QGS0 1516 aa9.84□□□□□ -0.83
NUP98-213ENST00000524563 POTEAQ6S8J7 498 aa9.84□□□□□ -0.83
NUP98-213ENST00000524563 RGS17Q9UGC6 210 aaPredicted RBP9.84□□□□□ -0.83
NUP98-213ENST00000524563 SPATA31A6Q5VVP1 1343 aa9.83□□□□□ -0.84
NUP98-213ENST00000524563 TBX22Q9Y458 520 aa9.83□□□□□ -0.84
NUP98-213ENST00000524563 NUTM2BA6NNL0 878 aaPredicted RBP9.82□□□□□ -0.84
NUP98-213ENST00000524563 NUTM2EB1AL46 878 aaPredicted RBP9.82□□□□□ -0.84
NUP98-213ENST00000524563 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
NUP98-213ENST00000524563 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
NUP98-213ENST00000524563 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
NUP98-213ENST00000524563 ADGRL3Q9HAR2 1447 aa9.82□□□□□ -0.84
NUP98-213ENST00000524563 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
NUP98-213ENST00000524563 PTPRUQ92729 1446 aa9.81□□□□□ -0.84
NUP98-213ENST00000524563 C19orf44Q9H6X5 657 aa9.8□□□□□ -0.84
NUP98-213ENST00000524563 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
NUP98-213ENST00000524563 MST1RQ04912 1400 aa9.8□□□□□ -0.84
NUP98-213ENST00000524563 IFT172Q9UG01 1749 aa9.79□□□□□ -0.84
NUP98-213ENST00000524563 KNDC1Q76NI1 1749 aa9.78□□□□□ -0.84
NUP98-213ENST00000524563 BRINP3Q76B58 766 aa9.77□□□□□ -0.85
NUP98-213ENST00000524563 PTCH1Q13635 1447 aa9.76□□□□□ -0.85
NUP98-213ENST00000524563 LAMC1P11047 1609 aa9.76□□□□□ -0.85
NUP98-213ENST00000524563 HRCP23327 699 aa9.76□□□□□ -0.85
NUP98-213ENST00000524563 AFF2P51816 1311 aa9.76□□□□□ -0.85
NUP98-213ENST00000524563 METP08581 1390 aa9.75□□□□□ -0.85
NUP98-213ENST00000524563 CDC42BPGQ6DT37 1551 aa9.75□□□□□ -0.85
NUP98-213ENST00000524563 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
NUP98-213ENST00000524563 KIF1AQ12756 1690 aa9.75□□□□□ -0.85
NUP98-213ENST00000524563 CDK12Q9NYV4 1490 aaPredicted RBP9.75□□□□□ -0.85
NUP98-213ENST00000524563 RGPD8O14715 1765 aaPredicted RBP9.74□□□□□ -0.85
NUP98-213ENST00000524563 RXRBP28702 533 aa9.74□□□□□ -0.85
NUP98-213ENST00000524563 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
NUP98-213ENST00000524563 COL22A1Q8NFW1 1626 aaPredicted RBP9.74□□□□□ -0.85
NUP98-213ENST00000524563 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
NUP98-213ENST00000524563 RGS12O14924 1447 aa9.73□□□□□ -0.85
NUP98-213ENST00000524563 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
NUP98-213ENST00000524563 RAB3GAP2Q9H2M9 1393 aa9.73□□□□□ -0.85
NUP98-213ENST00000524563 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
NUP98-213ENST00000524563 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.72□□□□□ -0.85
NUP98-213ENST00000524563 ADAMTS2O95450 1211 aa9.71□□□□□ -0.86
NUP98-213ENST00000524563 LRRC59Q96AG4 307 aaKnown RBP9.71□□□□□ -0.86
NUP98-213ENST00000524563 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.86
NUP98-213ENST00000524563 ABCA3Q99758 1704 aa9.7□□□□□ -0.86
NUP98-213ENST00000524563 DDX17Q92841 729 aaKnown RBP9.7□□□□□ -0.86
NUP98-213ENST00000524563 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms