RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
CTR9-202ENST00000524523 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
CTR9-202ENST00000524523 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
CTR9-202ENST00000524523 ABCC5O15440 1437 aa10.92□□□□□ -0.66
CTR9-202ENST00000524523 DAPK1P53355 1430 aa10.92□□□□□ -0.66
CTR9-202ENST00000524523 KIF14Q15058 1648 aa10.91□□□□□ -0.66
CTR9-202ENST00000524523 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
CTR9-202ENST00000524523 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
CTR9-202ENST00000524523 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
CTR9-202ENST00000524523 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
CTR9-202ENST00000524523 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.66
CTR9-202ENST00000524523 POTEMA6NI47 508 aa10.89□□□□□ -0.67
CTR9-202ENST00000524523 SLC34A2O95436 690 aa10.89□□□□□ -0.67
CTR9-202ENST00000524523 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
CTR9-202ENST00000524523 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
CTR9-202ENST00000524523 SHANK2Q9UPX8 1470 aa10.88□□□□□ -0.67
CTR9-202ENST00000524523 HOXB1P14653 301 aaPredicted RBP10.88□□□□□ -0.67
CTR9-202ENST00000524523 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
CTR9-202ENST00000524523 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
CTR9-202ENST00000524523 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
CTR9-202ENST00000524523 NCOA1Q15788 1441 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 ARID3CA6NKF2 412 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 ANKRD30AQ9BXX3 1397 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
CTR9-202ENST00000524523 EMP3P54852 163 aa10.86□□□□□ -0.67
CTR9-202ENST00000524523 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
CTR9-202ENST00000524523 MFSD10Q14728 455 aa10.86□□□□□ -0.67
CTR9-202ENST00000524523 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
CTR9-202ENST00000524523 GPR153Q6NV75 609 aa10.85□□□□□ -0.67
CTR9-202ENST00000524523 ARHGEF5Q12774 1597 aa10.85□□□□□ -0.67
CTR9-202ENST00000524523 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
CTR9-202ENST00000524523 ZNF644Q9H582 1327 aaPredicted RBP10.84□□□□□ -0.67
CTR9-202ENST00000524523 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
CTR9-202ENST00000524523 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
CTR9-202ENST00000524523 PLCH2O75038 1416 aa10.84□□□□□ -0.67
CTR9-202ENST00000524523 TBC1D12O60347 775 aa10.83□□□□□ -0.68
CTR9-202ENST00000524523 EFCAB2Q5VUJ9 269 aa10.83□□□□□ -0.68
CTR9-202ENST00000524523 RRP7BPQ9NSQ0 103 aa10.83□□□□□ -0.68
CTR9-202ENST00000524523 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
CTR9-202ENST00000524523 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
CTR9-202ENST00000524523 MBD5Q9P267 1494 aa10.82□□□□□ -0.68
CTR9-202ENST00000524523 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
CTR9-202ENST00000524523 CHIC2Q9UKJ5 165 aa10.82□□□□□ -0.68
CTR9-202ENST00000524523 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
CTR9-202ENST00000524523 MPHOSPH9Q99550 1183 aa10.81□□□□□ -0.68
CTR9-202ENST00000524523 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
CTR9-202ENST00000524523 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
CTR9-202ENST00000524523 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
CTR9-202ENST00000524523 CDC42BPAQ5VT25 1732 aa10.8□□□□□ -0.68
CTR9-202ENST00000524523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.79□□□□□ -0.68
CTR9-202ENST00000524523 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
CTR9-202ENST00000524523 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
CTR9-202ENST00000524523 CCDC141Q6ZP82 1450 aa10.79□□□□□ -0.68
CTR9-202ENST00000524523 C9orf84Q5VXU9 1444 aa10.78□□□□□ -0.68
CTR9-202ENST00000524523 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
CTR9-202ENST00000524523 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
CTR9-202ENST00000524523 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
CTR9-202ENST00000524523 TRIM52Q96A61 297 aa10.78□□□□□ -0.68
CTR9-202ENST00000524523 ERBB3P21860 1342 aa10.78□□□□□ -0.68
CTR9-202ENST00000524523 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
CTR9-202ENST00000524523 NUDT7P0C024 238 aa10.77□□□□□ -0.69
CTR9-202ENST00000524523 OXER1Q8TDS5 423 aa10.77□□□□□ -0.69
CTR9-202ENST00000524523 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTR9-202ENST00000524523 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
CTR9-202ENST00000524523 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
CTR9-202ENST00000524523 RTEL1-TNFRSF6BF6WH68 1400 aa10.76□□□□□ -0.69
CTR9-202ENST00000524523 TONSLQ96HA7 1378 aa10.76□□□□□ -0.69
CTR9-202ENST00000524523 ANKRD30BQ9BXX2 1392 aa10.76□□□□□ -0.69
CTR9-202ENST00000524523 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
CTR9-202ENST00000524523 ADGBQ8N7X0 1667 aa10.76□□□□□ -0.69
CTR9-202ENST00000524523 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTR9-202ENST00000524523 SIN3AQ96ST3 1273 aa10.75□□□□□ -0.69
CTR9-202ENST00000524523 ARHGAP5Q13017 1502 aa10.74□□□□□ -0.69
CTR9-202ENST00000524523 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
CTR9-202ENST00000524523 PCDH10Q9P2E7 1040 aa10.74□□□□□ -0.69
CTR9-202ENST00000524523 KDM5DQ9BY66 1539 aa10.74□□□□□ -0.69
CTR9-202ENST00000524523 CDC42BPBQ9Y5S2 1711 aa10.73□□□□□ -0.69
CTR9-202ENST00000524523 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
CTR9-202ENST00000524523 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
CTR9-202ENST00000524523 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
CTR9-202ENST00000524523 DENND4BO75064 1496 aaPredicted RBP10.73□□□□□ -0.69
CTR9-202ENST00000524523 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
CTR9-202ENST00000524523 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
CTR9-202ENST00000524523 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
CTR9-202ENST00000524523 CAMK2BQ13554 666 aa10.72□□□□□ -0.69
CTR9-202ENST00000524523 MYO5CQ9NQX4 1742 aa10.72□□□□□ -0.69
CTR9-202ENST00000524523 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
CTR9-202ENST00000524523 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.69
CTR9-202ENST00000524523 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
CTR9-202ENST00000524523 CDAN1Q8IWY9 1227 aa10.71□□□□□ -0.69
CTR9-202ENST00000524523 ABCA9Q8IUA7 1624 aa10.7□□□□□ -0.7
CTR9-202ENST00000524523 PZPP20742 1482 aa10.7□□□□□ -0.7
CTR9-202ENST00000524523 ASXL2Q76L83 1435 aa10.7□□□□□ -0.7
CTR9-202ENST00000524523 E2F4Q16254 413 aa10.7□□□□□ -0.7
CTR9-202ENST00000524523 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
CTR9-202ENST00000524523 PLXNC1O60486 1568 aa10.69□□□□□ -0.7
CTR9-202ENST00000524523 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
CTR9-202ENST00000524523 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms