RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-214ENST00000524177 LMOD2Q6P5Q4 547 aa7.36□□□□□ -1.23
CSMD1-214ENST00000524177 ZPR1O75312 459 aa7.35□□□□□ -1.23
CSMD1-214ENST00000524177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSMD1-214ENST00000524177 ARHGEF1Q92888 912 aaKnown RBP7.34□□□□□ -1.23
CSMD1-214ENST00000524177 TMUB1Q9BVT8 246 aa7.33□□□□□ -1.24
CSMD1-214ENST00000524177 PCDHB3Q9Y5E6 796 aa7.33□□□□□ -1.24
CSMD1-214ENST00000524177 SLC4A3P48751 1232 aa7.32□□□□□ -1.24
CSMD1-214ENST00000524177 EYA1Q99502 592 aa7.32□□□□□ -1.24
CSMD1-214ENST00000524177 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
CSMD1-214ENST00000524177 TLL1O43897 1013 aa7.31□□□□□ -1.24
CSMD1-214ENST00000524177 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CSMD1-214ENST00000524177 TRIM67Q6ZTA4 783 aa7.31□□□□□ -1.24
CSMD1-214ENST00000524177 EMID1Q96A84 441 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-214ENST00000524177 ZNF775Q96BV0 537 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-214ENST00000524177 SLC19A1P41440 591 aa7.3□□□□□ -1.24
CSMD1-214ENST00000524177 PRR14Q9BWN1 585 aa7.3□□□□□ -1.24
CSMD1-214ENST00000524177 TESPA1A2RU30 521 aaPredicted RBP7.29□□□□□ -1.24
CSMD1-214ENST00000524177 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-214ENST00000524177 SEMA3EO15041 775 aa7.28□□□□□ -1.24
CSMD1-214ENST00000524177 MLLT3P42568 568 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-214ENST00000524177 PKDCCQ504Y2 493 aa7.27□□□□□ -1.25
CSMD1-214ENST00000524177 SPRYD7Q5W111 196 aa7.27□□□□□ -1.25
CSMD1-214ENST00000524177 DNAJB2P25686 324 aa7.26□□□□□ -1.25
CSMD1-214ENST00000524177 S1PR4O95977 384 aa7.25□□□□□ -1.25
CSMD1-214ENST00000524177 MYT1Q01538 1121 aa7.25□□□□□ -1.25
CSMD1-214ENST00000524177 ZNF598Q86UK7 904 aaKnown RBP7.25□□□□□ -1.25
CSMD1-214ENST00000524177 ANKLE1Q8NAG6 615 aa7.25□□□□□ -1.25
CSMD1-214ENST00000524177 ZC3H15Q8WU90 426 aaKnown RBP7.25□□□□□ -1.25
CSMD1-214ENST00000524177 TULP1O00294 542 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-214ENST00000524177 PTGDRQ13258 359 aa7.24□□□□□ -1.25
CSMD1-214ENST00000524177 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
CSMD1-214ENST00000524177 LIAT1Q6ZQX7 453 aa7.24□□□□□ -1.25
CSMD1-214ENST00000524177 TMEM134Q9H6X4 195 aa7.24□□□□□ -1.25
CSMD1-214ENST00000524177 TIMELESSQ9UNS1 1208 aa7.24□□□□□ -1.25
CSMD1-214ENST00000524177 POTECB2RU33 542 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 ACTN4O43707 911 aaKnown RBP7.23□□□□□ -1.25
CSMD1-214ENST00000524177 CFHP08603 1231 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 PRR20EP86478 221 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 PRR20CP86479 221 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 PRR20DP86480 221 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 PRR20BP86481 221 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 PRR20AP86496 221 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 FAM161AQ3B820 660 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 KMT5BQ4FZB7 885 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 ZNF697Q5TEC3 545 aa7.23□□□□□ -1.25
CSMD1-214ENST00000524177 RBM46Q8TBY0 533 aaKnown RBP7.23□□□□□ -1.25
CSMD1-214ENST00000524177 FAM187AA6NFU0 413 aa7.22□□□□□ -1.25
CSMD1-214ENST00000524177 TNFRSF10AO00220 468 aa7.22□□□□□ -1.25
CSMD1-214ENST00000524177 DGAT1O75907 488 aa7.22□□□□□ -1.25
CSMD1-214ENST00000524177 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
CSMD1-214ENST00000524177 RCCD1A6NED2 376 aa7.21□□□□□ -1.26
CSMD1-214ENST00000524177 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
CSMD1-214ENST00000524177 GTF3C3Q9Y5Q9 886 aa7.21□□□□□ -1.26
CSMD1-214ENST00000524177 GDF9O60383 454 aa7.2□□□□□ -1.26
CSMD1-214ENST00000524177 ADH1BP00325 375 aa7.2□□□□□ -1.26
CSMD1-214ENST00000524177 SLC10A3P09131 477 aa7.19□□□□□ -1.26
CSMD1-214ENST00000524177 PLA2G2CQ5R387 149 aa7.19□□□□□ -1.26
CSMD1-214ENST00000524177 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
CSMD1-214ENST00000524177 SLC6A16Q9GZN6 736 aa7.18□□□□□ -1.26
CSMD1-214ENST00000524177 SLC24A3Q9HC58 644 aa7.18□□□□□ -1.26
CSMD1-214ENST00000524177 ST8SIA5O15466 376 aa7.17□□□□□ -1.26
CSMD1-214ENST00000524177 NR1I2O75469 434 aa7.17□□□□□ -1.26
CSMD1-214ENST00000524177 ZMYND10O75800 440 aa7.16□□□□□ -1.26
CSMD1-214ENST00000524177 PUS10Q3MIT2 529 aaKnown RBP7.15□□□□□ -1.26
CSMD1-214ENST00000524177 SMYD5Q6GMV2 418 aa7.15□□□□□ -1.26
CSMD1-214ENST00000524177 SCUBE3Q8IX30 993 aa7.15□□□□□ -1.26
CSMD1-214ENST00000524177 AAASQ9NRG9 546 aa7.15□□□□□ -1.26
CSMD1-214ENST00000524177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.14□□□□□ -1.27
CSMD1-214ENST00000524177 FOXC1Q12948 553 aa7.14□□□□□ -1.27
CSMD1-214ENST00000524177 SPSB2Q99619 263 aa7.13□□□□□ -1.27
CSMD1-214ENST00000524177 PKD2L1Q9P0L9 805 aa7.13□□□□□ -1.27
CSMD1-214ENST00000524177 FCHSD2O94868 740 aa7.12□□□□□ -1.27
CSMD1-214ENST00000524177 NEUROD2Q15784 382 aa7.12□□□□□ -1.27
CSMD1-214ENST00000524177 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
CSMD1-214ENST00000524177 BARGINQ6ZT62 677 aa7.12□□□□□ -1.27
CSMD1-214ENST00000524177 PXYLP1Q8TE99 480 aa7.11□□□□□ -1.27
CSMD1-214ENST00000524177 TREML4Q6UXN2 200 aa7.1□□□□□ -1.27
CSMD1-214ENST00000524177 GPIHBP1Q8IV16 184 aa7.1□□□□□ -1.27
CSMD1-214ENST00000524177 DACH1Q9UI36 760 aa7.1□□□□□ -1.27
CSMD1-214ENST00000524177 OATP04181 439 aa7.09□□□□□ -1.27
CSMD1-214ENST00000524177 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-214ENST00000524177 RSPH4AQ5TD94 716 aa7.08□□□□□ -1.28
CSMD1-214ENST00000524177 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
CSMD1-214ENST00000524177 FCF1Q9Y324 198 aaKnown RBP7.08□□□□□ -1.28
CSMD1-214ENST00000524177 RPIAP49247 311 aa7.07□□□□□ -1.28
CSMD1-214ENST00000524177 RDH13Q8NBN7 331 aa7.07□□□□□ -1.28
CSMD1-214ENST00000524177 GPR37O15354 613 aa7.06□□□□□ -1.28
CSMD1-214ENST00000524177 MORN1Q5T089 497 aa7.06□□□□□ -1.28
CSMD1-214ENST00000524177 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
CSMD1-214ENST00000524177 TOR4AQ9NXH8 423 aa7.06□□□□□ -1.28
CSMD1-214ENST00000524177 GMPR2Q9P2T1 348 aaKnown RBP7.06□□□□□ -1.28
CSMD1-214ENST00000524177 AXIN1O15169 862 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 AVPP01185 164 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 FUT2Q10981 343 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 CYP4X1Q8N118 509 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 THAP11Q96EK4 314 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
CSMD1-214ENST00000524177 DDX11L8A8MPP1 907 aa7.04□□□□□ -1.28
CSMD1-214ENST00000524177 CD2BP2O95400 341 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms