RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 PADI6Q6TGC4 694 aa8.87□□□□□ -0.99
SPIDR-226ENST00000524157 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
SPIDR-226ENST00000524157 FBXO31Q5XUX0 539 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-226ENST00000524157 JPH4Q96JJ6 628 aa8.86□□□□□ -0.99
SPIDR-226ENST00000524157 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
SPIDR-226ENST00000524157 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
SPIDR-226ENST00000524157 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
SPIDR-226ENST00000524157 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
SPIDR-226ENST00000524157 KDM4FA0A1W2PPD8 638 aa8.84□□□□□ -0.99
SPIDR-226ENST00000524157 E9PSI1 815 aa8.84□□□□□ -0.99
SPIDR-226ENST00000524157 SPTLC1O15269 473 aa8.84□□□□□ -0.99
SPIDR-226ENST00000524157 RBM46Q8TBY0 533 aaKnown RBP8.84□□□□□ -0.99
SPIDR-226ENST00000524157 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
SPIDR-226ENST00000524157 GJA5P36382 358 aa8.83□□□□□ -1
SPIDR-226ENST00000524157 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
SPIDR-226ENST00000524157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
SPIDR-226ENST00000524157 POTEIP0CG38 1075 aa8.82□□□□□ -1
SPIDR-226ENST00000524157 RSBN1LQ6PCB5 846 aaPredicted RBP8.82□□□□□ -1
SPIDR-226ENST00000524157 TTC13Q8NBP0 860 aa8.82□□□□□ -1
SPIDR-226ENST00000524157 AP1G2O75843 785 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 WASHC4Q2M389 1173 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 POTEHQ6S545 545 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 NUTM1Q86Y26 1132 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
SPIDR-226ENST00000524157 FOSBP53539 338 aa8.8□□□□□ -1
SPIDR-226ENST00000524157 SULF1Q8IWU6 871 aa8.8□□□□□ -1
SPIDR-226ENST00000524157 ZNF710Q8N1W2 664 aa8.8□□□□□ -1
SPIDR-226ENST00000524157 ZNF428Q96B54 188 aa8.8□□□□□ -1
SPIDR-226ENST00000524157 LILRB3O75022 631 aa8.79□□□□□ -1
SPIDR-226ENST00000524157 USP17L8P0C7I0 530 aa8.79□□□□□ -1
SPIDR-226ENST00000524157 CD46P15529 392 aa8.79□□□□□ -1
SPIDR-226ENST00000524157 DOK7Q18PE1 504 aa8.79□□□□□ -1
SPIDR-226ENST00000524157 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
SPIDR-226ENST00000524157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.78□□□□□ -1
SPIDR-226ENST00000524157 RIMBP2O15034 1052 aa8.78□□□□□ -1
SPIDR-226ENST00000524157 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
SPIDR-226ENST00000524157 CCDC27Q2M243 656 aa8.78□□□□□ -1
SPIDR-226ENST00000524157 C6orf132Q5T0Z8 1188 aa8.78□□□□□ -1
SPIDR-226ENST00000524157 RFX1P22670 979 aa8.77□□□□□ -1.01
SPIDR-226ENST00000524157 CFAP70Q5T0N1 1121 aa8.77□□□□□ -1.01
SPIDR-226ENST00000524157 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-226ENST00000524157 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
SPIDR-226ENST00000524157 SHROOM4Q9ULL8 1493 aa8.77□□□□□ -1.01
SPIDR-226ENST00000524157 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
SPIDR-226ENST00000524157 PRSS12P56730 875 aa8.76□□□□□ -1.01
SPIDR-226ENST00000524157 QPCTQ16769 361 aa8.76□□□□□ -1.01
SPIDR-226ENST00000524157 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
SPIDR-226ENST00000524157 MOXD2PA6NHM9 499 aa8.75□□□□□ -1.01
SPIDR-226ENST00000524157 NUTM2BA6NNL0 878 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 NUTM2EB1AL46 878 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 SRPK2P78362 688 aaKnown RBP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 NUTM2DQ5VT03 806 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 SND1Q7KZF4 910 aaKnown RBP eCLIP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 NUTM2AQ8IVF1 878 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-226ENST00000524157 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
SPIDR-226ENST00000524157 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
SPIDR-226ENST00000524157 IGSF3O75054 1194 aa8.74□□□□□ -1.01
SPIDR-226ENST00000524157 ADAMTS19Q8TE59 1207 aa8.74□□□□□ -1.01
SPIDR-226ENST00000524157 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
SPIDR-226ENST00000524157 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
SPIDR-226ENST00000524157 RTL5Q5HYW3 569 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-226ENST00000524157 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
SPIDR-226ENST00000524157 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-226ENST00000524157 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
SPIDR-226ENST00000524157 ZBTB3Q9H5J0 574 aa8.72□□□□□ -1.01
SPIDR-226ENST00000524157 DDX11L8A8MPP1 907 aa8.71□□□□□ -1.02
SPIDR-226ENST00000524157 NDUFV2P19404 249 aa8.71□□□□□ -1.02
SPIDR-226ENST00000524157 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
SPIDR-226ENST00000524157 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-226ENST00000524157 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
SPIDR-226ENST00000524157 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
SPIDR-226ENST00000524157 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
SPIDR-226ENST00000524157 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
SPIDR-226ENST00000524157 ATG7O95352 703 aa8.69□□□□□ -1.02
SPIDR-226ENST00000524157 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-226ENST00000524157 SOX11P35716 441 aa8.69□□□□□ -1.02
SPIDR-226ENST00000524157 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-226ENST00000524157 DNAJB2P25686 324 aa8.68□□□□□ -1.02
SPIDR-226ENST00000524157 GPR153Q6NV75 609 aa8.68□□□□□ -1.02
SPIDR-226ENST00000524157 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
SPIDR-226ENST00000524157 EYA1Q99502 592 aa8.68□□□□□ -1.02
SPIDR-226ENST00000524157 ALG2Q9H553 416 aa8.68□□□□□ -1.02
SPIDR-226ENST00000524157 USP46P62068 366 aa8.67□□□□□ -1.02
SPIDR-226ENST00000524157 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
SPIDR-226ENST00000524157 TMEM88BA6NKF7 163 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 SNPHO15079 494 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 KDM4AO75164 1064 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 NUDT7P0C024 238 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-226ENST00000524157 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
SPIDR-226ENST00000524157 GNEQ9Y223 722 aaKnown RBP8.66□□□□□ -1.02
SPIDR-226ENST00000524157 GPR37L1O60883 481 aa8.65□□□□□ -1.02
SPIDR-226ENST00000524157 ARSIQ5FYB1 569 aa8.65□□□□□ -1.02
SPIDR-226ENST00000524157 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
SPIDR-226ENST00000524157 CARNS1A5YM72 827 aa8.64□□□□□ -1.03
SPIDR-226ENST00000524157 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms