RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 NBR1Q14596 966 aa6.04□□□□□ -1.44
LINC01339-204ENST00000524094 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.04□□□□□ -1.44
LINC01339-204ENST00000524094 AVPP01185 164 aa6.03□□□□□ -1.44
LINC01339-204ENST00000524094 OXER1Q8TDS5 423 aa6.03□□□□□ -1.44
LINC01339-204ENST00000524094 RASSF7Q02833 373 aa6.02□□□□□ -1.45
LINC01339-204ENST00000524094 ONECUT3O60422 494 aaPredicted RBP6.01□□□□□ -1.45
LINC01339-204ENST00000524094 CTC1Q2NKJ3 1217 aa6.01□□□□□ -1.45
LINC01339-204ENST00000524094 UPF1Q92900 1129 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC01339-204ENST00000524094 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
LINC01339-204ENST00000524094 RNF223E7ERA6 249 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 DSG2Q14126 1118 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 MFSD10Q14728 455 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 GPAT2Q6NUI2 795 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 IRF7Q92985 503 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 CRISPLD2Q9H0B8 497 aa5.99□□□□□ -1.45
LINC01339-204ENST00000524094 SMCPP49901 116 aaPredicted RBP5.98□□□□□ -1.45
LINC01339-204ENST00000524094 LIAT1Q6ZQX7 453 aa5.98□□□□□ -1.45
LINC01339-204ENST00000524094 IGHA1P01876 353 aa5.97□□□□□ -1.45
LINC01339-204ENST00000524094 ARHGEF1Q92888 912 aaKnown RBP5.97□□□□□ -1.45
LINC01339-204ENST00000524094 TRIM47Q96LD4 638 aa5.97□□□□□ -1.45
LINC01339-204ENST00000524094 CAMK2BQ13554 666 aa5.96□□□□□ -1.46
LINC01339-204ENST00000524094 GPHNQ9NQX3 736 aaPredicted RBP5.96□□□□□ -1.46
LINC01339-204ENST00000524094 TESPA1A2RU30 521 aaPredicted RBP5.95□□□□□ -1.46
LINC01339-204ENST00000524094 SEMA3EO15041 775 aa5.95□□□□□ -1.46
LINC01339-204ENST00000524094 E2F4Q16254 413 aa5.95□□□□□ -1.46
LINC01339-204ENST00000524094 P3H3Q8IVL6 736 aa5.95□□□□□ -1.46
LINC01339-204ENST00000524094 SENP2Q9HC62 589 aa5.95□□□□□ -1.46
LINC01339-204ENST00000524094 ATP13A2Q9NQ11 1180 aa5.95□□□□□ -1.46
LINC01339-204ENST00000524094 NXF1Q9UBU9 619 aaKnown RBP5.95□□□□□ -1.46
LINC01339-204ENST00000524094 ARIH1Q9Y4X5 557 aaPredicted RBP5.95□□□□□ -1.46
LINC01339-204ENST00000524094 LMOD2Q6P5Q4 547 aa5.94□□□□□ -1.46
LINC01339-204ENST00000524094 WDR70Q9NW82 654 aa5.94□□□□□ -1.46
LINC01339-204ENST00000524094 ADAM23O75077 832 aa5.93□□□□□ -1.46
LINC01339-204ENST00000524094 LARP6Q9BRS8 491 aaKnown RBP5.93□□□□□ -1.46
LINC01339-204ENST00000524094 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
LINC01339-204ENST00000524094 TRIM6-TRIM34B2RNG4 842 aa5.91□□□□□ -1.46
LINC01339-204ENST00000524094 COPS2P61201 443 aa5.91□□□□□ -1.46
LINC01339-204ENST00000524094 FOXC1Q12948 553 aa5.91□□□□□ -1.46
LINC01339-204ENST00000524094 ANKLE1Q8NAG6 615 aa5.91□□□□□ -1.46
LINC01339-204ENST00000524094 ZC3H15Q8WU90 426 aaKnown RBP5.91□□□□□ -1.46
LINC01339-204ENST00000524094 PKD2L1Q9P0L9 805 aa5.91□□□□□ -1.46
LINC01339-204ENST00000524094 PDE4AP27815 886 aa5.9□□□□□ -1.46
LINC01339-204ENST00000524094 APLP1P51693 650 aa5.9□□□□□ -1.46
LINC01339-204ENST00000524094 Q8N3U1 123 aa5.9□□□□□ -1.46
LINC01339-204ENST00000524094 SAMD7Q7Z3H4 446 aa5.89□□□□□ -1.47
LINC01339-204ENST00000524094 NPAS3Q8IXF0 933 aa5.89□□□□□ -1.47
LINC01339-204ENST00000524094 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
LINC01339-204ENST00000524094 RNF225M0QZC1 329 aaPredicted RBP5.88□□□□□ -1.47
LINC01339-204ENST00000524094 EVI5O60447 810 aa5.88□□□□□ -1.47
LINC01339-204ENST00000524094 ZPR1O75312 459 aa5.88□□□□□ -1.47
LINC01339-204ENST00000524094 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
LINC01339-204ENST00000524094 EMILIN3Q9NT22 766 aa5.88□□□□□ -1.47
LINC01339-204ENST00000524094 TOR4AQ9NXH8 423 aa5.88□□□□□ -1.47
LINC01339-204ENST00000524094 PPEF1O14829 653 aaPredicted RBP5.87□□□□□ -1.47
LINC01339-204ENST00000524094 DNMT3AQ9Y6K1 912 aaPredicted RBP5.87□□□□□ -1.47
LINC01339-204ENST00000524094 ZMYND10O75800 440 aa5.86□□□□□ -1.47
LINC01339-204ENST00000524094 MLLT3P42568 568 aaPredicted RBP5.86□□□□□ -1.47
LINC01339-204ENST00000524094 VEGFBP49765 207 aa5.86□□□□□ -1.47
LINC01339-204ENST00000524094 BRPF1P55201 1214 aaPredicted RBP5.86□□□□□ -1.47
LINC01339-204ENST00000524094 PCDHGA10Q9Y5H3 936 aa5.86□□□□□ -1.47
LINC01339-204ENST00000524094 H3BM21 787 aa5.85□□□□□ -1.47
LINC01339-204ENST00000524094 DDX27Q96GQ7 796 aaKnown RBP5.85□□□□□ -1.47
LINC01339-204ENST00000524094 FOXK2Q01167 660 aa5.84□□□□□ -1.47
LINC01339-204ENST00000524094 CYP4X1Q8N118 509 aa5.84□□□□□ -1.47
LINC01339-204ENST00000524094 SLC24A3Q9HC58 644 aa5.83□□□□□ -1.48
LINC01339-204ENST00000524094 TMEM132AQ24JP5 1023 aa5.82□□□□□ -1.48
LINC01339-204ENST00000524094 BARGINQ6ZT62 677 aa5.82□□□□□ -1.48
LINC01339-204ENST00000524094 TIMELESSQ9UNS1 1208 aa5.82□□□□□ -1.48
LINC01339-204ENST00000524094 PPP1R15BQ5SWA1 713 aa5.81□□□□□ -1.48
LINC01339-204ENST00000524094 RBM26Q5T8P6 1007 aaKnown RBP5.81□□□□□ -1.48
LINC01339-204ENST00000524094 FBXW7Q969H0 707 aa5.81□□□□□ -1.48
LINC01339-204ENST00000524094 GTF3C3Q9Y5Q9 886 aa5.81□□□□□ -1.48
LINC01339-204ENST00000524094 GPR37O15354 613 aa5.8□□□□□ -1.48
LINC01339-204ENST00000524094 TYW1BQ6NUM6 668 aa5.8□□□□□ -1.48
LINC01339-204ENST00000524094 RNF40O75150 1001 aa5.79□□□□□ -1.48
LINC01339-204ENST00000524094 PACS2Q86VP3 889 aa5.79□□□□□ -1.48
LINC01339-204ENST00000524094 DPYSL4O14531 572 aa5.78□□□□□ -1.48
LINC01339-204ENST00000524094 S1PR4O95977 384 aa5.78□□□□□ -1.48
LINC01339-204ENST00000524094 C6orf132Q5T0Z8 1188 aa5.78□□□□□ -1.48
LINC01339-204ENST00000524094 PRIM1P49642 420 aaKnown RBP5.77□□□□□ -1.49
LINC01339-204ENST00000524094 PDIA6Q15084 440 aa5.77□□□□□ -1.49
LINC01339-204ENST00000524094 PLA2G2CQ5R387 149 aa5.77□□□□□ -1.49
LINC01339-204ENST00000524094 ADAMTS8Q9UP79 889 aa5.77□□□□□ -1.49
LINC01339-204ENST00000524094 TULP1O00294 542 aaPredicted RBP5.76□□□□□ -1.49
LINC01339-204ENST00000524094 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
LINC01339-204ENST00000524094 SMAPO00193 183 aa5.75□□□□□ -1.49
LINC01339-204ENST00000524094 TSKSQ9UJT2 592 aa5.75□□□□□ -1.49
LINC01339-204ENST00000524094 TTC24A2A3L6 582 aaPredicted RBP5.74□□□□□ -1.49
LINC01339-204ENST00000524094 TLL1O43897 1013 aa5.74□□□□□ -1.49
LINC01339-204ENST00000524094 IRS1P35568 1242 aa5.74□□□□□ -1.49
LINC01339-204ENST00000524094 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
LINC01339-204ENST00000524094 SPDYE16A6NNV3 312 aaPredicted RBP5.73□□□□□ -1.49
LINC01339-204ENST00000524094 PHF14O94880 888 aa5.73□□□□□ -1.49
LINC01339-204ENST00000524094 OSBPP22059 807 aa5.73□□□□□ -1.49
LINC01339-204ENST00000524094 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
LINC01339-204ENST00000524094 MSTNO14793 375 aa5.71□□□□□ -1.5
LINC01339-204ENST00000524094 TRIM66O15016 1216 aa5.71□□□□□ -1.5
LINC01339-204ENST00000524094 NECTIN2Q92692 538 aa5.71□□□□□ -1.5
LINC01339-204ENST00000524094 SMPD1P17405 629 aa5.7□□□□□ -1.5
LINC01339-204ENST00000524094 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms