RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 NOS1P29475 1434 aa18.05■□□□□ 0.48
CCNC-218ENST00000524049 PTPN23Q9H3S7 1636 aa18.04■□□□□ 0.48
CCNC-218ENST00000524049 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
CCNC-218ENST00000524049 SLAIN2Q9P270 581 aa18.03■□□□□ 0.48
CCNC-218ENST00000524049 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
CCNC-218ENST00000524049 CHIC2Q9UKJ5 165 aa18.02■□□□□ 0.48
CCNC-218ENST00000524049 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
CCNC-218ENST00000524049 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
CCNC-218ENST00000524049 JCADQ9P266 1359 aa18■□□□□ 0.47
CCNC-218ENST00000524049 NCOA3Q9Y6Q9 1424 aa17.99■□□□□ 0.47
CCNC-218ENST00000524049 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
CCNC-218ENST00000524049 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
CCNC-218ENST00000524049 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
CCNC-218ENST00000524049 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
CCNC-218ENST00000524049 RPRD2Q5VT52 1461 aaKnown RBP17.98■□□□□ 0.47
CCNC-218ENST00000524049 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
CCNC-218ENST00000524049 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCNC-218ENST00000524049 TBX22Q9Y458 520 aa17.97■□□□□ 0.47
CCNC-218ENST00000524049 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
CCNC-218ENST00000524049 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
CCNC-218ENST00000524049 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
CCNC-218ENST00000524049 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
CCNC-218ENST00000524049 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
CCNC-218ENST00000524049 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
CCNC-218ENST00000524049 CACNB1Q02641 598 aaPredicted RBP17.93■□□□□ 0.46
CCNC-218ENST00000524049 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
CCNC-218ENST00000524049 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
CCNC-218ENST00000524049 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
CCNC-218ENST00000524049 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
CCNC-218ENST00000524049 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
CCNC-218ENST00000524049 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
CCNC-218ENST00000524049 C19orf44Q9H6X5 657 aa17.9■□□□□ 0.46
CCNC-218ENST00000524049 ATF3P18847 181 aa17.89■□□□□ 0.45
CCNC-218ENST00000524049 CHGAP10645 457 aaKnown RBP17.88■□□□□ 0.45
CCNC-218ENST00000524049 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
CCNC-218ENST00000524049 MEX3CQ5U5Q3 659 aaKnown RBP17.88■□□□□ 0.45
CCNC-218ENST00000524049 PHLPP1O60346 1717 aa17.88■□□□□ 0.45
CCNC-218ENST00000524049 CHD2O14647 1828 aaKnown RBP17.84■□□□□ 0.45
CCNC-218ENST00000524049 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.45
CCNC-218ENST00000524049 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
CCNC-218ENST00000524049 COL16A1Q07092 1604 aaPredicted RBP17.83■□□□□ 0.44
CCNC-218ENST00000524049 DIP2AQ14689 1571 aa17.83■□□□□ 0.44
CCNC-218ENST00000524049 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
CCNC-218ENST00000524049 UPF1Q92900 1129 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCNC-218ENST00000524049 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
CCNC-218ENST00000524049 RXRBP28702 533 aa17.8■□□□□ 0.44
CCNC-218ENST00000524049 LRP6O75581 1613 aa17.8■□□□□ 0.44
CCNC-218ENST00000524049 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
CCNC-218ENST00000524049 BRINP3Q76B58 766 aa17.79■□□□□ 0.44
CCNC-218ENST00000524049 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
CCNC-218ENST00000524049 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
CCNC-218ENST00000524049 GCC2Q8IWJ2 1684 aa17.78■□□□□ 0.44
CCNC-218ENST00000524049 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
CCNC-218ENST00000524049 DCCP43146 1447 aa17.78■□□□□ 0.44
CCNC-218ENST00000524049 TRPM2O94759 1503 aa17.77■□□□□ 0.43
CCNC-218ENST00000524049 UNC13BO14795 1591 aa17.75■□□□□ 0.43
CCNC-218ENST00000524049 LRRC59Q96AG4 307 aaKnown RBP17.75■□□□□ 0.43
CCNC-218ENST00000524049 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
CCNC-218ENST00000524049 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
CCNC-218ENST00000524049 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
CCNC-218ENST00000524049 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
CCNC-218ENST00000524049 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
CCNC-218ENST00000524049 NUP155O75694 1391 aa17.74■□□□□ 0.43
CCNC-218ENST00000524049 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
CCNC-218ENST00000524049 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
CCNC-218ENST00000524049 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
CCNC-218ENST00000524049 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
CCNC-218ENST00000524049 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
CCNC-218ENST00000524049 AFF2P51816 1311 aa17.71■□□□□ 0.42
CCNC-218ENST00000524049 E9PCH4 1651 aa17.7■□□□□ 0.42
CCNC-218ENST00000524049 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
CCNC-218ENST00000524049 ASXL1Q8IXJ9 1541 aa17.68■□□□□ 0.42
CCNC-218ENST00000524049 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
CCNC-218ENST00000524049 MST1RQ04912 1400 aa17.68■□□□□ 0.42
CCNC-218ENST00000524049 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
CCNC-218ENST00000524049 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
CCNC-218ENST00000524049 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
CCNC-218ENST00000524049 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
CCNC-218ENST00000524049 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
CCNC-218ENST00000524049 METP08581 1390 aa17.65■□□□□ 0.42
CCNC-218ENST00000524049 ADGRL3Q9HAR2 1447 aa17.64■□□□□ 0.41
CCNC-218ENST00000524049 NGLY1Q96IV0 654 aa17.63■□□□□ 0.41
CCNC-218ENST00000524049 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
CCNC-218ENST00000524049 XRN1Q8IZH2 1706 aaKnown RBP17.62■□□□□ 0.41
CCNC-218ENST00000524049 ITGAEP38570 1179 aa17.6■□□□□ 0.41
CCNC-218ENST00000524049 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
CCNC-218ENST00000524049 NRXN3Q9Y4C0 1643 aa17.59■□□□□ 0.41
CCNC-218ENST00000524049 RGS12O14924 1447 aa17.58■□□□□ 0.41
CCNC-218ENST00000524049 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
CCNC-218ENST00000524049 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
CCNC-218ENST00000524049 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
CCNC-218ENST00000524049 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
CCNC-218ENST00000524049 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
CCNC-218ENST00000524049 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
CCNC-218ENST00000524049 USP21Q9UK80 565 aa17.55■□□□□ 0.4
CCNC-218ENST00000524049 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
CCNC-218ENST00000524049 ATAD2Q6PL18 1390 aa17.54■□□□□ 0.4
CCNC-218ENST00000524049 RPGRIP1LQ68CZ1 1315 aa17.53■□□□□ 0.4
CCNC-218ENST00000524049 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
CCNC-218ENST00000524049 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms