RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
LINC01947-201ENST00000523742 PPEF1O14829 653 aaPredicted RBP11.11□□□□□ -0.63
LINC01947-201ENST00000523742 GDF9O60383 454 aa11.11□□□□□ -0.63
LINC01947-201ENST00000523742 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
LINC01947-201ENST00000523742 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
LINC01947-201ENST00000523742 WFS1O76024 890 aa11.09□□□□□ -0.63
LINC01947-201ENST00000523742 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
LINC01947-201ENST00000523742 STK17AQ9UEE5 414 aa11.09□□□□□ -0.63
LINC01947-201ENST00000523742 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
LINC01947-201ENST00000523742 LCE2CQ5TA81 110 aa11.08□□□□□ -0.64
LINC01947-201ENST00000523742 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
LINC01947-201ENST00000523742 TLL1O43897 1013 aa11.06□□□□□ -0.64
LINC01947-201ENST00000523742 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
LINC01947-201ENST00000523742 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
LINC01947-201ENST00000523742 SWT1Q5T5J6 900 aaKnown RBP11.05□□□□□ -0.64
LINC01947-201ENST00000523742 CECR2Q9BXF3 1484 aa11.02□□□□□ -0.65
LINC01947-201ENST00000523742 BLOC1S3Q6QNY0 202 aa11.02□□□□□ -0.65
LINC01947-201ENST00000523742 WIPF1O43516 503 aa11.01□□□□□ -0.65
LINC01947-201ENST00000523742 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
LINC01947-201ENST00000523742 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
LINC01947-201ENST00000523742 GMPR2Q9P2T1 348 aaKnown RBP11.01□□□□□ -0.65
LINC01947-201ENST00000523742 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
LINC01947-201ENST00000523742 S1PR4O95977 384 aa10.99□□□□□ -0.65
LINC01947-201ENST00000523742 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
LINC01947-201ENST00000523742 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
LINC01947-201ENST00000523742 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
LINC01947-201ENST00000523742 PDIA6Q15084 440 aa10.97□□□□□ -0.65
LINC01947-201ENST00000523742 EIF4G1Q04637 1599 aaKnown RBP10.97□□□□□ -0.65
LINC01947-201ENST00000523742 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
LINC01947-201ENST00000523742 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
LINC01947-201ENST00000523742 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
LINC01947-201ENST00000523742 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
LINC01947-201ENST00000523742 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
LINC01947-201ENST00000523742 INSM1Q01101 510 aaPredicted RBP10.93□□□□□ -0.66
LINC01947-201ENST00000523742 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
LINC01947-201ENST00000523742 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
LINC01947-201ENST00000523742 FOXC1Q12948 553 aa10.9□□□□□ -0.66
LINC01947-201ENST00000523742 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
LINC01947-201ENST00000523742 AVPP01185 164 aa10.88□□□□□ -0.67
LINC01947-201ENST00000523742 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
LINC01947-201ENST00000523742 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
LINC01947-201ENST00000523742 OSBPP22059 807 aa10.86□□□□□ -0.67
LINC01947-201ENST00000523742 EYA1Q99502 592 aa10.86□□□□□ -0.67
LINC01947-201ENST00000523742 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
LINC01947-201ENST00000523742 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
LINC01947-201ENST00000523742 AXIN1O15169 862 aa10.84□□□□□ -0.67
LINC01947-201ENST00000523742 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.68
LINC01947-201ENST00000523742 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
LINC01947-201ENST00000523742 PRR14Q9BWN1 585 aa10.82□□□□□ -0.68
LINC01947-201ENST00000523742 ADH1BP00325 375 aa10.81□□□□□ -0.68
LINC01947-201ENST00000523742 TERTO14746 1132 aaKnown RBP10.8□□□□□ -0.68
LINC01947-201ENST00000523742 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
LINC01947-201ENST00000523742 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
LINC01947-201ENST00000523742 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
LINC01947-201ENST00000523742 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
LINC01947-201ENST00000523742 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
LINC01947-201ENST00000523742 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
LINC01947-201ENST00000523742 SUZ12Q15022 739 aaKnown RBP10.75□□□□□ -0.69
LINC01947-201ENST00000523742 SLC4A3P48751 1232 aa10.74□□□□□ -0.69
LINC01947-201ENST00000523742 CFHP08603 1231 aa10.72□□□□□ -0.69
LINC01947-201ENST00000523742 CYP4X1Q8N118 509 aa10.72□□□□□ -0.69
LINC01947-201ENST00000523742 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
LINC01947-201ENST00000523742 SLC10A3P09131 477 aa10.68□□□□□ -0.7
LINC01947-201ENST00000523742 KMT5BQ4FZB7 885 aa10.68□□□□□ -0.7
LINC01947-201ENST00000523742 TRIM47Q96LD4 638 aa10.68□□□□□ -0.7
LINC01947-201ENST00000523742 RPIAP49247 311 aa10.67□□□□□ -0.7
LINC01947-201ENST00000523742 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
LINC01947-201ENST00000523742 TMEM134Q9H6X4 195 aa10.67□□□□□ -0.7
LINC01947-201ENST00000523742 NR1I2O75469 434 aa10.66□□□□□ -0.7
LINC01947-201ENST00000523742 DNAJB2P25686 324 aa10.66□□□□□ -0.7
LINC01947-201ENST00000523742 NCAPD3P42695 1498 aa10.66□□□□□ -0.7
LINC01947-201ENST00000523742 SMPD1P17405 629 aa10.65□□□□□ -0.7
LINC01947-201ENST00000523742 GMPRP36959 345 aa10.64□□□□□ -0.71
LINC01947-201ENST00000523742 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
LINC01947-201ENST00000523742 SPSB2Q99619 263 aa10.63□□□□□ -0.71
LINC01947-201ENST00000523742 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
LINC01947-201ENST00000523742 ARIH1Q9Y4X5 557 aaPredicted RBP10.63□□□□□ -0.71
LINC01947-201ENST00000523742 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
LINC01947-201ENST00000523742 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
LINC01947-201ENST00000523742 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
LINC01947-201ENST00000523742 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
LINC01947-201ENST00000523742 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
LINC01947-201ENST00000523742 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
LINC01947-201ENST00000523742 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
LINC01947-201ENST00000523742 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
LINC01947-201ENST00000523742 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
LINC01947-201ENST00000523742 E2F4Q16254 413 aa10.59□□□□□ -0.71
LINC01947-201ENST00000523742 J3QL48 77 aa10.58□□□□□ -0.72
LINC01947-201ENST00000523742 ADGRG1Q9Y653 693 aa10.58□□□□□ -0.72
LINC01947-201ENST00000523742 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
LINC01947-201ENST00000523742 HPS1Q92902 700 aa10.56□□□□□ -0.72
LINC01947-201ENST00000523742 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
LINC01947-201ENST00000523742 CUX2O14529 1486 aa10.55□□□□□ -0.72
LINC01947-201ENST00000523742 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
LINC01947-201ENST00000523742 PRDM9Q9NQV7 894 aa10.55□□□□□ -0.72
LINC01947-201ENST00000523742 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
LINC01947-201ENST00000523742 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
LINC01947-201ENST00000523742 VEGFBP49765 207 aa10.54□□□□□ -0.72
LINC01947-201ENST00000523742 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
LINC01947-201ENST00000523742 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms