RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
CPS1-211ENST00000523702 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
CPS1-211ENST00000523702 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
CPS1-211ENST00000523702 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
CPS1-211ENST00000523702 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
CPS1-211ENST00000523702 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
CPS1-211ENST00000523702 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
CPS1-211ENST00000523702 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
CPS1-211ENST00000523702 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
CPS1-211ENST00000523702 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
CPS1-211ENST00000523702 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
CPS1-211ENST00000523702 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
CPS1-211ENST00000523702 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
CPS1-211ENST00000523702 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPS1-211ENST00000523702 SLC10A3P09131 477 aa11.29□□□□□ -0.6
CPS1-211ENST00000523702 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
CPS1-211ENST00000523702 NDUFV2P19404 249 aa11.27□□□□□ -0.61
CPS1-211ENST00000523702 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.61
CPS1-211ENST00000523702 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.61
CPS1-211ENST00000523702 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
CPS1-211ENST00000523702 ZMYND15Q9H091 742 aa11.27□□□□□ -0.61
CPS1-211ENST00000523702 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
CPS1-211ENST00000523702 BHMG1C9JSJ3 638 aaPredicted RBP11.26□□□□□ -0.61
CPS1-211ENST00000523702 PBX2P40425 430 aa11.26□□□□□ -0.61
CPS1-211ENST00000523702 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
CPS1-211ENST00000523702 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
CPS1-211ENST00000523702 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
CPS1-211ENST00000523702 GCGRP47871 477 aa11.23□□□□□ -0.61
CPS1-211ENST00000523702 SPTLC1O15269 473 aa11.22□□□□□ -0.61
CPS1-211ENST00000523702 DIXDC1Q155Q3 683 aa11.22□□□□□ -0.61
CPS1-211ENST00000523702 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
CPS1-211ENST00000523702 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
CPS1-211ENST00000523702 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
CPS1-211ENST00000523702 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.61
CPS1-211ENST00000523702 HLA-CQ95604 372 aa11.21□□□□□ -0.61
CPS1-211ENST00000523702 KDM4AO75164 1064 aa11.2□□□□□ -0.62
CPS1-211ENST00000523702 QPCTQ16769 361 aa11.2□□□□□ -0.62
CPS1-211ENST00000523702 RFC5P40937 340 aa11.19□□□□□ -0.62
CPS1-211ENST00000523702 FLIIQ13045 1269 aa11.19□□□□□ -0.62
CPS1-211ENST00000523702 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
CPS1-211ENST00000523702 TK2O00142 265 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 LSM11P83369 360 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPS1-211ENST00000523702 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 MCM6Q14566 821 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
CPS1-211ENST00000523702 HRO43593 1189 aa11.16□□□□□ -0.62
CPS1-211ENST00000523702 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
CPS1-211ENST00000523702 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
CPS1-211ENST00000523702 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
CPS1-211ENST00000523702 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
CPS1-211ENST00000523702 HOXA2O43364 376 aa11.15□□□□□ -0.62
CPS1-211ENST00000523702 LILRB3O75022 631 aa11.15□□□□□ -0.62
CPS1-211ENST00000523702 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
CPS1-211ENST00000523702 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.62
CPS1-211ENST00000523702 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
CPS1-211ENST00000523702 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
CPS1-211ENST00000523702 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
CPS1-211ENST00000523702 RNF40O75150 1001 aa11.12□□□□□ -0.63
CPS1-211ENST00000523702 FUT2Q10981 343 aa11.12□□□□□ -0.63
CPS1-211ENST00000523702 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
CPS1-211ENST00000523702 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
CPS1-211ENST00000523702 FDX1P10109 184 aa11.11□□□□□ -0.63
CPS1-211ENST00000523702 HRCP23327 699 aa11.11□□□□□ -0.63
CPS1-211ENST00000523702 GJA5P36382 358 aa11.11□□□□□ -0.63
CPS1-211ENST00000523702 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
CPS1-211ENST00000523702 CFHP08603 1231 aa11.1□□□□□ -0.63
CPS1-211ENST00000523702 USP46P62068 366 aa11.1□□□□□ -0.63
CPS1-211ENST00000523702 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
CPS1-211ENST00000523702 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
CPS1-211ENST00000523702 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
CPS1-211ENST00000523702 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
CPS1-211ENST00000523702 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
CPS1-211ENST00000523702 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
CPS1-211ENST00000523702 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
CPS1-211ENST00000523702 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
CPS1-211ENST00000523702 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
CPS1-211ENST00000523702 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
CPS1-211ENST00000523702 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
CPS1-211ENST00000523702 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
CPS1-211ENST00000523702 A6NJR5 290 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 AP1G2O75843 785 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
CPS1-211ENST00000523702 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
CPS1-211ENST00000523702 MTMR14Q8NCE2 650 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
CPS1-211ENST00000523702 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
CPS1-211ENST00000523702 BCAMP50895 628 aa11.04□□□□□ -0.64
CPS1-211ENST00000523702 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
CPS1-211ENST00000523702 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
CPS1-211ENST00000523702 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
CPS1-211ENST00000523702 TRAK2O60296 914 aa11.02□□□□□ -0.65
CPS1-211ENST00000523702 CTDSPL2Q05D32 466 aa11.02□□□□□ -0.65
CPS1-211ENST00000523702 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
CPS1-211ENST00000523702 MORN1Q5T089 497 aa11.01□□□□□ -0.65
CPS1-211ENST00000523702 FNBP4Q8N3X1 1017 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms