RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ATP10AO60312 1499 aa9.04□□□□□ -0.96
PABPC1-223ENST00000523636 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
PABPC1-223ENST00000523636 C7P10643 843 aa9.04□□□□□ -0.96
PABPC1-223ENST00000523636 TMEM121BQ9BXQ6 578 aaPredicted RBP9.04□□□□□ -0.96
PABPC1-223ENST00000523636 C9orf84Q5VXU9 1444 aa9.04□□□□□ -0.96
PABPC1-223ENST00000523636 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
PABPC1-223ENST00000523636 VWDEQ8N2E2 1590 aa9.03□□□□□ -0.96
PABPC1-223ENST00000523636 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
PABPC1-223ENST00000523636 PTPRKQ15262 1439 aa9.03□□□□□ -0.96
PABPC1-223ENST00000523636 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
PABPC1-223ENST00000523636 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.96
PABPC1-223ENST00000523636 SHANK2Q9UPX8 1470 aa9.02□□□□□ -0.96
PABPC1-223ENST00000523636 CARMIL1Q5VZK9 1371 aa9.02□□□□□ -0.97
PABPC1-223ENST00000523636 ARID3CA6NKF2 412 aa9.02□□□□□ -0.97
PABPC1-223ENST00000523636 E2F4Q16254 413 aa9.02□□□□□ -0.97
PABPC1-223ENST00000523636 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
PABPC1-223ENST00000523636 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
PABPC1-223ENST00000523636 BOLA1Q9Y3E2 137 aa9.02□□□□□ -0.97
PABPC1-223ENST00000523636 G3V3G9 751 aa9.01□□□□□ -0.97
PABPC1-223ENST00000523636 SEC24BO95487 1268 aa9.01□□□□□ -0.97
PABPC1-223ENST00000523636 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
PABPC1-223ENST00000523636 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
PABPC1-223ENST00000523636 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
PABPC1-223ENST00000523636 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
PABPC1-223ENST00000523636 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
PABPC1-223ENST00000523636 MYO3AQ8NEV4 1616 aa8.99□□□□□ -0.97
PABPC1-223ENST00000523636 ARHGEF1Q92888 912 aaKnown RBP8.99□□□□□ -0.97
PABPC1-223ENST00000523636 METRNQ9UJH8 293 aa8.99□□□□□ -0.97
PABPC1-223ENST00000523636 POTEB2H3BUK9 544 aa8.98□□□□□ -0.97
PABPC1-223ENST00000523636 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
PABPC1-223ENST00000523636 CFAP74Q9C0B2 1584 aa8.98□□□□□ -0.97
PABPC1-223ENST00000523636 RNF17Q9BXT8 1623 aaKnown RBP8.98□□□□□ -0.97
PABPC1-223ENST00000523636 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-223ENST00000523636 POLR1AO95602 1720 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-223ENST00000523636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.96□□□□□ -0.97
PABPC1-223ENST00000523636 UTRNP46939 3433 aa8.96□□□□□ -0.98
PABPC1-223ENST00000523636 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
PABPC1-223ENST00000523636 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
PABPC1-223ENST00000523636 XIRP1Q702N8 1843 aaKnown RBP8.96□□□□□ -0.98
PABPC1-223ENST00000523636 NPATQ14207 1427 aa8.96□□□□□ -0.98
PABPC1-223ENST00000523636 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 KIF27Q86VH2 1401 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 AGLP35573 1532 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 REREQ9P2R6 1566 aa8.95□□□□□ -0.98
PABPC1-223ENST00000523636 PPP1R15BQ5SWA1 713 aa8.94□□□□□ -0.98
PABPC1-223ENST00000523636 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
PABPC1-223ENST00000523636 MROH2AA6NES4 1674 aa8.94□□□□□ -0.98
PABPC1-223ENST00000523636 FOXK1P85037 733 aa8.93□□□□□ -0.98
PABPC1-223ENST00000523636 ABCA6Q8N139 1617 aa8.93□□□□□ -0.98
PABPC1-223ENST00000523636 DNMT1P26358 1616 aaKnown RBP8.92□□□□□ -0.98
PABPC1-223ENST00000523636 SCAPERQ9BY12 1400 aa8.92□□□□□ -0.98
PABPC1-223ENST00000523636 KIF3CO14782 793 aa8.92□□□□□ -0.98
PABPC1-223ENST00000523636 LRP6O75581 1613 aa8.91□□□□□ -0.98
PABPC1-223ENST00000523636 KDM5CP41229 1560 aa8.9□□□□□ -0.98
PABPC1-223ENST00000523636 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
PABPC1-223ENST00000523636 DSG2Q14126 1118 aa8.9□□□□□ -0.98
PABPC1-223ENST00000523636 OTUD5Q96G74 571 aa8.9□□□□□ -0.98
PABPC1-223ENST00000523636 ARXQ96QS3 562 aa8.9□□□□□ -0.98
PABPC1-223ENST00000523636 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
PABPC1-223ENST00000523636 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
PABPC1-223ENST00000523636 LRP5O75197 1615 aa8.89□□□□□ -0.99
PABPC1-223ENST00000523636 CTTNBP2Q8WZ74 1663 aa8.88□□□□□ -0.99
PABPC1-223ENST00000523636 SYNMO15061 1565 aa8.88□□□□□ -0.99
PABPC1-223ENST00000523636 ZMYM3Q14202 1370 aa8.87□□□□□ -0.99
PABPC1-223ENST00000523636 CDK12Q9NYV4 1490 aaPredicted RBP8.87□□□□□ -0.99
PABPC1-223ENST00000523636 FAM135BQ49AJ0 1406 aa8.87□□□□□ -0.99
PABPC1-223ENST00000523636 CNTLNQ9NXG0 1405 aa8.87□□□□□ -0.99
PABPC1-223ENST00000523636 ROBO1Q9Y6N7 1651 aa8.86□□□□□ -0.99
PABPC1-223ENST00000523636 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
PABPC1-223ENST00000523636 PLPP6Q8IY26 295 aa8.86□□□□□ -0.99
PABPC1-223ENST00000523636 RAPGEF6Q8TEU7 1601 aa8.86□□□□□ -0.99
PABPC1-223ENST00000523636 GOLGA3Q08378 1498 aa8.85□□□□□ -0.99
PABPC1-223ENST00000523636 TMEM92Q6UXU6 159 aa8.85□□□□□ -0.99
PABPC1-223ENST00000523636 CLTCQ00610 1675 aaKnown RBP8.85□□□□□ -0.99
PABPC1-223ENST00000523636 NUP153P49790 1475 aaKnown RBP8.84□□□□□ -0.99
PABPC1-223ENST00000523636 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-223ENST00000523636 RGS12O14924 1447 aa8.84□□□□□ -0.99
PABPC1-223ENST00000523636 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
PABPC1-223ENST00000523636 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
PABPC1-223ENST00000523636 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
PABPC1-223ENST00000523636 EMILIN3Q9NT22 766 aa8.83□□□□□ -1
PABPC1-223ENST00000523636 MED14O60244 1454 aa8.83□□□□□ -1
PABPC1-223ENST00000523636 SPDYE16A6NNV3 312 aaPredicted RBP8.82□□□□□ -1
PABPC1-223ENST00000523636 MAMSTRQ6ZN01 415 aa8.82□□□□□ -1
PABPC1-223ENST00000523636 AFAP1Q8N556 730 aa8.82□□□□□ -1
PABPC1-223ENST00000523636 PLCH2O75038 1416 aa8.81□□□□□ -1
PABPC1-223ENST00000523636 CDK13Q14004 1512 aaKnown RBP8.81□□□□□ -1
PABPC1-223ENST00000523636 SEMA3EO15041 775 aa8.81□□□□□ -1
PABPC1-223ENST00000523636 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
PABPC1-223ENST00000523636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
PABPC1-223ENST00000523636 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.81□□□□□ -1
PABPC1-223ENST00000523636 ZNF518AQ6AHZ1 1483 aa8.81□□□□□ -1
PABPC1-223ENST00000523636 IQGAP1P46940 1657 aa8.81□□□□□ -1
PABPC1-223ENST00000523636 DEPDC5O75140 1603 aa8.8□□□□□ -1
PABPC1-223ENST00000523636 RXRBP28702 533 aa8.8□□□□□ -1
PABPC1-223ENST00000523636 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
PABPC1-223ENST00000523636 ZC3H13Q5T200 1668 aaKnown RBP8.8□□□□□ -1
PABPC1-223ENST00000523636 KIDINS220Q9ULH0 1771 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms