RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
CSMD1-212ENST00000523387 ZMYND15Q9H091 742 aa11.34□□□□□ -0.59
CSMD1-212ENST00000523387 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
CSMD1-212ENST00000523387 PTMSP20962 102 aa11.34□□□□□ -0.59
CSMD1-212ENST00000523387 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
CSMD1-212ENST00000523387 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
CSMD1-212ENST00000523387 DDX49Q9Y6V7 483 aaKnown RBP11.33□□□□□ -0.6
CSMD1-212ENST00000523387 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
CSMD1-212ENST00000523387 CLCN1P35523 988 aa11.32□□□□□ -0.6
CSMD1-212ENST00000523387 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
CSMD1-212ENST00000523387 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
CSMD1-212ENST00000523387 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
CSMD1-212ENST00000523387 TBC1D32Q96NH3 1257 aa11.31□□□□□ -0.6
CSMD1-212ENST00000523387 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
CSMD1-212ENST00000523387 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
CSMD1-212ENST00000523387 FAM13BQ9NYF5 915 aa11.3□□□□□ -0.6
CSMD1-212ENST00000523387 SENP3Q9H4L4 574 aaPredicted RBP11.3□□□□□ -0.6
CSMD1-212ENST00000523387 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
CSMD1-212ENST00000523387 AAMPQ13685 434 aa11.3□□□□□ -0.6
CSMD1-212ENST00000523387 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
CSMD1-212ENST00000523387 IQGAP2Q13576 1575 aa11.3□□□□□ -0.6
CSMD1-212ENST00000523387 TPM2P07951 284 aa11.29□□□□□ -0.6
CSMD1-212ENST00000523387 KIF14Q15058 1648 aa11.29□□□□□ -0.6
CSMD1-212ENST00000523387 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
CSMD1-212ENST00000523387 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
CSMD1-212ENST00000523387 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-212ENST00000523387 TCP11L2Q8N4U5 519 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
CSMD1-212ENST00000523387 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-212ENST00000523387 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 NINLQ9Y2I6 1382 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 TESK2Q96S53 571 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
CSMD1-212ENST00000523387 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
CSMD1-212ENST00000523387 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.6
CSMD1-212ENST00000523387 WWC1Q8IX03 1113 aa11.27□□□□□ -0.6
CSMD1-212ENST00000523387 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
CSMD1-212ENST00000523387 SAMD9Q5K651 1589 aa11.27□□□□□ -0.61
CSMD1-212ENST00000523387 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
CSMD1-212ENST00000523387 KDM5CP41229 1560 aa11.27□□□□□ -0.61
CSMD1-212ENST00000523387 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-212ENST00000523387 ZMYM4Q5VZL5 1548 aa11.26□□□□□ -0.61
CSMD1-212ENST00000523387 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
CSMD1-212ENST00000523387 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
CSMD1-212ENST00000523387 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
CSMD1-212ENST00000523387 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
CSMD1-212ENST00000523387 DNMT1P26358 1616 aaKnown RBP11.25□□□□□ -0.61
CSMD1-212ENST00000523387 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
CSMD1-212ENST00000523387 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
CSMD1-212ENST00000523387 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
CSMD1-212ENST00000523387 URB2Q14146 1524 aaKnown RBP11.24□□□□□ -0.61
CSMD1-212ENST00000523387 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
CSMD1-212ENST00000523387 MVPQ14764 893 aaKnown RBP11.24□□□□□ -0.61
CSMD1-212ENST00000523387 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
CSMD1-212ENST00000523387 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
CSMD1-212ENST00000523387 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
CSMD1-212ENST00000523387 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
CSMD1-212ENST00000523387 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
CSMD1-212ENST00000523387 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
CSMD1-212ENST00000523387 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
CSMD1-212ENST00000523387 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
CSMD1-212ENST00000523387 MBD5Q9P267 1494 aa11.23□□□□□ -0.61
CSMD1-212ENST00000523387 APBB1O00213 710 aa11.22□□□□□ -0.61
CSMD1-212ENST00000523387 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
CSMD1-212ENST00000523387 TNPO1Q92973 898 aaKnown RBP11.22□□□□□ -0.61
CSMD1-212ENST00000523387 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
CSMD1-212ENST00000523387 SAFB2Q14151 953 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSMD1-212ENST00000523387 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-212ENST00000523387 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-212ENST00000523387 TSR2Q969E8 191 aaKnown RBP11.22□□□□□ -0.61
CSMD1-212ENST00000523387 WDR62O43379 1518 aa11.22□□□□□ -0.61
CSMD1-212ENST00000523387 INSRP06213 1382 aa11.21□□□□□ -0.61
CSMD1-212ENST00000523387 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
CSMD1-212ENST00000523387 MTHFSP49914 203 aa11.21□□□□□ -0.62
CSMD1-212ENST00000523387 CAVIN1Q6NZI2 390 aaKnown RBP11.21□□□□□ -0.62
CSMD1-212ENST00000523387 ZSCAN30Q86W11 494 aa11.21□□□□□ -0.62
CSMD1-212ENST00000523387 COL17A1Q9UMD9 1497 aaPredicted RBP11.21□□□□□ -0.62
CSMD1-212ENST00000523387 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
CSMD1-212ENST00000523387 PLB1Q6P1J6 1458 aa11.2□□□□□ -0.62
CSMD1-212ENST00000523387 RLBP1P12271 317 aa11.2□□□□□ -0.62
CSMD1-212ENST00000523387 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-212ENST00000523387 USP19O94966 1318 aa11.2□□□□□ -0.62
CSMD1-212ENST00000523387 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
CSMD1-212ENST00000523387 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 PDCL3Q9H2J4 239 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 ANTXR1Q9H6X2 564 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 KANK1Q14678 1352 aa11.19□□□□□ -0.62
CSMD1-212ENST00000523387 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
CSMD1-212ENST00000523387 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-212ENST00000523387 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
CSMD1-212ENST00000523387 FSD2A1L4K1 749 aa11.17□□□□□ -0.62
CSMD1-212ENST00000523387 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
CSMD1-212ENST00000523387 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
CSMD1-212ENST00000523387 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-212ENST00000523387 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms