RNA–Protein interactions for RNA: ENST00000523227.5

CSGALNACT1-212, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-212ENST00000523227 TET3O43151 1660 aa9.74□□□□□ -0.85
CSGALNACT1-212ENST00000523227 SCAF11Q99590 1463 aaKnown RBP9.74□□□□□ -0.85
CSGALNACT1-212ENST00000523227 ARHGAP23Q9P227 1491 aa9.74□□□□□ -0.85
CSGALNACT1-212ENST00000523227 UNC13BO14795 1591 aa9.74□□□□□ -0.85
CSGALNACT1-212ENST00000523227 GCC2Q8IWJ2 1684 aa9.74□□□□□ -0.85
CSGALNACT1-212ENST00000523227 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
CSGALNACT1-212ENST00000523227 NOS1P29475 1434 aa9.73□□□□□ -0.85
CSGALNACT1-212ENST00000523227 LRRC7Q96NW7 1537 aa9.72□□□□□ -0.85
CSGALNACT1-212ENST00000523227 SYNMO15061 1565 aa9.72□□□□□ -0.85
CSGALNACT1-212ENST00000523227 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
CSGALNACT1-212ENST00000523227 IDI1Q13907 227 aa9.71□□□□□ -0.86
CSGALNACT1-212ENST00000523227 SLC52A1Q9NWF4 448 aa9.71□□□□□ -0.86
CSGALNACT1-212ENST00000523227 TMEM2Q9UHN6 1383 aa9.71□□□□□ -0.86
CSGALNACT1-212ENST00000523227 ADGRB3O60242 1522 aa9.71□□□□□ -0.86
CSGALNACT1-212ENST00000523227 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.86
CSGALNACT1-212ENST00000523227 STRCP1A6NGW2 1772 aa9.69□□□□□ -0.86
CSGALNACT1-212ENST00000523227 LTKP29376 864 aa9.69□□□□□ -0.86
CSGALNACT1-212ENST00000523227 HDGFP51858 240 aaKnown RBP9.69□□□□□ -0.86
CSGALNACT1-212ENST00000523227 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
CSGALNACT1-212ENST00000523227 E9PCH4 1651 aa9.68□□□□□ -0.86
CSGALNACT1-212ENST00000523227 RRBP1Q9P2E9 1410 aaKnown RBP9.68□□□□□ -0.86
CSGALNACT1-212ENST00000523227 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
CSGALNACT1-212ENST00000523227 KCNA6P17658 529 aa9.67□□□□□ -0.86
CSGALNACT1-212ENST00000523227 ITGAEP38570 1179 aa9.67□□□□□ -0.86
CSGALNACT1-212ENST00000523227 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
CSGALNACT1-212ENST00000523227 NUP155O75694 1391 aa9.66□□□□□ -0.86
CSGALNACT1-212ENST00000523227 TMEM131LA2VDJ0 1609 aa9.66□□□□□ -0.86
CSGALNACT1-212ENST00000523227 ALKQ9UM73 1620 aa9.66□□□□□ -0.86
CSGALNACT1-212ENST00000523227 MYO5BQ9ULV0 1848 aa9.66□□□□□ -0.86
CSGALNACT1-212ENST00000523227 BCANQ96GW7 911 aa9.65□□□□□ -0.86
CSGALNACT1-212ENST00000523227 RGS17Q9UGC6 210 aaPredicted RBP9.65□□□□□ -0.86
CSGALNACT1-212ENST00000523227 ZFYVE9O95405 1425 aa9.64□□□□□ -0.87
CSGALNACT1-212ENST00000523227 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-212ENST00000523227 XIRP1Q702N8 1843 aaKnown RBP9.63□□□□□ -0.87
CSGALNACT1-212ENST00000523227 MSH6P52701 1360 aa9.63□□□□□ -0.87
CSGALNACT1-212ENST00000523227 SPHKAPQ2M3C7 1700 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 SLAIN2Q9P270 581 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 RIMS2Q9UQ26 1411 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
CSGALNACT1-212ENST00000523227 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
CSGALNACT1-212ENST00000523227 ZNF772Q68DY9 489 aaPredicted RBP9.61□□□□□ -0.87
CSGALNACT1-212ENST00000523227 SLC26A8Q96RN1 970 aa9.61□□□□□ -0.87
CSGALNACT1-212ENST00000523227 NAIPQ13075 1403 aa9.61□□□□□ -0.87
CSGALNACT1-212ENST00000523227 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
CSGALNACT1-212ENST00000523227 POTEAQ6S8J7 498 aa9.6□□□□□ -0.87
CSGALNACT1-212ENST00000523227 CHD2O14647 1828 aaKnown RBP9.6□□□□□ -0.87
CSGALNACT1-212ENST00000523227 JCADQ9P266 1359 aa9.6□□□□□ -0.87
CSGALNACT1-212ENST00000523227 DIP2AQ14689 1571 aa9.59□□□□□ -0.87
CSGALNACT1-212ENST00000523227 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
CSGALNACT1-212ENST00000523227 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
CSGALNACT1-212ENST00000523227 NCOA3Q9Y6Q9 1424 aa9.58□□□□□ -0.88
CSGALNACT1-212ENST00000523227 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
CSGALNACT1-212ENST00000523227 TBX22Q9Y458 520 aa9.58□□□□□ -0.88
CSGALNACT1-212ENST00000523227 SPATA31A6Q5VVP1 1343 aa9.57□□□□□ -0.88
CSGALNACT1-212ENST00000523227 TRPM2O94759 1503 aa9.57□□□□□ -0.88
CSGALNACT1-212ENST00000523227 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
CSGALNACT1-212ENST00000523227 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
CSGALNACT1-212ENST00000523227 PIK3R4Q99570 1358 aa9.57□□□□□ -0.88
CSGALNACT1-212ENST00000523227 KIF1BO60333 1816 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 ATF3P18847 181 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 PHLPP1O60346 1717 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
CSGALNACT1-212ENST00000523227 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
CSGALNACT1-212ENST00000523227 RXRBP28702 533 aa9.54□□□□□ -0.88
CSGALNACT1-212ENST00000523227 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
CSGALNACT1-212ENST00000523227 SETBP1Q9Y6X0 1596 aa9.54□□□□□ -0.88
CSGALNACT1-212ENST00000523227 ZNF326Q5BKZ1 582 aaKnown RBP9.53□□□□□ -0.88
CSGALNACT1-212ENST00000523227 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
CSGALNACT1-212ENST00000523227 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
CSGALNACT1-212ENST00000523227 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
CSGALNACT1-212ENST00000523227 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
CSGALNACT1-212ENST00000523227 NEXMIFQ5QGS0 1516 aa9.52□□□□□ -0.88
CSGALNACT1-212ENST00000523227 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
CSGALNACT1-212ENST00000523227 U3KPZ7 1027 aaPredicted RBP9.52□□□□□ -0.89
CSGALNACT1-212ENST00000523227 UPF1Q92900 1129 aaKnown RBP eCLIP9.51□□□□□ -0.89
CSGALNACT1-212ENST00000523227 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
CSGALNACT1-212ENST00000523227 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
CSGALNACT1-212ENST00000523227 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.5□□□□□ -0.89
CSGALNACT1-212ENST00000523227 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
CSGALNACT1-212ENST00000523227 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
CSGALNACT1-212ENST00000523227 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
CSGALNACT1-212ENST00000523227 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
CSGALNACT1-212ENST00000523227 PPLO60437 1756 aa9.48□□□□□ -0.89
CSGALNACT1-212ENST00000523227 DCCP43146 1447 aa9.48□□□□□ -0.89
CSGALNACT1-212ENST00000523227 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
CSGALNACT1-212ENST00000523227 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
CSGALNACT1-212ENST00000523227 SHPRHQ149N8 1683 aa9.47□□□□□ -0.89
CSGALNACT1-212ENST00000523227 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
CSGALNACT1-212ENST00000523227 COL16A1Q07092 1604 aaPredicted RBP9.46□□□□□ -0.89
CSGALNACT1-212ENST00000523227 SETD1AO15047 1707 aaKnown RBP9.46□□□□□ -0.89
CSGALNACT1-212ENST00000523227 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
CSGALNACT1-212ENST00000523227 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
CSGALNACT1-212ENST00000523227 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
CSGALNACT1-212ENST00000523227 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms