RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 PPLO60437 1756 aa23.29■■□□□ 1.32
SREK1-212ENST00000522912 NRXN1Q9ULB1 1477 aa23.28■■□□□ 1.32
SREK1-212ENST00000522912 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
SREK1-212ENST00000522912 PREX1Q8TCU6 1659 aa23.27■■□□□ 1.32
SREK1-212ENST00000522912 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
SREK1-212ENST00000522912 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
SREK1-212ENST00000522912 CFAP70Q5T0N1 1121 aa23.24■■□□□ 1.31
SREK1-212ENST00000522912 GTF3C3Q9Y5Q9 886 aa23.24■■□□□ 1.31
SREK1-212ENST00000522912 CCDC184Q52MB2 194 aa23.21■■□□□ 1.31
SREK1-212ENST00000522912 RPGRIP1LQ68CZ1 1315 aa23.2■■□□□ 1.31
SREK1-212ENST00000522912 IDI1Q13907 227 aa23.2■■□□□ 1.3
SREK1-212ENST00000522912 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
SREK1-212ENST00000522912 CLTCQ00610 1675 aaKnown RBP23.2■■□□□ 1.3
SREK1-212ENST00000522912 TMF1P82094 1093 aa23.18■■□□□ 1.3
SREK1-212ENST00000522912 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
SREK1-212ENST00000522912 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
SREK1-212ENST00000522912 PIK3C2GO75747 1445 aa23.18■■□□□ 1.3
SREK1-212ENST00000522912 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
SREK1-212ENST00000522912 NEXMIFQ5QGS0 1516 aa23.17■■□□□ 1.3
SREK1-212ENST00000522912 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
SREK1-212ENST00000522912 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
SREK1-212ENST00000522912 MLECQ14165 292 aa23.15■■□□□ 1.3
SREK1-212ENST00000522912 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.3
SREK1-212ENST00000522912 EIF3AQ14152 1382 aaKnown RBP23.13■■□□□ 1.29
SREK1-212ENST00000522912 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
SREK1-212ENST00000522912 C14orf93Q9H972 538 aaKnown RBP23.13■■□□□ 1.29
SREK1-212ENST00000522912 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
SREK1-212ENST00000522912 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
SREK1-212ENST00000522912 ADGRB1O14514 1584 aa23.09■■□□□ 1.29
SREK1-212ENST00000522912 VGFO15240 615 aaPredicted RBP23.08■■□□□ 1.29
SREK1-212ENST00000522912 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.29
SREK1-212ENST00000522912 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
SREK1-212ENST00000522912 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
SREK1-212ENST00000522912 ZFYVE9O95405 1425 aa23.06■■□□□ 1.28
SREK1-212ENST00000522912 PANK3Q9H999 370 aa23.05■■□□□ 1.28
SREK1-212ENST00000522912 TMEM132EQ6IEE7 984 aa23.04■■□□□ 1.28
SREK1-212ENST00000522912 CDCA8Q53HL2 280 aa23.03■■□□□ 1.28
SREK1-212ENST00000522912 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
SREK1-212ENST00000522912 KDM5AP29375 1690 aaKnown RBP23.02■■□□□ 1.28
SREK1-212ENST00000522912 MYOM1P52179 1685 aa23.02■■□□□ 1.28
SREK1-212ENST00000522912 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
SREK1-212ENST00000522912 HNRNPUQ00839 825 aaKnown RBP eCLIP23.01■■□□□ 1.27
SREK1-212ENST00000522912 RALBP1Q15311 655 aa23.01■■□□□ 1.27
SREK1-212ENST00000522912 TRAK1Q9UPV9 953 aa23.01■■□□□ 1.27
SREK1-212ENST00000522912 ZMYM3Q14202 1370 aa23■■□□□ 1.27
SREK1-212ENST00000522912 CENPJQ9HC77 1338 aaPredicted RBP22.99■■□□□ 1.27
SREK1-212ENST00000522912 SBNO2Q9Y2G9 1366 aa22.99■■□□□ 1.27
SREK1-212ENST00000522912 SLC24A1O60721 1099 aa22.98■■□□□ 1.27
SREK1-212ENST00000522912 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
SREK1-212ENST00000522912 QRICH2Q9H0J4 1663 aa22.98■■□□□ 1.27
SREK1-212ENST00000522912 PARD3Q8TEW0 1356 aa22.98■■□□□ 1.27
SREK1-212ENST00000522912 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
SREK1-212ENST00000522912 MYBBP1AQ9BQG0 1328 aaKnown RBP22.97■■□□□ 1.27
SREK1-212ENST00000522912 A2ML1A8K2U0 1454 aa22.97■■□□□ 1.27
SREK1-212ENST00000522912 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
SREK1-212ENST00000522912 ARHGEF28Q8N1W1 1705 aaKnown RBP22.96■■□□□ 1.27
SREK1-212ENST00000522912 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
SREK1-212ENST00000522912 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
SREK1-212ENST00000522912 CC2D1BQ5T0F9 858 aaKnown RBP22.92■■□□□ 1.26
SREK1-212ENST00000522912 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
SREK1-212ENST00000522912 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
SREK1-212ENST00000522912 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
SREK1-212ENST00000522912 ALKQ9UM73 1620 aa22.89■■□□□ 1.25
SREK1-212ENST00000522912 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
SREK1-212ENST00000522912 KNSTRNQ9Y448 316 aa22.87■■□□□ 1.25
SREK1-212ENST00000522912 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
SREK1-212ENST00000522912 TNRQ92752 1358 aa22.86■■□□□ 1.25
SREK1-212ENST00000522912 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
SREK1-212ENST00000522912 STK26Q9P289 416 aa22.84■■□□□ 1.25
SREK1-212ENST00000522912 LRPPRCP42704 1394 aaKnown RBP22.83■■□□□ 1.24
SREK1-212ENST00000522912 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.24
SREK1-212ENST00000522912 TULP4Q9NRJ4 1543 aa22.83■■□□□ 1.24
SREK1-212ENST00000522912 SETD1AO15047 1707 aaKnown RBP22.82■■□□□ 1.24
SREK1-212ENST00000522912 PTPRMP28827 1452 aa22.82■■□□□ 1.24
SREK1-212ENST00000522912 ZBED9Q6R2W3 1325 aa22.82■■□□□ 1.24
SREK1-212ENST00000522912 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
SREK1-212ENST00000522912 CARD14Q9BXL6 1004 aa22.8■■□□□ 1.24
SREK1-212ENST00000522912 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
SREK1-212ENST00000522912 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
SREK1-212ENST00000522912 C3P01024 1663 aa22.78■■□□□ 1.24
SREK1-212ENST00000522912 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
SREK1-212ENST00000522912 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.24
SREK1-212ENST00000522912 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
SREK1-212ENST00000522912 CEBPAP49715 358 aaPredicted RBP22.77■■□□□ 1.24
SREK1-212ENST00000522912 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.77■■□□□ 1.24
SREK1-212ENST00000522912 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
SREK1-212ENST00000522912 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
SREK1-212ENST00000522912 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
SREK1-212ENST00000522912 DNAJC5Q9H3Z4 198 aa22.75■■□□□ 1.23
SREK1-212ENST00000522912 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
SREK1-212ENST00000522912 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
SREK1-212ENST00000522912 TMEM2Q9UHN6 1383 aa22.72■■□□□ 1.23
SREK1-212ENST00000522912 NLRP1Q9C000 1473 aa22.72■■□□□ 1.23
SREK1-212ENST00000522912 CABP2Q9NPB3 220 aa22.72■■□□□ 1.23
SREK1-212ENST00000522912 POGKQ9P215 609 aa22.72■■□□□ 1.23
SREK1-212ENST00000522912 DLC1Q96QB1 1528 aa22.7■■□□□ 1.23
SREK1-212ENST00000522912 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.22
SREK1-212ENST00000522912 MINK1Q8N4C8 1332 aaPredicted RBP22.7■■□□□ 1.22
SREK1-212ENST00000522912 NSD3Q9BZ95 1437 aa22.69■■□□□ 1.22
SREK1-212ENST00000522912 METP08581 1390 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms