RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SIGLEC1Q9BZZ2 1709 aa11.17□□□□□ -0.62
VPS13B-211ENST00000522802 SLC34A2O95436 690 aa11.16□□□□□ -0.62
VPS13B-211ENST00000522802 HSPA2P54652 639 aa11.14□□□□□ -0.63
VPS13B-211ENST00000522802 GOLGA3Q08378 1498 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 RICTORQ6R327 1708 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 SPATA31D1Q6ZQQ2 1576 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
VPS13B-211ENST00000522802 BCANQ96GW7 911 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
VPS13B-211ENST00000522802 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
VPS13B-211ENST00000522802 ERBB3P21860 1342 aa11.11□□□□□ -0.63
VPS13B-211ENST00000522802 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
VPS13B-211ENST00000522802 SOCS7O14512 581 aa11.11□□□□□ -0.63
VPS13B-211ENST00000522802 NEO1Q92859 1461 aa11.11□□□□□ -0.63
VPS13B-211ENST00000522802 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
VPS13B-211ENST00000522802 ATP10BO94823 1461 aa11.1□□□□□ -0.63
VPS13B-211ENST00000522802 FER1L4A9Z1Z3 1794 aa11.1□□□□□ -0.63
VPS13B-211ENST00000522802 DPYSL4O14531 572 aa11.09□□□□□ -0.63
VPS13B-211ENST00000522802 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
VPS13B-211ENST00000522802 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
VPS13B-211ENST00000522802 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS13B-211ENST00000522802 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
VPS13B-211ENST00000522802 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
VPS13B-211ENST00000522802 NBR1Q14596 966 aa11.07□□□□□ -0.64
VPS13B-211ENST00000522802 ZMYM4Q5VZL5 1548 aa11.06□□□□□ -0.64
VPS13B-211ENST00000522802 PREX1Q8TCU6 1659 aa11.06□□□□□ -0.64
VPS13B-211ENST00000522802 TBC1D12O60347 775 aa11.06□□□□□ -0.64
VPS13B-211ENST00000522802 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
VPS13B-211ENST00000522802 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
VPS13B-211ENST00000522802 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
VPS13B-211ENST00000522802 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
VPS13B-211ENST00000522802 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
VPS13B-211ENST00000522802 FANCAO15360 1455 aa11.05□□□□□ -0.64
VPS13B-211ENST00000522802 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
VPS13B-211ENST00000522802 PDIA6Q15084 440 aa11.04□□□□□ -0.64
VPS13B-211ENST00000522802 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
VPS13B-211ENST00000522802 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
VPS13B-211ENST00000522802 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
VPS13B-211ENST00000522802 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
VPS13B-211ENST00000522802 CFAP74Q9C0B2 1584 aa11.03□□□□□ -0.64
VPS13B-211ENST00000522802 DENND4BO75064 1496 aaPredicted RBP11.02□□□□□ -0.65
VPS13B-211ENST00000522802 SEMA3EO15041 775 aa11.02□□□□□ -0.65
VPS13B-211ENST00000522802 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
VPS13B-211ENST00000522802 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
VPS13B-211ENST00000522802 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
VPS13B-211ENST00000522802 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
VPS13B-211ENST00000522802 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
VPS13B-211ENST00000522802 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
VPS13B-211ENST00000522802 EVI5O60447 810 aa11□□□□□ -0.65
VPS13B-211ENST00000522802 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
VPS13B-211ENST00000522802 AKNAQ7Z591 1439 aa11□□□□□ -0.65
VPS13B-211ENST00000522802 PRXQ9BXM0 1461 aa11□□□□□ -0.65
VPS13B-211ENST00000522802 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
VPS13B-211ENST00000522802 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
VPS13B-211ENST00000522802 TESPA1A2RU30 521 aaPredicted RBP10.99□□□□□ -0.65
VPS13B-211ENST00000522802 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
VPS13B-211ENST00000522802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS13B-211ENST00000522802 PTGER2P43116 358 aa10.97□□□□□ -0.65
VPS13B-211ENST00000522802 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
VPS13B-211ENST00000522802 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■■□□ 16.9
VPS13B-211ENST00000522802 MLECQ14165 292 aa10.95□□□□□ -0.66
VPS13B-211ENST00000522802 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
VPS13B-211ENST00000522802 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
VPS13B-211ENST00000522802 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
VPS13B-211ENST00000522802 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
VPS13B-211ENST00000522802 NUDT7P0C024 238 aa10.92□□□□□ -0.66
VPS13B-211ENST00000522802 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-211ENST00000522802 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-211ENST00000522802 C3P01024 1663 aa10.91□□□□□ -0.66
VPS13B-211ENST00000522802 C9orf84Q5VXU9 1444 aa10.91□□□□□ -0.66
VPS13B-211ENST00000522802 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
VPS13B-211ENST00000522802 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
VPS13B-211ENST00000522802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
VPS13B-211ENST00000522802 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
VPS13B-211ENST00000522802 ATP10AO60312 1499 aa10.88□□□□□ -0.67
VPS13B-211ENST00000522802 PTPRTO14522 1441 aa10.88□□□□□ -0.67
VPS13B-211ENST00000522802 DDX12PQ92771 950 aa10.88□□□□□ -0.67
VPS13B-211ENST00000522802 MYO5CQ9NQX4 1742 aa10.88□□□□□ -0.67
VPS13B-211ENST00000522802 IQSEC2Q5JU85 1478 aa10.87□□□□□ -0.67
VPS13B-211ENST00000522802 DIP2CQ9Y2E4 1556 aa10.87□□□□□ -0.67
VPS13B-211ENST00000522802 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
VPS13B-211ENST00000522802 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
VPS13B-211ENST00000522802 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
VPS13B-211ENST00000522802 KDM5CP41229 1560 aa10.86□□□□□ -0.67
VPS13B-211ENST00000522802 TULP1O00294 542 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-211ENST00000522802 OSBPP22059 807 aa10.86□□□□□ -0.67
VPS13B-211ENST00000522802 PHF14O94880 888 aa10.85□□□□□ -0.67
VPS13B-211ENST00000522802 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
VPS13B-211ENST00000522802 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 KIF14Q15058 1648 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 FOSBP53539 338 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
VPS13B-211ENST00000522802 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 SETD1BQ9UPS6 1966 aaKnown RBP10.84□□□□□ -0.67
VPS13B-211ENST00000522802 PLCH2O75038 1416 aa10.84□□□□□ -0.67
VPS13B-211ENST00000522802 REREQ9P2R6 1566 aa10.83□□□□□ -0.68
VPS13B-211ENST00000522802 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms