RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 KIF1BO60333 1816 aa20.53■□□□□ 0.88
EXTL3-211ENST00000522698 MED14O60244 1454 aa20.51■□□□□ 0.87
EXTL3-211ENST00000522698 IQGAP1P46940 1657 aa20.5■□□□□ 0.87
EXTL3-211ENST00000522698 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
EXTL3-211ENST00000522698 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
EXTL3-211ENST00000522698 MYO5BQ9ULV0 1848 aa20.48■□□□□ 0.87
EXTL3-211ENST00000522698 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.87
EXTL3-211ENST00000522698 ALKQ9UM73 1620 aa20.45■□□□□ 0.87
EXTL3-211ENST00000522698 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
EXTL3-211ENST00000522698 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
EXTL3-211ENST00000522698 SLC52A1Q9NWF4 448 aa20.45■□□□□ 0.86
EXTL3-211ENST00000522698 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
EXTL3-211ENST00000522698 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
EXTL3-211ENST00000522698 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
EXTL3-211ENST00000522698 IDI1Q13907 227 aa20.42■□□□□ 0.86
EXTL3-211ENST00000522698 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
EXTL3-211ENST00000522698 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
EXTL3-211ENST00000522698 IFT172Q9UG01 1749 aa20.4■□□□□ 0.86
EXTL3-211ENST00000522698 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
EXTL3-211ENST00000522698 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
EXTL3-211ENST00000522698 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
EXTL3-211ENST00000522698 PPLO60437 1756 aa20.36■□□□□ 0.85
EXTL3-211ENST00000522698 ARHGAP23Q9P227 1491 aa20.36■□□□□ 0.85
EXTL3-211ENST00000522698 LTKP29376 864 aa20.35■□□□□ 0.85
EXTL3-211ENST00000522698 SLIT1O75093 1534 aa20.35■□□□□ 0.85
EXTL3-211ENST00000522698 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
EXTL3-211ENST00000522698 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
EXTL3-211ENST00000522698 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
EXTL3-211ENST00000522698 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
EXTL3-211ENST00000522698 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
EXTL3-211ENST00000522698 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
EXTL3-211ENST00000522698 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 MYOM2P54296 1465 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 RGL3Q3MIN7 710 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
EXTL3-211ENST00000522698 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
EXTL3-211ENST00000522698 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
EXTL3-211ENST00000522698 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
EXTL3-211ENST00000522698 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
EXTL3-211ENST00000522698 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
EXTL3-211ENST00000522698 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
EXTL3-211ENST00000522698 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
EXTL3-211ENST00000522698 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
EXTL3-211ENST00000522698 TMEM94Q12767 1356 aa20.19■□□□□ 0.82
EXTL3-211ENST00000522698 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
EXTL3-211ENST00000522698 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
EXTL3-211ENST00000522698 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
EXTL3-211ENST00000522698 KIAA1210Q9ULL0 1709 aa20.18■□□□□ 0.82
EXTL3-211ENST00000522698 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
EXTL3-211ENST00000522698 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
EXTL3-211ENST00000522698 FAM135BQ49AJ0 1406 aa20.17■□□□□ 0.82
EXTL3-211ENST00000522698 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
EXTL3-211ENST00000522698 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
EXTL3-211ENST00000522698 RBM33Q96EV2 1170 aaKnown RBP20.16■□□□□ 0.82
EXTL3-211ENST00000522698 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
EXTL3-211ENST00000522698 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
EXTL3-211ENST00000522698 SETD1AO15047 1707 aaKnown RBP20.16■□□□□ 0.82
EXTL3-211ENST00000522698 VGFO15240 615 aaPredicted RBP20.15■□□□□ 0.82
EXTL3-211ENST00000522698 RGS17Q9UGC6 210 aaPredicted RBP20.15■□□□□ 0.82
EXTL3-211ENST00000522698 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
EXTL3-211ENST00000522698 LAMC1P11047 1609 aa20.15■□□□□ 0.82
EXTL3-211ENST00000522698 KCNA6P17658 529 aa20.14■□□□□ 0.81
EXTL3-211ENST00000522698 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
EXTL3-211ENST00000522698 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
EXTL3-211ENST00000522698 NWD1Q149M9 1564 aa20.12■□□□□ 0.81
EXTL3-211ENST00000522698 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
EXTL3-211ENST00000522698 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
EXTL3-211ENST00000522698 ROBO1Q9Y6N7 1651 aa20.12■□□□□ 0.81
EXTL3-211ENST00000522698 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
EXTL3-211ENST00000522698 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
EXTL3-211ENST00000522698 BCANQ96GW7 911 aa20.1■□□□□ 0.81
EXTL3-211ENST00000522698 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
EXTL3-211ENST00000522698 DIP2AQ14689 1571 aa20.08■□□□□ 0.8
EXTL3-211ENST00000522698 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
EXTL3-211ENST00000522698 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
EXTL3-211ENST00000522698 ADGRB1O14514 1584 aa20.05■□□□□ 0.8
EXTL3-211ENST00000522698 C14orf93Q9H972 538 aaKnown RBP20.05■□□□□ 0.8
EXTL3-211ENST00000522698 MSH6P52701 1360 aa20.04■□□□□ 0.8
EXTL3-211ENST00000522698 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
EXTL3-211ENST00000522698 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
EXTL3-211ENST00000522698 POTEAQ6S8J7 498 aa20.02■□□□□ 0.8
EXTL3-211ENST00000522698 PHLPP1O60346 1717 aa20.02■□□□□ 0.79
EXTL3-211ENST00000522698 NBPF1Q3BBV0 1214 aa19.99■□□□□ 0.79
EXTL3-211ENST00000522698 CHD2O14647 1828 aaKnown RBP19.99■□□□□ 0.79
EXTL3-211ENST00000522698 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
EXTL3-211ENST00000522698 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
EXTL3-211ENST00000522698 TBX22Q9Y458 520 aa19.98■□□□□ 0.79
EXTL3-211ENST00000522698 METP08581 1390 aa19.96■□□□□ 0.79
EXTL3-211ENST00000522698 JCADQ9P266 1359 aa19.96■□□□□ 0.79
EXTL3-211ENST00000522698 SLAIN2Q9P270 581 aa19.96■□□□□ 0.79
EXTL3-211ENST00000522698 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
EXTL3-211ENST00000522698 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
EXTL3-211ENST00000522698 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
EXTL3-211ENST00000522698 TMEM132EQ6IEE7 984 aa19.93■□□□□ 0.78
EXTL3-211ENST00000522698 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
EXTL3-211ENST00000522698 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
EXTL3-211ENST00000522698 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
EXTL3-211ENST00000522698 LRPPRCP42704 1394 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms