RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
HMGB1P1-201ENST00000522557 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
HMGB1P1-201ENST00000522557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 IRF6O14896 467 aa10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
HMGB1P1-201ENST00000522557 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
HMGB1P1-201ENST00000522557 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
HMGB1P1-201ENST00000522557 ZMYND10O75800 440 aa10.48□□□□□ -0.73
HMGB1P1-201ENST00000522557 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 APLP1P51693 650 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
HMGB1P1-201ENST00000522557 SLC10A3P09131 477 aa10.45□□□□□ -0.74
HMGB1P1-201ENST00000522557 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P1-201ENST00000522557 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
HMGB1P1-201ENST00000522557 CFHP08603 1231 aa10.39□□□□□ -0.75
HMGB1P1-201ENST00000522557 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P1-201ENST00000522557 KCNC4Q03721 635 aa10.38□□□□□ -0.75
HMGB1P1-201ENST00000522557 MTRQ99707 1265 aa10.38□□□□□ -0.75
HMGB1P1-201ENST00000522557 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
HMGB1P1-201ENST00000522557 COPS2P61201 443 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 ZNF516Q92618 1163 aa10.36□□□□□ -0.75
HMGB1P1-201ENST00000522557 ACTN4O43707 911 aaKnown RBP10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 KMT5BQ4FZB7 885 aa10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
HMGB1P1-201ENST00000522557 REPIN1Q9BWE0 567 aaKnown RBP10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
HMGB1P1-201ENST00000522557 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
HMGB1P1-201ENST00000522557 TRIM66O15016 1216 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 CLCN1P35523 988 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 GCGRP47871 477 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 AK7Q96M32 723 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
HMGB1P1-201ENST00000522557 CD46P15529 392 aa10.3□□□□□ -0.76
HMGB1P1-201ENST00000522557 PUS10Q3MIT2 529 aaKnown RBP10.3□□□□□ -0.76
HMGB1P1-201ENST00000522557 A0A0G2JS52 829 aa10.29□□□□□ -0.76
HMGB1P1-201ENST00000522557 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
HMGB1P1-201ENST00000522557 ZPR1O75312 459 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 FUT2Q10981 343 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 AMHR2Q16671 573 aa10.28□□□□□ -0.76
HMGB1P1-201ENST00000522557 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P1-201ENST00000522557 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
HMGB1P1-201ENST00000522557 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 MORN1Q5T089 497 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
HMGB1P1-201ENST00000522557 TLL1O43897 1013 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 NR1I2O75469 434 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
HMGB1P1-201ENST00000522557 KDM4AO75164 1064 aa10.22□□□□□ -0.77
HMGB1P1-201ENST00000522557 PDE4DQ08499 809 aa10.22□□□□□ -0.77
HMGB1P1-201ENST00000522557 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
HMGB1P1-201ENST00000522557 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
HMGB1P1-201ENST00000522557 HLA-CQ95604 372 aa10.19□□□□□ -0.78
HMGB1P1-201ENST00000522557 MS4A1P11836 297 aa10.18□□□□□ -0.78
HMGB1P1-201ENST00000522557 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
HMGB1P1-201ENST00000522557 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
HMGB1P1-201ENST00000522557 ADH1BP00325 375 aa10.16□□□□□ -0.78
HMGB1P1-201ENST00000522557 THAP11Q96EK4 314 aa10.16□□□□□ -0.78
HMGB1P1-201ENST00000522557 USP46P62068 366 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 GUCA2AQ02747 115 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 SPIRE2Q8WWL2 714 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 SPSB2Q99619 263 aa10.15□□□□□ -0.78
HMGB1P1-201ENST00000522557 HOXA2O43364 376 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 S1PR4O95977 384 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
HMGB1P1-201ENST00000522557 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
HMGB1P1-201ENST00000522557 RNF223E7ERA6 249 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 RGS20O76081 388 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 GGCXP38435 758 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 SLC6A16Q9GZN6 736 aa10.12□□□□□ -0.79
HMGB1P1-201ENST00000522557 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P1-201ENST00000522557 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 NDUFV2P19404 249 aa10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P1-201ENST00000522557 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
HMGB1P1-201ENST00000522557 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
HMGB1P1-201ENST00000522557 Q3C1V9 767 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
HMGB1P1-201ENST00000522557 FDX1P10109 184 aa10.07□□□□□ -0.8
HMGB1P1-201ENST00000522557 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
HMGB1P1-201ENST00000522557 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms