RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 CHD2O14647 1828 aaKnown RBP13.71□□□□□ -0.22
CDKL3-208ENST00000522501 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
CDKL3-208ENST00000522501 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
CDKL3-208ENST00000522501 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
CDKL3-208ENST00000522501 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
CDKL3-208ENST00000522501 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
CDKL3-208ENST00000522501 LTKP29376 864 aa13.68□□□□□ -0.22
CDKL3-208ENST00000522501 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
CDKL3-208ENST00000522501 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
CDKL3-208ENST00000522501 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
CDKL3-208ENST00000522501 SHPRHQ149N8 1683 aa13.66□□□□□ -0.22
CDKL3-208ENST00000522501 KIF15Q9NS87 1388 aa13.66□□□□□ -0.22
CDKL3-208ENST00000522501 TXNDC2Q86VQ3 553 aa13.65□□□□□ -0.22
CDKL3-208ENST00000522501 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
CDKL3-208ENST00000522501 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
CDKL3-208ENST00000522501 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
CDKL3-208ENST00000522501 ABCC5O15440 1437 aa13.61□□□□□ -0.23
CDKL3-208ENST00000522501 NOS1P29475 1434 aa13.61□□□□□ -0.23
CDKL3-208ENST00000522501 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
CDKL3-208ENST00000522501 DAPK1P53355 1430 aa13.6□□□□□ -0.23
CDKL3-208ENST00000522501 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
CDKL3-208ENST00000522501 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
CDKL3-208ENST00000522501 LRP6O75581 1613 aa13.6□□□□□ -0.23
CDKL3-208ENST00000522501 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
CDKL3-208ENST00000522501 KANK1Q14678 1352 aa13.58□□□□□ -0.23
CDKL3-208ENST00000522501 DIP2AQ14689 1571 aa13.58□□□□□ -0.23
CDKL3-208ENST00000522501 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
CDKL3-208ENST00000522501 KCNA6P17658 529 aa13.58□□□□□ -0.24
CDKL3-208ENST00000522501 MSH6P52701 1360 aa13.58□□□□□ -0.24
CDKL3-208ENST00000522501 JCADQ9P266 1359 aa13.58□□□□□ -0.24
CDKL3-208ENST00000522501 RPRD2Q5VT52 1461 aaKnown RBP13.56□□□□□ -0.24
CDKL3-208ENST00000522501 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
CDKL3-208ENST00000522501 UNC13BO14795 1591 aa13.55□□□□□ -0.24
CDKL3-208ENST00000522501 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
CDKL3-208ENST00000522501 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
CDKL3-208ENST00000522501 E9PCH4 1651 aa13.54□□□□□ -0.24
CDKL3-208ENST00000522501 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
CDKL3-208ENST00000522501 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
CDKL3-208ENST00000522501 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
CDKL3-208ENST00000522501 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
CDKL3-208ENST00000522501 IDI1Q13907 227 aa13.53□□□□□ -0.24
CDKL3-208ENST00000522501 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
CDKL3-208ENST00000522501 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
CDKL3-208ENST00000522501 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.25
CDKL3-208ENST00000522501 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
CDKL3-208ENST00000522501 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
CDKL3-208ENST00000522501 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
CDKL3-208ENST00000522501 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
CDKL3-208ENST00000522501 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
CDKL3-208ENST00000522501 TRPM2O94759 1503 aa13.49□□□□□ -0.25
CDKL3-208ENST00000522501 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
CDKL3-208ENST00000522501 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
CDKL3-208ENST00000522501 CAPN15O75808 1086 aa13.49□□□□□ -0.25
CDKL3-208ENST00000522501 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
CDKL3-208ENST00000522501 IQGAP3Q86VI3 1631 aa13.49□□□□□ -0.25
CDKL3-208ENST00000522501 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
CDKL3-208ENST00000522501 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
CDKL3-208ENST00000522501 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.25
CDKL3-208ENST00000522501 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.25
CDKL3-208ENST00000522501 DCCP43146 1447 aa13.45□□□□□ -0.26
CDKL3-208ENST00000522501 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
CDKL3-208ENST00000522501 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDKL3-208ENST00000522501 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
CDKL3-208ENST00000522501 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
CDKL3-208ENST00000522501 LAMC1P11047 1609 aa13.43□□□□□ -0.26
CDKL3-208ENST00000522501 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
CDKL3-208ENST00000522501 ANKRD50Q9ULJ7 1429 aa13.43□□□□□ -0.26
CDKL3-208ENST00000522501 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
CDKL3-208ENST00000522501 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
CDKL3-208ENST00000522501 BCANQ96GW7 911 aa13.41□□□□□ -0.26
CDKL3-208ENST00000522501 RGS12O14924 1447 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 PTPRUQ92729 1446 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 CHIC2Q9UKJ5 165 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
CDKL3-208ENST00000522501 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
CDKL3-208ENST00000522501 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
CDKL3-208ENST00000522501 MST1RQ04912 1400 aa13.39□□□□□ -0.27
CDKL3-208ENST00000522501 POLA2Q14181 598 aa13.37□□□□□ -0.27
CDKL3-208ENST00000522501 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
CDKL3-208ENST00000522501 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
CDKL3-208ENST00000522501 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
CDKL3-208ENST00000522501 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
CDKL3-208ENST00000522501 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
CDKL3-208ENST00000522501 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDKL3-208ENST00000522501 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
CDKL3-208ENST00000522501 EP400Q96L91 3159 aa13.35□□□□□ -0.27
CDKL3-208ENST00000522501 ATF3P18847 181 aa13.35□□□□□ -0.27
CDKL3-208ENST00000522501 RXRBP28702 533 aa13.35□□□□□ -0.27
CDKL3-208ENST00000522501 AFF2P51816 1311 aa13.35□□□□□ -0.27
CDKL3-208ENST00000522501 KIF1BO60333 1816 aa13.34□□□□□ -0.27
CDKL3-208ENST00000522501 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
CDKL3-208ENST00000522501 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
CDKL3-208ENST00000522501 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
CDKL3-208ENST00000522501 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
CDKL3-208ENST00000522501 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
CDKL3-208ENST00000522501 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
CDKL3-208ENST00000522501 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
CDKL3-208ENST00000522501 NUTM2BA6NNL0 878 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms