RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
PDGFRB-210ENST00000522466 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
PDGFRB-210ENST00000522466 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
PDGFRB-210ENST00000522466 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
PDGFRB-210ENST00000522466 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
PDGFRB-210ENST00000522466 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
PDGFRB-210ENST00000522466 KANK1Q14678 1352 aa12.71□□□□□ -0.37
PDGFRB-210ENST00000522466 KDM5AP29375 1690 aaKnown RBP12.71□□□□□ -0.37
PDGFRB-210ENST00000522466 RXRBP28702 533 aa12.71□□□□□ -0.37
PDGFRB-210ENST00000522466 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.38
PDGFRB-210ENST00000522466 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
PDGFRB-210ENST00000522466 ADGRB3O60242 1522 aa12.7□□□□□ -0.38
PDGFRB-210ENST00000522466 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
PDGFRB-210ENST00000522466 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-210ENST00000522466 CROCC2H7BZ55 1655 aa12.69□□□□□ -0.38
PDGFRB-210ENST00000522466 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
PDGFRB-210ENST00000522466 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-210ENST00000522466 ABCC5O15440 1437 aa12.68□□□□□ -0.38
PDGFRB-210ENST00000522466 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
PDGFRB-210ENST00000522466 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.67□□□□□ -0.38
PDGFRB-210ENST00000522466 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
PDGFRB-210ENST00000522466 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-210ENST00000522466 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
PDGFRB-210ENST00000522466 AFF2P51816 1311 aa12.65□□□□□ -0.38
PDGFRB-210ENST00000522466 NOS1P29475 1434 aa12.65□□□□□ -0.38
PDGFRB-210ENST00000522466 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
PDGFRB-210ENST00000522466 ATF3P18847 181 aa12.65□□□□□ -0.38
PDGFRB-210ENST00000522466 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
PDGFRB-210ENST00000522466 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-210ENST00000522466 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
PDGFRB-210ENST00000522466 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
PDGFRB-210ENST00000522466 DAPK1P53355 1430 aa12.63□□□□□ -0.39
PDGFRB-210ENST00000522466 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
PDGFRB-210ENST00000522466 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 BRINP3Q76B58 766 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 SLC52A1Q9NWF4 448 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 RGS12O14924 1447 aa12.62□□□□□ -0.39
PDGFRB-210ENST00000522466 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-210ENST00000522466 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-210ENST00000522466 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
PDGFRB-210ENST00000522466 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
PDGFRB-210ENST00000522466 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
PDGFRB-210ENST00000522466 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
PDGFRB-210ENST00000522466 HDGFP51858 240 aaKnown RBP12.59□□□□□ -0.39
PDGFRB-210ENST00000522466 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
PDGFRB-210ENST00000522466 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
PDGFRB-210ENST00000522466 ADAMTS13Q76LX8 1427 aa12.58□□□□□ -0.4
PDGFRB-210ENST00000522466 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
PDGFRB-210ENST00000522466 NCOA3Q9Y6Q9 1424 aa12.58□□□□□ -0.4
PDGFRB-210ENST00000522466 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
PDGFRB-210ENST00000522466 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
PDGFRB-210ENST00000522466 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
PDGFRB-210ENST00000522466 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDGFRB-210ENST00000522466 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
PDGFRB-210ENST00000522466 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
PDGFRB-210ENST00000522466 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
PDGFRB-210ENST00000522466 TRPM2O94759 1503 aa12.53□□□□□ -0.4
PDGFRB-210ENST00000522466 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-210ENST00000522466 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
PDGFRB-210ENST00000522466 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-210ENST00000522466 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
PDGFRB-210ENST00000522466 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
PDGFRB-210ENST00000522466 MST1RQ04912 1400 aa12.52□□□□□ -0.41
PDGFRB-210ENST00000522466 APLP2Q06481 763 aa12.51□□□□□ -0.41
PDGFRB-210ENST00000522466 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-210ENST00000522466 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
PDGFRB-210ENST00000522466 PIK3R4Q99570 1358 aa12.51□□□□□ -0.41
PDGFRB-210ENST00000522466 E9PCH4 1651 aa12.51□□□□□ -0.41
PDGFRB-210ENST00000522466 USP21Q9UK80 565 aa12.5□□□□□ -0.41
PDGFRB-210ENST00000522466 ANKRD50Q9ULJ7 1429 aa12.5□□□□□ -0.41
PDGFRB-210ENST00000522466 UNC13BO14795 1591 aa12.5□□□□□ -0.41
PDGFRB-210ENST00000522466 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
PDGFRB-210ENST00000522466 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-210ENST00000522466 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
PDGFRB-210ENST00000522466 ADGRL2O95490 1459 aa12.47□□□□□ -0.41
PDGFRB-210ENST00000522466 DCCP43146 1447 aa12.47□□□□□ -0.41
PDGFRB-210ENST00000522466 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
PDGFRB-210ENST00000522466 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-210ENST00000522466 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.41
PDGFRB-210ENST00000522466 METP08581 1390 aa12.45□□□□□ -0.42
PDGFRB-210ENST00000522466 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
PDGFRB-210ENST00000522466 ADGRL3Q9HAR2 1447 aa12.44□□□□□ -0.42
PDGFRB-210ENST00000522466 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
PDGFRB-210ENST00000522466 ATRNO75882 1429 aa12.43□□□□□ -0.42
PDGFRB-210ENST00000522466 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-210ENST00000522466 NUP155O75694 1391 aa12.4□□□□□ -0.42
PDGFRB-210ENST00000522466 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
PDGFRB-210ENST00000522466 SOS2Q07890 1332 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-210ENST00000522466 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-210ENST00000522466 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
PDGFRB-210ENST00000522466 PTCH1Q13635 1447 aa12.38□□□□□ -0.43
PDGFRB-210ENST00000522466 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-210ENST00000522466 ITGAEP38570 1179 aa12.37□□□□□ -0.43
PDGFRB-210ENST00000522466 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
PDGFRB-210ENST00000522466 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-210ENST00000522466 LAMC1P11047 1609 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms